data_3VQV
#
_model_server_result.job_id            hC9xzmz0AsloXmTH_asNVQ 
_model_server_result.datetime_utc      '2025-01-11 14:38:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3vqv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    3VQV 
#
_exptl.entry_id    3VQV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3VQV 
_cell.length_a            104.876 
_cell.length_b            104.876 
_cell.length_c            70.433 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VQV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 52.438 90.82528 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 233 A GLU 396 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
metalc ? metalc2 A OE1 GLU 233 A GLU 396 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? 
metalc ? metalc3 A OG SER 236 A SER 399 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc4 B O2B ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc5 B O2G ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
metalc ? metalc6 B O1B ANP . A ANP 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc7 B O1A ANP . A ANP 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc8 C MG MG . A MG 502 1_555 E O HOH . A HOH 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc9 C MG MG . A MG 502 1_555 E O HOH . A HOH 768 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
metalc ? metalc10 C MG MG . A MG 502 1_555 E O HOH . A HOH 772 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc11 C MG MG . A MG 502 1_555 E O HOH . A HOH 779 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc12 D MG MG . A MG 503 1_555 E O HOH . A HOH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3VQV 
_atom_sites.fract_transf_matrix[1][1]    0.009535 
_atom_sites.fract_transf_matrix[1][2]    0.005505 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01101 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014198 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ANP A 1 501 301 ANP ACP . 
C 3 MG A 1 502 5401 MG MG . 
D 3 MG A 1 503 5402 MG MG . 
E 4 HOH A 1 601 2 HOH HOH . 
E 4 HOH A 2 602 3 HOH HOH . 
E 4 HOH A 3 603 5 HOH HOH . 
E 4 HOH A 4 604 6 HOH HOH . 
E 4 HOH A 5 605 7 HOH HOH . 
E 4 HOH A 6 606 8 HOH HOH . 
E 4 HOH A 7 607 9 HOH HOH . 
E 4 HOH A 8 608 10 HOH HOH . 
E 4 HOH A 9 609 11 HOH HOH . 
E 4 HOH A 10 610 12 HOH HOH . 
E 4 HOH A 11 611 13 HOH HOH . 
E 4 HOH A 12 612 14 HOH HOH . 
E 4 HOH A 13 613 15 HOH HOH . 
E 4 HOH A 14 614 16 HOH HOH . 
E 4 HOH A 15 615 17 HOH HOH . 
E 4 HOH A 16 616 18 HOH HOH . 
E 4 HOH A 17 617 19 HOH HOH . 
E 4 HOH A 18 618 20 HOH HOH . 
E 4 HOH A 19 619 21 HOH HOH . 
E 4 HOH A 20 620 22 HOH HOH . 
E 4 HOH A 21 621 23 HOH HOH . 
E 4 HOH A 22 622 24 HOH HOH . 
E 4 HOH A 23 623 25 HOH HOH . 
E 4 HOH A 24 624 26 HOH HOH . 
E 4 HOH A 25 625 27 HOH HOH . 
E 4 HOH A 26 626 28 HOH HOH . 
E 4 HOH A 27 627 29 HOH HOH . 
E 4 HOH A 28 628 30 HOH HOH . 
E 4 HOH A 29 629 31 HOH HOH . 
E 4 HOH A 30 630 32 HOH HOH . 
E 4 HOH A 31 631 34 HOH HOH . 
E 4 HOH A 32 632 35 HOH HOH . 
E 4 HOH A 33 633 36 HOH HOH . 
E 4 HOH A 34 634 37 HOH HOH . 
E 4 HOH A 35 635 38 HOH HOH . 
E 4 HOH A 36 636 39 HOH HOH . 
E 4 HOH A 37 637 41 HOH HOH . 
E 4 HOH A 38 638 42 HOH HOH . 
E 4 HOH A 39 639 43 HOH HOH . 
E 4 HOH A 40 640 44 HOH HOH . 
E 4 HOH A 41 641 45 HOH HOH . 
E 4 HOH A 42 642 46 HOH HOH . 
E 4 HOH A 43 643 47 HOH HOH . 
E 4 HOH A 44 644 48 HOH HOH . 
E 4 HOH A 45 645 49 HOH HOH . 
E 4 HOH A 46 646 50 HOH HOH . 
E 4 HOH A 47 647 51 HOH HOH . 
E 4 HOH A 48 648 52 HOH HOH . 
E 4 HOH A 49 649 53 HOH HOH . 
E 4 HOH A 50 650 54 HOH HOH . 
E 4 HOH A 51 651 55 HOH HOH . 
E 4 HOH A 52 652 56 HOH HOH . 
E 4 HOH A 53 653 57 HOH HOH . 
E 4 HOH A 54 654 58 HOH HOH . 
E 4 HOH A 55 655 59 HOH HOH . 
E 4 HOH A 56 656 60 HOH HOH . 
E 4 HOH A 57 657 61 HOH HOH . 
E 4 HOH A 58 658 62 HOH HOH . 
E 4 HOH A 59 659 63 HOH HOH . 
E 4 HOH A 60 660 64 HOH HOH . 
E 4 HOH A 61 661 65 HOH HOH . 
E 4 HOH A 62 662 66 HOH HOH . 
E 4 HOH A 63 663 67 HOH HOH . 
E 4 HOH A 64 664 69 HOH HOH . 
E 4 HOH A 65 665 70 HOH HOH . 
E 4 HOH A 66 666 71 HOH HOH . 
E 4 HOH A 67 667 72 HOH HOH . 
E 4 HOH A 68 668 73 HOH HOH . 
E 4 HOH A 69 669 74 HOH HOH . 
E 4 HOH A 70 670 75 HOH HOH . 
E 4 HOH A 71 671 76 HOH HOH . 
E 4 HOH A 72 672 77 HOH HOH . 
E 4 HOH A 73 673 78 HOH HOH . 
E 4 HOH A 74 674 79 HOH HOH . 
E 4 HOH A 75 675 80 HOH HOH . 
E 4 HOH A 76 676 81 HOH HOH . 
E 4 HOH A 77 677 82 HOH HOH . 
E 4 HOH A 78 678 83 HOH HOH . 
E 4 HOH A 79 679 84 HOH HOH . 
E 4 HOH A 80 680 85 HOH HOH . 
E 4 HOH A 81 681 86 HOH HOH . 
E 4 HOH A 82 682 87 HOH HOH . 
E 4 HOH A 83 683 88 HOH HOH . 
E 4 HOH A 84 684 89 HOH HOH . 
E 4 HOH A 85 685 90 HOH HOH . 
E 4 HOH A 86 686 91 HOH HOH . 
E 4 HOH A 87 687 92 HOH HOH . 
E 4 HOH A 88 688 93 HOH HOH . 
E 4 HOH A 89 689 94 HOH HOH . 
E 4 HOH A 90 690 95 HOH HOH . 
E 4 HOH A 91 691 96 HOH HOH . 
E 4 HOH A 92 692 97 HOH HOH . 
E 4 HOH A 93 693 98 HOH HOH . 
E 4 HOH A 94 694 99 HOH HOH . 
E 4 HOH A 95 695 100 HOH HOH . 
E 4 HOH A 96 696 101 HOH HOH . 
E 4 HOH A 97 697 102 HOH HOH . 
E 4 HOH A 98 698 103 HOH HOH . 
E 4 HOH A 99 699 104 HOH HOH . 
E 4 HOH A 100 700 105 HOH HOH . 
E 4 HOH A 101 701 107 HOH HOH . 
E 4 HOH A 102 702 108 HOH HOH . 
E 4 HOH A 103 703 110 HOH HOH . 
E 4 HOH A 104 704 111 HOH HOH . 
E 4 HOH A 105 705 112 HOH HOH . 
E 4 HOH A 106 706 113 HOH HOH . 
E 4 HOH A 107 707 114 HOH HOH . 
E 4 HOH A 108 708 115 HOH HOH . 
E 4 HOH A 109 709 116 HOH HOH . 
E 4 HOH A 110 710 117 HOH HOH . 
E 4 HOH A 111 711 118 HOH HOH . 
E 4 HOH A 112 712 120 HOH HOH . 
E 4 HOH A 113 713 121 HOH HOH . 
E 4 HOH A 114 714 123 HOH HOH . 
E 4 HOH A 115 715 124 HOH HOH . 
E 4 HOH A 116 716 125 HOH HOH . 
E 4 HOH A 117 717 126 HOH HOH . 
E 4 HOH A 118 718 127 HOH HOH . 
E 4 HOH A 119 719 128 HOH HOH . 
E 4 HOH A 120 720 129 HOH HOH . 
E 4 HOH A 121 721 130 HOH HOH . 
E 4 HOH A 122 722 131 HOH HOH . 
E 4 HOH A 123 723 132 HOH HOH . 
E 4 HOH A 124 724 133 HOH HOH . 
E 4 HOH A 125 725 134 HOH HOH . 
E 4 HOH A 126 726 135 HOH HOH . 
E 4 HOH A 127 727 136 HOH HOH . 
E 4 HOH A 128 728 137 HOH HOH . 
E 4 HOH A 129 729 138 HOH HOH . 
E 4 HOH A 130 730 139 HOH HOH . 
E 4 HOH A 131 731 141 HOH HOH . 
E 4 HOH A 132 732 142 HOH HOH . 
E 4 HOH A 133 733 147 HOH HOH . 
E 4 HOH A 134 734 148 HOH HOH . 
E 4 HOH A 135 735 150 HOH HOH . 
E 4 HOH A 136 736 152 HOH HOH . 
E 4 HOH A 137 737 153 HOH HOH . 
E 4 HOH A 138 738 155 HOH HOH . 
E 4 HOH A 139 739 156 HOH HOH . 
E 4 HOH A 140 740 159 HOH HOH . 
E 4 HOH A 141 741 160 HOH HOH . 
E 4 HOH A 142 742 163 HOH HOH . 
E 4 HOH A 143 743 164 HOH HOH . 
E 4 HOH A 144 744 165 HOH HOH . 
E 4 HOH A 145 745 167 HOH HOH . 
E 4 HOH A 146 746 168 HOH HOH . 
E 4 HOH A 147 747 171 HOH HOH . 
E 4 HOH A 148 748 172 HOH HOH . 
E 4 HOH A 149 749 174 HOH HOH . 
E 4 HOH A 150 750 175 HOH HOH . 
E 4 HOH A 151 751 176 HOH HOH . 
E 4 HOH A 152 752 177 HOH HOH . 
E 4 HOH A 153 753 178 HOH HOH . 
E 4 HOH A 154 754 179 HOH HOH . 
E 4 HOH A 155 755 182 HOH HOH . 
E 4 HOH A 156 756 185 HOH HOH . 
E 4 HOH A 157 757 188 HOH HOH . 
E 4 HOH A 158 758 190 HOH HOH . 
E 4 HOH A 159 759 192 HOH HOH . 
E 4 HOH A 160 760 193 HOH HOH . 
E 4 HOH A 161 761 199 HOH HOH . 
E 4 HOH A 162 762 200 HOH HOH . 
E 4 HOH A 163 763 203 HOH HOH . 
E 4 HOH A 164 764 205 HOH HOH . 
E 4 HOH A 165 765 209 HOH HOH . 
E 4 HOH A 166 766 213 HOH HOH . 
E 4 HOH A 167 767 214 HOH HOH . 
E 4 HOH A 168 768 215 HOH HOH . 
E 4 HOH A 169 769 217 HOH HOH . 
E 4 HOH A 170 770 222 HOH HOH . 
E 4 HOH A 171 771 223 HOH HOH . 
E 4 HOH A 172 772 233 HOH HOH . 
E 4 HOH A 173 773 237 HOH HOH . 
E 4 HOH A 174 774 238 HOH HOH . 
E 4 HOH A 175 775 239 HOH HOH . 
E 4 HOH A 176 776 241 HOH HOH . 
E 4 HOH A 177 777 243 HOH HOH . 
E 4 HOH A 178 778 246 HOH HOH . 
E 4 HOH A 179 779 247 HOH HOH . 
E 4 HOH A 180 780 250 HOH HOH . 
E 4 HOH A 181 781 251 HOH HOH . 
E 4 HOH A 182 782 252 HOH HOH . 
E 4 HOH A 183 783 253 HOH HOH . 
E 4 HOH A 184 784 254 HOH HOH . 
E 4 HOH A 185 785 255 HOH HOH . 
E 4 HOH A 186 786 256 HOH HOH . 
E 4 HOH A 187 787 257 HOH HOH . 
E 4 HOH A 188 788 258 HOH HOH . 
E 4 HOH A 189 789 259 HOH HOH . 
E 4 HOH A 190 790 260 HOH HOH . 
E 4 HOH A 191 791 261 HOH HOH . 
E 4 HOH A 192 792 262 HOH HOH . 
E 4 HOH A 193 793 263 HOH HOH . 
E 4 HOH A 194 794 264 HOH HOH . 
E 4 HOH A 195 795 265 HOH HOH . 
E 4 HOH A 196 796 266 HOH HOH . 
E 4 HOH A 197 797 267 HOH HOH . 
E 4 HOH A 198 798 268 HOH HOH . 
E 4 HOH A 199 799 269 HOH HOH . 
E 4 HOH A 200 800 270 HOH HOH . 
E 4 HOH A 201 801 272 HOH HOH . 
E 4 HOH A 202 802 273 HOH HOH . 
E 4 HOH A 203 803 274 HOH HOH . 
E 4 HOH A 204 804 275 HOH HOH . 
E 4 HOH A 205 805 276 HOH HOH . 
E 4 HOH A 206 806 277 HOH HOH . 
E 4 HOH A 207 807 278 HOH HOH . 
E 4 HOH A 208 808 280 HOH HOH . 
E 4 HOH A 209 809 282 HOH HOH . 
E 4 HOH A 210 810 283 HOH HOH . 
E 4 HOH A 211 811 284 HOH HOH . 
E 4 HOH A 212 812 285 HOH HOH . 
E 4 HOH A 213 813 286 HOH HOH . 
E 4 HOH A 214 814 288 HOH HOH . 
E 4 HOH A 215 815 289 HOH HOH . 
E 4 HOH A 216 816 290 HOH HOH . 
E 4 HOH A 217 817 292 HOH HOH . 
E 4 HOH A 218 818 293 HOH HOH . 
E 4 HOH A 219 819 294 HOH HOH . 
E 4 HOH A 220 820 295 HOH HOH . 
E 4 HOH A 221 821 296 HOH HOH . 
E 4 HOH A 222 822 298 HOH HOH . 
E 4 HOH A 223 823 300 HOH HOH . 
E 4 HOH A 224 824 304 HOH HOH . 
E 4 HOH A 225 825 305 HOH HOH . 
E 4 HOH A 226 826 310 HOH HOH . 
E 4 HOH A 227 827 312 HOH HOH . 
E 4 HOH A 228 828 317 HOH HOH . 
E 4 HOH A 229 829 318 HOH HOH . 
E 4 HOH A 230 830 319 HOH HOH . 
E 4 HOH A 231 831 324 HOH HOH . 
E 4 HOH A 232 832 331 HOH HOH . 
E 4 HOH A 233 833 333 HOH HOH . 
E 4 HOH A 234 834 334 HOH HOH . 
E 4 HOH A 235 835 335 HOH HOH . 
E 4 HOH A 236 836 337 HOH HOH . 
E 4 HOH A 237 837 343 HOH HOH . 
E 4 HOH A 238 838 344 HOH HOH . 
E 4 HOH A 239 839 348 HOH HOH . 
E 4 HOH A 240 840 349 HOH HOH . 
E 4 HOH A 241 841 355 HOH HOH . 
E 4 HOH A 242 842 358 HOH HOH . 
E 4 HOH A 243 843 359 HOH HOH . 
E 4 HOH A 244 844 362 HOH HOH . 
E 4 HOH A 245 845 367 HOH HOH . 
E 4 HOH A 246 846 372 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               6.481 
_atom_site.Cartn_y               37.766 
_atom_site.Cartn_z               5.488 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        45.75 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           503 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#