data_3VQ5
#
_model_server_result.job_id            AiSEWAmJgyPEvxIYmLulaA 
_model_server_result.datetime_utc      '2024-11-14 23:21:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3vq5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1007}' 
#
_entry.id    3VQ5 
#
_exptl.entry_id    3VQ5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              218.318 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-methyl-1-(4-methyl-2-phenyl-1,3-thiazol-5-yl)methanamine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3VQ5 
_cell.length_a            49.13 
_cell.length_b            49.13 
_cell.length_c            103.05 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VQ5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 10 A CYS 65 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc2 A SG CYS 10 A CYS 65 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? 
metalc ? metalc3 A NE2 HIS 12 A HIS 67 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc4 A OE2 GLU 37 A GLU 92 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? 
metalc ? metalc5 A OD2 ASP 61 A ASP 116 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc6 D CD CD . A CD 1002 1_555 Q O HOH . A HOH 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc7 D CD CD . A CD 1002 1_555 Q O HOH . A HOH 1106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc8 B SG CYS 10 B CYS 65 1_555 J CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? 
metalc ? metalc9 B SG CYS 10 B CYS 65 1_555 K CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? 
metalc ? metalc10 B NE2 HIS 12 B HIS 67 1_555 J CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc11 B OE1 GLU 37 B GLU 92 1_555 J CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? 
metalc ? metalc12 B OE2 GLU 37 B GLU 92 1_555 K CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? 
metalc ? metalc13 B OD2 ASP 61 B ASP 116 1_555 K CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? 
metalc ? metalc14 K CD CD . B CD 302 1_555 R O HOH . B HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc15 K CD CD . B CD 302 1_555 R O HOH . B HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
#
_chem_comp.formula           'C12 H14 N2 S' 
_chem_comp.formula_weight    218.318 
_chem_comp.id                MMJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-methyl-1-(4-methyl-2-phenyl-1,3-thiazol-5-yl)methanamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 C10 MMJ sing 237 n n 
C10 N11 MMJ sing 238 n y 
C10 C9 MMJ doub 239 n y 
N11 C7 MMJ doub 240 n y 
C9 C12 MMJ sing 241 n n 
C9 S8 MMJ sing 242 n y 
C12 N13 MMJ sing 243 n n 
C7 C2 MMJ sing 244 n n 
C7 S8 MMJ sing 245 n y 
C3 C4 MMJ doub 246 n y 
C3 C2 MMJ sing 247 n y 
C4 C5 MMJ sing 248 n y 
C2 C1 MMJ doub 249 n y 
N13 C14 MMJ sing 250 n n 
C5 C6 MMJ doub 251 n y 
C1 C6 MMJ sing 252 n y 
C15 H1 MMJ sing 253 n n 
C15 H2 MMJ sing 254 n n 
C15 H3 MMJ sing 255 n n 
C12 H4 MMJ sing 256 n n 
C12 H5 MMJ sing 257 n n 
N13 H6 MMJ sing 258 n n 
C14 H8 MMJ sing 259 n n 
C14 H9 MMJ sing 260 n n 
C14 H10 MMJ sing 261 n n 
C3 H11 MMJ sing 262 n n 
C4 H12 MMJ sing 263 n n 
C5 H13 MMJ sing 264 n n 
C6 H14 MMJ sing 265 n n 
C1 H15 MMJ sing 266 n n 
#
_atom_sites.entry_id                     3VQ5 
_atom_sites.fract_transf_matrix[1][1]    0.020354 
_atom_sites.fract_transf_matrix[1][2]    0.011751 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023503 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009704 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CD A 1 1001 1001 CD CD . 
D 2 CD A 1 1002 1002 CD CD . 
E 3 CL A 1 1003 501 CL CL . 
F 4 SO4 A 1 1004 750 SO4 SO4 . 
G 4 SO4 A 1 1005 753 SO4 SO4 . 
H 4 SO4 A 1 1006 754 SO4 SO4 . 
I 5 MMJ A 1 1007 1 MMJ 246 . 
J 2 CD B 1 301 1003 CD CD . 
K 2 CD B 1 302 1004 CD CD . 
L 3 CL B 1 303 502 CL CL . 
M 4 SO4 B 1 304 751 SO4 SO4 . 
N 4 SO4 B 1 305 752 SO4 SO4 . 
O 4 SO4 B 1 306 755 SO4 SO4 . 
P 5 MMJ B 1 307 1 MMJ 246 . 
Q 6 HOH A 1 1101 3 HOH HOH . 
Q 6 HOH A 2 1102 4 HOH HOH . 
Q 6 HOH A 3 1103 8 HOH HOH . 
Q 6 HOH A 4 1104 9 HOH HOH . 
Q 6 HOH A 5 1105 10 HOH HOH . 
Q 6 HOH A 6 1106 15 HOH HOH . 
Q 6 HOH A 7 1107 19 HOH HOH . 
Q 6 HOH A 8 1108 20 HOH HOH . 
Q 6 HOH A 9 1109 21 HOH HOH . 
Q 6 HOH A 10 1110 22 HOH HOH . 
Q 6 HOH A 11 1111 23 HOH HOH . 
Q 6 HOH A 12 1112 25 HOH HOH . 
Q 6 HOH A 13 1113 26 HOH HOH . 
Q 6 HOH A 14 1114 28 HOH HOH . 
Q 6 HOH A 15 1115 29 HOH HOH . 
Q 6 HOH A 16 1116 30 HOH HOH . 
Q 6 HOH A 17 1117 32 HOH HOH . 
Q 6 HOH A 18 1118 37 HOH HOH . 
Q 6 HOH A 19 1119 43 HOH HOH . 
Q 6 HOH A 20 1120 44 HOH HOH . 
Q 6 HOH A 21 1121 46 HOH HOH . 
Q 6 HOH A 22 1122 49 HOH HOH . 
Q 6 HOH A 23 1123 50 HOH HOH . 
Q 6 HOH A 24 1124 51 HOH HOH . 
Q 6 HOH A 25 1125 52 HOH HOH . 
Q 6 HOH A 26 1126 53 HOH HOH . 
Q 6 HOH A 27 1127 55 HOH HOH . 
Q 6 HOH A 28 1128 56 HOH HOH . 
Q 6 HOH A 29 1129 57 HOH HOH . 
Q 6 HOH A 30 1130 59 HOH HOH . 
Q 6 HOH A 31 1131 60 HOH HOH . 
Q 6 HOH A 32 1132 62 HOH HOH . 
Q 6 HOH A 33 1133 63 HOH HOH . 
Q 6 HOH A 34 1134 64 HOH HOH . 
Q 6 HOH A 35 1135 65 HOH HOH . 
Q 6 HOH A 36 1136 68 HOH HOH . 
Q 6 HOH A 37 1137 69 HOH HOH . 
Q 6 HOH A 38 1138 73 HOH HOH . 
Q 6 HOH A 39 1139 77 HOH HOH . 
Q 6 HOH A 40 1140 79 HOH HOH . 
Q 6 HOH A 41 1141 80 HOH HOH . 
Q 6 HOH A 42 1142 83 HOH HOH . 
Q 6 HOH A 43 1143 84 HOH HOH . 
Q 6 HOH A 44 1144 91 HOH HOH . 
Q 6 HOH A 45 1145 92 HOH HOH . 
Q 6 HOH A 46 1146 94 HOH HOH . 
Q 6 HOH A 47 1147 96 HOH HOH . 
Q 6 HOH A 48 1148 100 HOH HOH . 
Q 6 HOH A 49 1149 101 HOH HOH . 
Q 6 HOH A 50 1150 102 HOH HOH . 
Q 6 HOH A 51 1151 103 HOH HOH . 
R 6 HOH B 1 401 1 HOH HOH . 
R 6 HOH B 2 402 2 HOH HOH . 
R 6 HOH B 3 403 5 HOH HOH . 
R 6 HOH B 4 404 6 HOH HOH . 
R 6 HOH B 5 405 7 HOH HOH . 
R 6 HOH B 6 406 11 HOH HOH . 
R 6 HOH B 7 407 12 HOH HOH . 
R 6 HOH B 8 408 13 HOH HOH . 
R 6 HOH B 9 409 14 HOH HOH . 
R 6 HOH B 10 410 16 HOH HOH . 
R 6 HOH B 11 411 17 HOH HOH . 
R 6 HOH B 12 412 18 HOH HOH . 
R 6 HOH B 13 413 24 HOH HOH . 
R 6 HOH B 14 414 27 HOH HOH . 
R 6 HOH B 15 415 31 HOH HOH . 
R 6 HOH B 16 416 33 HOH HOH . 
R 6 HOH B 17 417 34 HOH HOH . 
R 6 HOH B 18 418 35 HOH HOH . 
R 6 HOH B 19 419 36 HOH HOH . 
R 6 HOH B 20 420 38 HOH HOH . 
R 6 HOH B 21 421 39 HOH HOH . 
R 6 HOH B 22 422 40 HOH HOH . 
R 6 HOH B 23 423 41 HOH HOH . 
R 6 HOH B 24 424 42 HOH HOH . 
R 6 HOH B 25 425 45 HOH HOH . 
R 6 HOH B 26 426 47 HOH HOH . 
R 6 HOH B 27 427 48 HOH HOH . 
R 6 HOH B 28 428 54 HOH HOH . 
R 6 HOH B 29 429 58 HOH HOH . 
R 6 HOH B 30 430 61 HOH HOH . 
R 6 HOH B 31 431 66 HOH HOH . 
R 6 HOH B 32 432 67 HOH HOH . 
R 6 HOH B 33 433 70 HOH HOH . 
R 6 HOH B 34 434 71 HOH HOH . 
R 6 HOH B 35 435 72 HOH HOH . 
R 6 HOH B 36 436 74 HOH HOH . 
R 6 HOH B 37 437 75 HOH HOH . 
R 6 HOH B 38 438 76 HOH HOH . 
R 6 HOH B 39 439 78 HOH HOH . 
R 6 HOH B 40 440 81 HOH HOH . 
R 6 HOH B 41 441 82 HOH HOH . 
R 6 HOH B 42 442 85 HOH HOH . 
R 6 HOH B 43 443 86 HOH HOH . 
R 6 HOH B 44 444 87 HOH HOH . 
R 6 HOH B 45 445 88 HOH HOH . 
R 6 HOH B 46 446 89 HOH HOH . 
R 6 HOH B 47 447 90 HOH HOH . 
R 6 HOH B 48 448 93 HOH HOH . 
R 6 HOH B 49 449 95 HOH HOH . 
R 6 HOH B 50 450 97 HOH HOH . 
R 6 HOH B 51 451 98 HOH HOH . 
R 6 HOH B 52 452 99 HOH HOH . 
R 6 HOH B 53 453 104 HOH HOH . 
R 6 HOH B 54 454 105 HOH HOH . 
R 6 HOH B 55 455 106 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C15 MMJ . . . I 5 1.197 19.987 9.313 1 39.9 ? C15 MMJ 1007 A 1 
HETATM 2 C C10 MMJ . . . I 5 0.461 19.574 8.044 1 39.04 ? C10 MMJ 1007 A 1 
HETATM 3 C C9 MMJ . . . I 5 0.1 20.513 6.927 1 39.31 ? C9 MMJ 1007 A 1 
HETATM 4 C C12 MMJ . . . I 5 0.228 22.018 6.636 1 40.54 ? C12 MMJ 1007 A 1 
HETATM 5 N N13 MMJ . . . I 5 1.325 22.464 5.751 1 42.32 ? N13 MMJ 1007 A 1 
HETATM 6 C C14 MMJ . . . I 5 1.256 22.432 4.268 1 37.36 ? C14 MMJ 1007 A 1 
HETATM 7 S S8 MMJ . . . I 5 -0.702 19.551 5.711 1 45.15 ? S8 MMJ 1007 A 1 
HETATM 8 N N11 MMJ . . . I 5 0.113 18.252 7.768 1 41.46 ? N11 MMJ 1007 A 1 
HETATM 9 C C7 MMJ . . . I 5 -0.51 18.056 6.547 1 37.47 ? C7 MMJ 1007 A 1 
HETATM 10 C C2 MMJ . . . I 5 -1.077 16.838 5.898 1 35.1 ? C2 MMJ 1007 A 1 
HETATM 11 C C3 MMJ . . . I 5 -0.703 15.594 6.442 1 30.8 ? C3 MMJ 1007 A 1 
HETATM 12 C C4 MMJ . . . I 5 -1.198 14.394 5.928 1 30.89 ? C4 MMJ 1007 A 1 
HETATM 13 C C5 MMJ . . . I 5 -2.099 14.418 4.863 1 27.86 ? C5 MMJ 1007 A 1 
HETATM 14 C C6 MMJ . . . I 5 -2.444 15.675 4.322 1 23.77 ? C6 MMJ 1007 A 1 
HETATM 15 C C1 MMJ . . . I 5 -1.95 16.898 4.789 1 30.12 ? C1 MMJ 1007 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           15 
#