data_3VQ6 # _model_server_result.job_id 5u8tu9fDXd5U6NGs1k4JJg _model_server_result.datetime_utc '2024-11-26 23:09:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vq6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 3VQ6 # _exptl.entry_id 3VQ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 188.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1-methyl-5-phenyl-1H-pyrazol-4-yl)methanol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3VQ6 _cell.length_a 60.452 _cell.length_b 61.928 _cell.length_c 81.674 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VQ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 11 A CYS 65 1_555 C CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc2 A SG CYS 11 A CYS 65 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc3 A NE2 HIS 13 A HIS 67 1_555 C CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc4 A OE1 GLU 38 A GLU 92 1_555 C CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.76 ? metalc ? metalc5 A OE2 GLU 38 A GLU 92 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc6 A OD2 ASP 62 A ASP 116 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc7 C CD CD . A CD 301 1_555 I O HOH . A HOH 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.888 ? metalc ? metalc8 D CD CD . A CD 302 1_555 I O HOH . A HOH 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc9 B SG CYS 11 B CYS 65 1_555 G CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc10 B SG CYS 11 B CYS 65 1_555 H CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc11 B NE2 HIS 13 B HIS 67 1_555 H CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc12 B OE2 GLU 38 B GLU 92 1_555 G CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc13 B OE1 GLU 38 B GLU 92 1_555 H CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc14 B OD1 ASP 62 B ASP 116 1_555 G CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? metalc ? metalc15 H CD CD . B CD 302 1_555 J O HOH . B HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? # _chem_comp.formula 'C11 H12 N2 O' _chem_comp.formula_weight 188.226 _chem_comp.id BCK _chem_comp.mon_nstd_flag . _chem_comp.name (1-methyl-5-phenyl-1H-pyrazol-4-yl)methanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 O13 BCK sing 70 n n C12 C3 BCK sing 71 n n C4 C3 BCK sing 72 n y C4 N5 BCK doub 73 n y C3 C2 BCK doub 74 n y N5 N1 BCK sing 75 n y C2 N1 BCK sing 76 n y C2 C6 BCK sing 77 n n C7 C6 BCK doub 78 n y C7 C8 BCK sing 79 n y N1 C14 BCK sing 80 n n C6 C11 BCK sing 81 n y C8 C9 BCK doub 82 n y C11 C10 BCK doub 83 n y C9 C10 BCK sing 84 n y O13 H1 BCK sing 85 n n C12 H2 BCK sing 86 n n C12 H3 BCK sing 87 n n C4 H4 BCK sing 88 n n C14 H5 BCK sing 89 n n C14 H6 BCK sing 90 n n C14 H7 BCK sing 91 n n C11 H8 BCK sing 92 n n C10 H9 BCK sing 93 n n C9 H10 BCK sing 94 n n C8 H11 BCK sing 95 n n C7 H12 BCK sing 96 n n # _atom_sites.entry_id 3VQ6 _atom_sites.fract_transf_matrix[1][1] 0.016542 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012244 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 301 3 CD CD . D 2 CD A 1 302 4 CD CD . E 3 BCK A 1 303 1 BCK BCA . F 4 SO4 A 1 304 2 SO4 SO4 . G 2 CD B 1 301 1 CD CD . H 2 CD B 1 302 2 CD CD . I 5 HOH A 1 401 1 HOH HOH . I 5 HOH A 2 402 2 HOH HOH . I 5 HOH A 3 403 3 HOH HOH . I 5 HOH A 4 404 6 HOH HOH . I 5 HOH A 5 405 9 HOH HOH . I 5 HOH A 6 406 11 HOH HOH . I 5 HOH A 7 407 15 HOH HOH . I 5 HOH A 8 408 18 HOH HOH . I 5 HOH A 9 409 20 HOH HOH . I 5 HOH A 10 410 21 HOH HOH . I 5 HOH A 11 411 24 HOH HOH . I 5 HOH A 12 412 25 HOH HOH . I 5 HOH A 13 413 26 HOH HOH . I 5 HOH A 14 414 30 HOH HOH . I 5 HOH A 15 415 31 HOH HOH . I 5 HOH A 16 416 33 HOH HOH . I 5 HOH A 17 417 36 HOH HOH . I 5 HOH A 18 418 39 HOH HOH . I 5 HOH A 19 419 40 HOH HOH . I 5 HOH A 20 420 41 HOH HOH . I 5 HOH A 21 421 46 HOH HOH . I 5 HOH A 22 422 47 HOH HOH . I 5 HOH A 23 423 51 HOH HOH . I 5 HOH A 24 424 53 HOH HOH . I 5 HOH A 25 425 57 HOH HOH . I 5 HOH A 26 426 58 HOH HOH . I 5 HOH A 27 427 61 HOH HOH . I 5 HOH A 28 428 63 HOH HOH . I 5 HOH A 29 429 64 HOH HOH . I 5 HOH A 30 430 67 HOH HOH . I 5 HOH A 31 431 68 HOH HOH . I 5 HOH A 32 432 69 HOH HOH . I 5 HOH A 33 433 70 HOH HOH . I 5 HOH A 34 434 71 HOH HOH . I 5 HOH A 35 435 72 HOH HOH . I 5 HOH A 36 436 73 HOH HOH . I 5 HOH A 37 437 80 HOH HOH . I 5 HOH A 38 438 82 HOH HOH . I 5 HOH A 39 439 84 HOH HOH . I 5 HOH A 40 440 77 HOH HOH . J 5 HOH B 1 401 4 HOH HOH . J 5 HOH B 2 402 5 HOH HOH . J 5 HOH B 3 403 7 HOH HOH . J 5 HOH B 4 404 8 HOH HOH . J 5 HOH B 5 405 10 HOH HOH . J 5 HOH B 6 406 12 HOH HOH . J 5 HOH B 7 407 13 HOH HOH . J 5 HOH B 8 408 14 HOH HOH . J 5 HOH B 9 409 16 HOH HOH . J 5 HOH B 10 410 17 HOH HOH . J 5 HOH B 11 411 19 HOH HOH . J 5 HOH B 12 412 22 HOH HOH . J 5 HOH B 13 413 23 HOH HOH . J 5 HOH B 14 414 27 HOH HOH . J 5 HOH B 15 415 28 HOH HOH . J 5 HOH B 16 416 29 HOH HOH . J 5 HOH B 17 417 32 HOH HOH . J 5 HOH B 18 418 34 HOH HOH . J 5 HOH B 19 419 35 HOH HOH . J 5 HOH B 20 420 37 HOH HOH . J 5 HOH B 21 421 38 HOH HOH . J 5 HOH B 22 422 42 HOH HOH . J 5 HOH B 23 423 43 HOH HOH . J 5 HOH B 24 424 44 HOH HOH . J 5 HOH B 25 425 45 HOH HOH . J 5 HOH B 26 426 48 HOH HOH . J 5 HOH B 27 427 49 HOH HOH . J 5 HOH B 28 428 50 HOH HOH . J 5 HOH B 29 429 52 HOH HOH . J 5 HOH B 30 430 54 HOH HOH . J 5 HOH B 31 431 55 HOH HOH . J 5 HOH B 32 432 56 HOH HOH . J 5 HOH B 33 433 59 HOH HOH . J 5 HOH B 34 434 60 HOH HOH . J 5 HOH B 35 435 62 HOH HOH . J 5 HOH B 36 436 65 HOH HOH . J 5 HOH B 37 437 66 HOH HOH . J 5 HOH B 38 438 74 HOH HOH . J 5 HOH B 39 439 75 HOH HOH . J 5 HOH B 40 440 76 HOH HOH . J 5 HOH B 41 441 78 HOH HOH . J 5 HOH B 42 442 79 HOH HOH . J 5 HOH B 43 443 81 HOH HOH . J 5 HOH B 44 444 83 HOH HOH . J 5 HOH B 45 445 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O13 BCK . . . E 3 31.576 7.461 18.135 1 52.87 ? O13 BCK 303 A 1 HETATM 2 C C12 BCK . . . E 3 32.608 6.855 17.341 1 39.31 ? C12 BCK 303 A 1 HETATM 3 C C3 BCK . . . E 3 33.839 6.983 18.224 1 38.44 ? C3 BCK 303 A 1 HETATM 4 C C4 BCK . . . E 3 34.978 7.727 17.906 1 37.44 ? C4 BCK 303 A 1 HETATM 5 N N5 BCK . . . E 3 35.85 7.623 18.958 1 39.19 ? N5 BCK 303 A 1 HETATM 6 N N1 BCK . . . E 3 35.289 6.772 19.931 1 41.98 ? N1 BCK 303 A 1 HETATM 7 C C14 BCK . . . E 3 36.098 6.548 21.184 1 39.37 ? C14 BCK 303 A 1 HETATM 8 C C2 BCK . . . E 3 34.059 6.362 19.57 1 38.34 ? C2 BCK 303 A 1 HETATM 9 C C6 BCK . . . E 3 33.108 5.51 20.397 1 36.62 ? C6 BCK 303 A 1 HETATM 10 C C11 BCK . . . E 3 32.795 5.907 21.72 1 36.43 ? C11 BCK 303 A 1 HETATM 11 C C10 BCK . . . E 3 31.872 5.146 22.474 1 42.72 ? C10 BCK 303 A 1 HETATM 12 C C9 BCK . . . E 3 31.271 3.997 21.931 1 34.15 ? C9 BCK 303 A 1 HETATM 13 C C8 BCK . . . E 3 31.607 3.615 20.624 1 37.68 ? C8 BCK 303 A 1 HETATM 14 C C7 BCK . . . E 3 32.514 4.36 19.872 1 33.52 ? C7 BCK 303 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #