data_3VQE # _model_server_result.job_id B7KOVw4gq2Esc8c-B4wH4g _model_server_result.datetime_utc '2024-10-12 12:22:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vqe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":306}' # _entry.id 3VQE # _exptl.entry_id 3VQE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 206.216 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[1-(4-fluorophenyl)-5-methyl-1H-pyrazol-4-yl]methanol' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3VQE _cell.length_a 49.46 _cell.length_b 49.46 _cell.length_c 103.23 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VQE _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 10 A CYS 65 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc2 A SG CYS 10 A CYS 65 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc3 A NE2 HIS 12 A HIS 67 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc4 A OE1 GLU 37 A GLU 92 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc5 A OE2 GLU 37 A GLU 92 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc6 A OD2 ASP 61 A ASP 116 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc7 D CD CD . A CD 1002 1_555 O O HOH . A HOH 1106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc8 B SG CYS 10 B CYS 65 1_555 I CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc9 B SG CYS 10 B CYS 65 1_555 J CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc10 B NE2 HIS 12 B HIS 67 1_555 I CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc11 B OE1 GLU 37 B GLU 92 1_555 I CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc12 B OE2 GLU 37 B GLU 92 1_555 J CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? metalc ? metalc13 B OD2 ASP 61 B ASP 116 1_555 J CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc14 J CD CD . B CD 302 1_555 P O HOH . B HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? # _chem_comp.formula 'C11 H11 F N2 O' _chem_comp.formula_weight 206.216 _chem_comp.id FMQ _chem_comp.mon_nstd_flag . _chem_comp.name '[1-(4-fluorophenyl)-5-methyl-1H-pyrazol-4-yl]methanol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O15 C14 FMQ sing 83 n n C14 C1 FMQ sing 84 n n C13 C2 FMQ sing 85 n n C1 C2 FMQ doub 86 n y C1 C5 FMQ sing 87 n y C2 N3 FMQ sing 88 n y C5 N4 FMQ doub 89 n y N3 N4 FMQ sing 90 n y N3 C6 FMQ sing 91 n n C7 C6 FMQ doub 92 n y C7 C8 FMQ sing 93 n y C6 C11 FMQ sing 94 n y C8 C9 FMQ doub 95 n y C11 C10 FMQ doub 96 n y C9 C10 FMQ sing 97 n y C9 F12 FMQ sing 98 n n C8 H1 FMQ sing 99 n n C7 H2 FMQ sing 100 n n C10 H3 FMQ sing 101 n n C11 H4 FMQ sing 102 n n C13 H5 FMQ sing 103 n n C13 H6 FMQ sing 104 n n C13 H7 FMQ sing 105 n n C5 H8 FMQ sing 106 n n C14 H9 FMQ sing 107 n n C14 H10 FMQ sing 108 n n O15 H11 FMQ sing 109 n n # _atom_sites.entry_id 3VQE _atom_sites.fract_transf_matrix[1][1] 0.020218 _atom_sites.fract_transf_matrix[1][2] 0.011673 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023346 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009687 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 1001 1001 CD CD . D 2 CD A 1 1002 1002 CD CD . E 3 CL A 1 1003 501 CL CL . F 4 SO4 A 1 1004 750 SO4 SO4 . G 4 SO4 A 1 1005 753 SO4 SO4 . H 5 FMQ A 1 1006 1 FMQ 765 . I 2 CD B 1 301 1003 CD CD . J 2 CD B 1 302 1004 CD CD . K 3 CL B 1 303 502 CL CL . L 4 SO4 B 1 304 751 SO4 SO4 . M 4 SO4 B 1 305 752 SO4 SO4 . N 5 FMQ B 1 306 1 FMQ 765 . O 6 HOH A 1 1101 1 HOH HOH . O 6 HOH A 2 1102 3 HOH HOH . O 6 HOH A 3 1103 4 HOH HOH . O 6 HOH A 4 1104 5 HOH HOH . O 6 HOH A 5 1105 6 HOH HOH . O 6 HOH A 6 1106 9 HOH HOH . O 6 HOH A 7 1107 10 HOH HOH . O 6 HOH A 8 1108 11 HOH HOH . O 6 HOH A 9 1109 15 HOH HOH . O 6 HOH A 10 1110 17 HOH HOH . O 6 HOH A 11 1111 19 HOH HOH . O 6 HOH A 12 1112 20 HOH HOH . O 6 HOH A 13 1113 21 HOH HOH . O 6 HOH A 14 1114 22 HOH HOH . O 6 HOH A 15 1115 23 HOH HOH . O 6 HOH A 16 1116 24 HOH HOH . O 6 HOH A 17 1117 26 HOH HOH . O 6 HOH A 18 1118 28 HOH HOH . O 6 HOH A 19 1119 30 HOH HOH . O 6 HOH A 20 1120 36 HOH HOH . O 6 HOH A 21 1121 38 HOH HOH . O 6 HOH A 22 1122 40 HOH HOH . O 6 HOH A 23 1123 44 HOH HOH . O 6 HOH A 24 1124 45 HOH HOH . O 6 HOH A 25 1125 49 HOH HOH . O 6 HOH A 26 1126 50 HOH HOH . O 6 HOH A 27 1127 51 HOH HOH . O 6 HOH A 28 1128 52 HOH HOH . O 6 HOH A 29 1129 53 HOH HOH . O 6 HOH A 30 1130 54 HOH HOH . O 6 HOH A 31 1131 56 HOH HOH . O 6 HOH A 32 1132 58 HOH HOH . O 6 HOH A 33 1133 60 HOH HOH . O 6 HOH A 34 1134 61 HOH HOH . O 6 HOH A 35 1135 62 HOH HOH . O 6 HOH A 36 1136 63 HOH HOH . O 6 HOH A 37 1137 64 HOH HOH . O 6 HOH A 38 1138 65 HOH HOH . O 6 HOH A 39 1139 66 HOH HOH . O 6 HOH A 40 1140 71 HOH HOH . O 6 HOH A 41 1141 72 HOH HOH . O 6 HOH A 42 1142 74 HOH HOH . O 6 HOH A 43 1143 75 HOH HOH . O 6 HOH A 44 1144 76 HOH HOH . P 6 HOH B 1 401 2 HOH HOH . P 6 HOH B 2 402 7 HOH HOH . P 6 HOH B 3 403 8 HOH HOH . P 6 HOH B 4 404 12 HOH HOH . P 6 HOH B 5 405 13 HOH HOH . P 6 HOH B 6 406 14 HOH HOH . P 6 HOH B 7 407 16 HOH HOH . P 6 HOH B 8 408 18 HOH HOH . P 6 HOH B 9 409 25 HOH HOH . P 6 HOH B 10 410 27 HOH HOH . P 6 HOH B 11 411 29 HOH HOH . P 6 HOH B 12 412 31 HOH HOH . P 6 HOH B 13 413 32 HOH HOH . P 6 HOH B 14 414 33 HOH HOH . P 6 HOH B 15 415 34 HOH HOH . P 6 HOH B 16 416 35 HOH HOH . P 6 HOH B 17 417 37 HOH HOH . P 6 HOH B 18 418 39 HOH HOH . P 6 HOH B 19 419 41 HOH HOH . P 6 HOH B 20 420 42 HOH HOH . P 6 HOH B 21 421 43 HOH HOH . P 6 HOH B 22 422 46 HOH HOH . P 6 HOH B 23 423 47 HOH HOH . P 6 HOH B 24 424 48 HOH HOH . P 6 HOH B 25 425 55 HOH HOH . P 6 HOH B 26 426 57 HOH HOH . P 6 HOH B 27 427 59 HOH HOH . P 6 HOH B 28 428 67 HOH HOH . P 6 HOH B 29 429 68 HOH HOH . P 6 HOH B 30 430 69 HOH HOH . P 6 HOH B 31 431 70 HOH HOH . P 6 HOH B 32 432 73 HOH HOH . P 6 HOH B 33 433 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F12 FMQ . . . N 5 -7.263 21.923 -4.578 1 40.27 ? F12 FMQ 306 B 1 HETATM 2 C C9 FMQ . . . N 5 -8.187 22.256 -5.508 1 36.57 ? C9 FMQ 306 B 1 HETATM 3 C C8 FMQ . . . N 5 -7.896 23.16 -6.507 1 37.5 ? C8 FMQ 306 B 1 HETATM 4 C C7 FMQ . . . N 5 -8.876 23.48 -7.452 1 42.8 ? C7 FMQ 306 B 1 HETATM 5 C C10 FMQ . . . N 5 -9.448 21.68 -5.469 1 37.48 ? C10 FMQ 306 B 1 HETATM 6 C C11 FMQ . . . N 5 -10.411 22.012 -6.406 1 35.08 ? C11 FMQ 306 B 1 HETATM 7 C C6 FMQ . . . N 5 -10.164 22.921 -7.425 1 39.34 ? C6 FMQ 306 B 1 HETATM 8 N N3 FMQ . . . N 5 -11.097 23.231 -8.321 1 40.95 ? N3 FMQ 306 B 1 HETATM 9 C C2 FMQ . . . N 5 -11.061 22.814 -9.581 1 44.68 ? C2 FMQ 306 B 1 HETATM 10 C C13 FMQ . . . N 5 -10.056 21.905 -10.235 1 42.64 ? C13 FMQ 306 B 1 HETATM 11 N N4 FMQ . . . N 5 -12.165 24.064 -8.013 1 36.59 ? N4 FMQ 306 B 1 HETATM 12 C C5 FMQ . . . N 5 -12.885 24.18 -9.166 1 39.09 ? C5 FMQ 306 B 1 HETATM 13 C C1 FMQ . . . N 5 -12.281 23.43 -10.177 1 42.52 ? C1 FMQ 306 B 1 HETATM 14 C C14 FMQ . . . N 5 -12.774 23.296 -11.6 1 47.75 ? C14 FMQ 306 B 1 HETATM 15 O O15 FMQ . . . N 5 -12.688 21.927 -12.022 1 52.77 ? O15 FMQ 306 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #