data_3VQP # _model_server_result.job_id I2pnmeDpb4LI0bQnj3jSuQ _model_server_result.datetime_utc '2024-11-08 03:03:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vqp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":304}' # _entry.id 3VQP # _exptl.entry_id 3VQP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3VQP _cell.length_a 60.85 _cell.length_b 63.18 _cell.length_c 82.13 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VQP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 11 A CYS 65 1_555 C CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc2 A SG CYS 11 A CYS 65 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? metalc ? metalc3 A NE2 HIS 13 A HIS 67 1_555 C CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc4 A OE1 GLU 38 A GLU 92 1_555 C CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc5 A OE2 GLU 38 A GLU 92 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc6 A OD1 ASP 62 A ASP 116 1_555 D CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc7 C CD CD . A CD 301 1_555 K O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc8 D CD CD . A CD 302 1_555 K O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc9 B SG CYS 11 B CYS 65 1_555 I CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc10 B SG CYS 11 B CYS 65 1_555 J CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc11 B NE2 HIS 13 B HIS 67 1_555 J CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc12 B OE2 GLU 38 B GLU 92 1_555 I CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc13 B OE1 GLU 38 B GLU 92 1_555 J CD CD . B CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc14 I CD CD . B CD 301 1_555 L O HOH . B HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc15 I CD CD . B CD 301 1_555 L O HOH . B HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc16 J CD CD . B CD 302 1_555 L O HOH . B HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 313 n n S O2 SO4 doub 314 n n S O3 SO4 sing 315 n n S O4 SO4 sing 316 n n # _atom_sites.entry_id 3VQP _atom_sites.fract_transf_matrix[1][1] 0.016434 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015828 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 301 3 CD CD . D 2 CD A 1 302 4 CD CD . E 3 CL A 1 303 1 CL CL . F 4 SO4 A 1 304 1 SO4 SO4 . G 4 SO4 A 1 305 2 SO4 SO4 . H 5 DBJ A 1 306 1 DBJ LIG . I 2 CD B 1 301 1 CD CD . J 2 CD B 1 302 2 CD CD . K 6 HOH A 1 401 1 HOH HOH . K 6 HOH A 2 402 2 HOH HOH . K 6 HOH A 3 403 3 HOH HOH . K 6 HOH A 4 404 4 HOH HOH . K 6 HOH A 5 405 6 HOH HOH . K 6 HOH A 6 406 12 HOH HOH . K 6 HOH A 7 407 13 HOH HOH . K 6 HOH A 8 408 14 HOH HOH . K 6 HOH A 9 409 15 HOH HOH . K 6 HOH A 10 410 20 HOH HOH . K 6 HOH A 11 411 21 HOH HOH . K 6 HOH A 12 412 22 HOH HOH . K 6 HOH A 13 413 43 HOH HOH . K 6 HOH A 14 414 45 HOH HOH . K 6 HOH A 15 415 46 HOH HOH . K 6 HOH A 16 416 49 HOH HOH . K 6 HOH A 17 417 51 HOH HOH . K 6 HOH A 18 418 54 HOH HOH . K 6 HOH A 19 419 55 HOH HOH . K 6 HOH A 20 420 57 HOH HOH . K 6 HOH A 21 421 58 HOH HOH . K 6 HOH A 22 422 59 HOH HOH . L 6 HOH B 1 401 5 HOH HOH . L 6 HOH B 2 402 7 HOH HOH . L 6 HOH B 3 403 8 HOH HOH . L 6 HOH B 4 404 10 HOH HOH . L 6 HOH B 5 405 11 HOH HOH . L 6 HOH B 6 406 16 HOH HOH . L 6 HOH B 7 407 17 HOH HOH . L 6 HOH B 8 408 18 HOH HOH . L 6 HOH B 9 409 24 HOH HOH . L 6 HOH B 10 410 26 HOH HOH . L 6 HOH B 11 411 27 HOH HOH . L 6 HOH B 12 412 28 HOH HOH . L 6 HOH B 13 413 29 HOH HOH . L 6 HOH B 14 414 31 HOH HOH . L 6 HOH B 15 415 33 HOH HOH . L 6 HOH B 16 416 36 HOH HOH . L 6 HOH B 17 417 37 HOH HOH . L 6 HOH B 18 418 38 HOH HOH . L 6 HOH B 19 419 44 HOH HOH . L 6 HOH B 20 420 48 HOH HOH . L 6 HOH B 21 421 50 HOH HOH . L 6 HOH B 22 422 52 HOH HOH . L 6 HOH B 23 423 53 HOH HOH . L 6 HOH B 24 424 56 HOH HOH . L 6 HOH B 25 425 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 4 1.036 25.781 4.364 1 88.94 ? S SO4 304 A 1 HETATM 2 O O1 SO4 . . . F 4 1.713 24.894 3.398 1 94.42 ? O1 SO4 304 A 1 HETATM 3 O O2 SO4 . . . F 4 -0.439 25.452 4.336 1 76.58 ? O2 SO4 304 A 1 HETATM 4 O O3 SO4 . . . F 4 1.658 25.59 5.7 1 77.78 ? O3 SO4 304 A 1 HETATM 5 O O4 SO4 . . . F 4 1.338 27.184 3.957 1 86.8 ? O4 SO4 304 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #