data_3VP0 # _model_server_result.job_id gG5RwYjN95j0H3RbFaQWRA _model_server_result.datetime_utc '2024-11-14 17:19:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vp0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 3VP0 # _exptl.entry_id 3VP0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 146.144 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3VP0 _cell.length_a 139.736 _cell.length_b 139.736 _cell.length_c 156.648 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VP0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H10 N2 O3' _chem_comp.formula_weight 146.144 _chem_comp.id GLN _chem_comp.mon_nstd_flag y _chem_comp.name GLUTAMINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLN sing 83 n n N H GLN sing 84 n n N H2 GLN sing 85 n n CA C GLN sing 86 n n CA CB GLN sing 87 n n CA HA GLN sing 88 n n C O GLN doub 89 n n C OXT GLN sing 90 n n CB CG GLN sing 91 n n CB HB2 GLN sing 92 n n CB HB3 GLN sing 93 n n CG CD GLN sing 94 n n CG HG2 GLN sing 95 n n CG HG3 GLN sing 96 n n CD OE1 GLN doub 97 n n CD NE2 GLN sing 98 n n NE2 HE21 GLN sing 99 n n NE2 HE22 GLN sing 100 n n OXT HXT GLN sing 101 n n # _atom_sites.entry_id 3VP0 _atom_sites.fract_transf_matrix[1][1] 0.007156 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006384 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLN A 1 601 1 GLN GLN . C 3 SO4 A 1 602 700 SO4 SO4 . D 3 SO4 A 1 603 701 SO4 SO4 . E 4 HOH A 1 701 601 HOH HOH . E 4 HOH A 2 702 602 HOH HOH . E 4 HOH A 3 703 603 HOH HOH . E 4 HOH A 4 704 604 HOH HOH . E 4 HOH A 5 705 605 HOH HOH . E 4 HOH A 6 706 606 HOH HOH . E 4 HOH A 7 707 607 HOH HOH . E 4 HOH A 8 708 608 HOH HOH . E 4 HOH A 9 709 609 HOH HOH . E 4 HOH A 10 710 610 HOH HOH . E 4 HOH A 11 711 611 HOH HOH . E 4 HOH A 12 712 612 HOH HOH . E 4 HOH A 13 713 613 HOH HOH . E 4 HOH A 14 714 614 HOH HOH . E 4 HOH A 15 715 615 HOH HOH . E 4 HOH A 16 716 616 HOH HOH . E 4 HOH A 17 717 617 HOH HOH . E 4 HOH A 18 718 618 HOH HOH . E 4 HOH A 19 719 619 HOH HOH . E 4 HOH A 20 720 620 HOH HOH . E 4 HOH A 21 721 621 HOH HOH . E 4 HOH A 22 722 622 HOH HOH . E 4 HOH A 23 723 623 HOH HOH . E 4 HOH A 24 724 624 HOH HOH . E 4 HOH A 25 725 625 HOH HOH . E 4 HOH A 26 726 626 HOH HOH . E 4 HOH A 27 727 627 HOH HOH . E 4 HOH A 28 728 628 HOH HOH . E 4 HOH A 29 729 629 HOH HOH . E 4 HOH A 30 730 630 HOH HOH . E 4 HOH A 31 731 631 HOH HOH . E 4 HOH A 32 732 632 HOH HOH . E 4 HOH A 33 733 633 HOH HOH . E 4 HOH A 34 734 634 HOH HOH . E 4 HOH A 35 735 635 HOH HOH . E 4 HOH A 36 736 636 HOH HOH . E 4 HOH A 37 737 637 HOH HOH . E 4 HOH A 38 738 638 HOH HOH . E 4 HOH A 39 739 639 HOH HOH . E 4 HOH A 40 740 640 HOH HOH . E 4 HOH A 41 741 641 HOH HOH . E 4 HOH A 42 742 642 HOH HOH . E 4 HOH A 43 743 643 HOH HOH . E 4 HOH A 44 744 644 HOH HOH . E 4 HOH A 45 745 645 HOH HOH . E 4 HOH A 46 746 646 HOH HOH . E 4 HOH A 47 747 647 HOH HOH . E 4 HOH A 48 748 648 HOH HOH . E 4 HOH A 49 749 649 HOH HOH . E 4 HOH A 50 750 650 HOH HOH . E 4 HOH A 51 751 651 HOH HOH . E 4 HOH A 52 752 652 HOH HOH . E 4 HOH A 53 753 653 HOH HOH . E 4 HOH A 54 754 654 HOH HOH . E 4 HOH A 55 755 655 HOH HOH . E 4 HOH A 56 756 656 HOH HOH . E 4 HOH A 57 757 657 HOH HOH . E 4 HOH A 58 758 658 HOH HOH . E 4 HOH A 59 759 659 HOH HOH . E 4 HOH A 60 760 660 HOH HOH . E 4 HOH A 61 761 661 HOH HOH . E 4 HOH A 62 762 662 HOH HOH . E 4 HOH A 63 763 663 HOH HOH . E 4 HOH A 64 764 664 HOH HOH . E 4 HOH A 65 765 665 HOH HOH . E 4 HOH A 66 766 666 HOH HOH . E 4 HOH A 67 767 667 HOH HOH . E 4 HOH A 68 768 668 HOH HOH . E 4 HOH A 69 769 669 HOH HOH . E 4 HOH A 70 770 670 HOH HOH . E 4 HOH A 71 771 671 HOH HOH . E 4 HOH A 72 772 672 HOH HOH . E 4 HOH A 73 773 673 HOH HOH . E 4 HOH A 74 774 674 HOH HOH . E 4 HOH A 75 775 675 HOH HOH . E 4 HOH A 76 776 676 HOH HOH . E 4 HOH A 77 777 678 HOH HOH . E 4 HOH A 78 778 679 HOH HOH . E 4 HOH A 79 779 680 HOH HOH . E 4 HOH A 80 780 681 HOH HOH . E 4 HOH A 81 781 682 HOH HOH . E 4 HOH A 82 782 683 HOH HOH . E 4 HOH A 83 783 684 HOH HOH . E 4 HOH A 84 784 685 HOH HOH . E 4 HOH A 85 785 686 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLN . . . B 2 21.085 -8.816 -13.401 1 67.26 ? N GLN 601 A 1 HETATM 2 C CA GLN . . . B 2 20.316 -7.884 -12.524 1 67.85 ? CA GLN 601 A 1 HETATM 3 C C GLN . . . B 2 19.056 -8.559 -11.985 1 68.22 ? C GLN 601 A 1 HETATM 4 O O GLN . . . B 2 18.512 -8.067 -10.971 1 70.27 ? O GLN 601 A 1 HETATM 5 C CB GLN . . . B 2 19.941 -6.6 -13.291 1 65.77 ? CB GLN 601 A 1 HETATM 6 C CG GLN . . . B 2 19.058 -6.8 -14.524 1 61.57 ? CG GLN 601 A 1 HETATM 7 C CD GLN . . . B 2 18.681 -5.482 -15.183 1 61.25 ? CD GLN 601 A 1 HETATM 8 O OE1 GLN . . . B 2 18.109 -4.599 -14.544 1 62.12 ? OE1 GLN 601 A 1 HETATM 9 N NE2 GLN . . . B 2 18.996 -5.344 -16.467 1 59.66 ? NE2 GLN 601 A 1 HETATM 10 O OXT GLN . . . B 2 18.633 -9.579 -12.577 1 61.5 ? OXT GLN 601 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 212 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #