data_3VRB # _model_server_result.job_id AuOg3DNK1uKgxMyuvrC7CA _model_server_result.datetime_utc '2024-11-24 15:01:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vrb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":304}' # _entry.id 3VRB # _exptl.entry_id 3VRB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 323.31 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-(1-methylethoxy)phenyl]-2-(trifluoromethyl)benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3VRB _cell.length_a 124.306 _cell.length_b 131.649 _cell.length_c 222.519 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VRB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,P 1 1 E,F,G,H,Q,R,S,T,U,V,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 O N N ? 11 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE2 HIS 79 A HIS 79 1_555 J C8M FAD . A FAD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.788 ? covale ? covale2 E NE2 HIS 79 E HIS 79 1_555 R C8M FAD . E FAD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.789 ? metalc ? metalc1 B SG CYS 89 B CYS 89 1_555 K FE2 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc2 B SG CYS 94 B CYS 94 1_555 K FE2 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc3 B SG CYS 97 B CYS 97 1_555 K FE1 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc4 B SG CYS 109 B CYS 109 1_555 K FE1 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc5 B SG CYS 182 B CYS 182 1_555 L FE3 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? metalc ? metalc6 B SG CYS 185 B CYS 185 1_555 L FE1 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.685 ? metalc ? metalc7 B SG CYS 188 B CYS 188 1_555 L FE2 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc8 B SG CYS 192 B CYS 192 1_555 M FE4 F3S . B F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc9 B SG CYS 239 B CYS 239 1_555 M FE1 F3S . B F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc10 B SG CYS 245 B CYS 245 1_555 M FE3 F3S . B F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? metalc ? metalc11 B SG CYS 249 B CYS 249 1_555 L FE4 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc12 C NE2 HIS 131 C HIS 131 1_555 N FE HEM . C HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc13 N FE HEM . C HEM 201 1_555 D NE2 HIS 95 D HIS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc14 F SG CYS 89 F CYS 89 1_555 S FE2 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc15 F SG CYS 94 F CYS 94 1_555 S FE2 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc16 F SG CYS 97 F CYS 97 1_555 S FE1 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.735 ? metalc ? metalc17 F SG CYS 109 F CYS 109 1_555 S FE1 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc18 F SG CYS 182 F CYS 182 1_555 T FE3 SF4 . F SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc19 F SG CYS 185 F CYS 185 1_555 T FE1 SF4 . F SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc20 F SG CYS 188 F CYS 188 1_555 T FE2 SF4 . F SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.462 ? metalc ? metalc21 F SG CYS 192 F CYS 192 1_555 U FE4 F3S . F F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc22 F SG CYS 239 F CYS 239 1_555 U FE1 F3S . F F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc23 F SG CYS 245 F CYS 245 1_555 U FE3 F3S . F F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc24 F SG CYS 249 F CYS 249 1_555 T FE4 SF4 . F SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc25 G NE2 HIS 131 G HIS 131 1_555 W FE HEM . G HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc26 W FE HEM . G HEM 201 1_555 H NE2 HIS 95 H HIS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? # _chem_comp.formula 'C17 H16 F3 N O2' _chem_comp.formula_weight 323.31 _chem_comp.id FTN _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-(1-methylethoxy)phenyl]-2-(trifluoromethyl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms flutolanil;N-(3-Isopropoxy-phenyl)-2-trifluoromethylbenzamide # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C8 FTN sing 303 n n N C9 FTN sing 304 n n C1 F1 FTN sing 305 n n C1 C2 FTN sing 306 n n C1 F2 FTN sing 307 n n C1 F3 FTN sing 308 n n O1 C8 FTN doub 309 n n C2 C3 FTN doub 310 n y C2 C7 FTN sing 311 n y O2 C11 FTN sing 312 n n O2 C15 FTN sing 313 n n C3 C4 FTN sing 314 n y C3 C8 FTN sing 315 n n C4 C5 FTN doub 316 n y C5 C6 FTN sing 317 n y C6 C7 FTN doub 318 n y C9 C10 FTN doub 319 n y C9 C14 FTN sing 320 n y C10 C11 FTN sing 321 n y C11 C12 FTN doub 322 n y C12 C13 FTN sing 323 n y C13 C14 FTN doub 324 n y C15 C16 FTN sing 325 n n C15 C17 FTN sing 326 n n N HN FTN sing 327 n n C4 H4 FTN sing 328 n n C5 H5 FTN sing 329 n n C6 H6 FTN sing 330 n n C7 H7 FTN sing 331 n n C10 H10 FTN sing 332 n n C12 H12 FTN sing 333 n n C13 H13 FTN sing 334 n n C14 H14 FTN sing 335 n n C15 H15 FTN sing 336 n n C16 H16 FTN sing 337 n n C16 H16A FTN sing 338 n n C16 H16B FTN sing 339 n n C17 H17 FTN sing 340 n n C17 H17A FTN sing 341 n n C17 H17B FTN sing 342 n n # _atom_sites.entry_id 3VRB _atom_sites.fract_transf_matrix[1][1] 0.008045 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004494 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 FUM A 1 701 300 FUM FMR . J 6 FAD A 1 702 301 FAD FAD . K 7 FES B 1 301 302 FES FES . L 8 SF4 B 1 302 303 SF4 FS4 . M 9 F3S B 1 303 304 F3S F3S . N 10 HEM C 1 201 305 HEM HEM . O 11 FTN C 1 202 810 FTN FTN . P 12 EPH D 1 201 306 EPH EPH . Q 5 FUM E 1 701 300 FUM FMR . R 6 FAD E 1 702 301 FAD FAD . S 7 FES F 1 301 302 FES FES . T 8 SF4 F 1 302 303 SF4 FS4 . U 9 F3S F 1 303 304 F3S F3S . V 11 FTN F 1 304 810 FTN FTN . W 10 HEM G 1 201 305 HEM HEM . X 12 EPH H 1 201 306 EPH EPH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N FTN . . . V 11 2.028 15.212 19.128 1 67.69 ? N FTN 304 F 1 HETATM 2 C C1 FTN . . . V 11 3.321 15.128 23.092 1 66.42 ? C1 FTN 304 F 1 HETATM 3 F F1 FTN . . . V 11 2.947 16.387 23.208 1 65.56 ? F1 FTN 304 F 1 HETATM 4 O O1 FTN . . . V 11 2.27 16.66 20.814 1 66.72 ? O1 FTN 304 F 1 HETATM 5 C C2 FTN . . . V 11 2.161 14.294 22.659 1 66.86 ? C2 FTN 304 F 1 HETATM 6 F F2 FTN . . . V 11 4.277 15.064 22.2 1 67.91 ? F2 FTN 304 F 1 HETATM 7 O O2 FTN . . . V 11 4.539 16.105 15.376 1 77.94 ? O2 FTN 304 F 1 HETATM 8 C C3 FTN . . . V 11 1.495 14.512 21.358 1 67.08 ? C3 FTN 304 F 1 HETATM 9 F F3 FTN . . . V 11 3.76 14.698 24.25 1 66.84 ? F3 FTN 304 F 1 HETATM 10 C C4 FTN . . . V 11 0.413 13.723 21.021 1 67.95 ? C4 FTN 304 F 1 HETATM 11 C C5 FTN . . . V 11 -0.035 12.736 21.892 1 68.23 ? C5 FTN 304 F 1 HETATM 12 C C6 FTN . . . V 11 0.583 12.525 23.113 1 68.04 ? C6 FTN 304 F 1 HETATM 13 C C7 FTN . . . V 11 1.671 13.303 23.495 1 67.94 ? C7 FTN 304 F 1 HETATM 14 C C8 FTN . . . V 11 1.96 15.553 20.404 1 67.16 ? C8 FTN 304 F 1 HETATM 15 C C9 FTN . . . V 11 2.431 16.115 18.253 1 70.03 ? C9 FTN 304 F 1 HETATM 16 C C10 FTN . . . V 11 3.315 15.713 17.357 1 71.96 ? C10 FTN 304 F 1 HETATM 17 C C11 FTN . . . V 11 3.29 16.355 16.003 1 74.33 ? C11 FTN 304 F 1 HETATM 18 C C12 FTN . . . V 11 3.083 17.843 16.175 1 73.78 ? C12 FTN 304 F 1 HETATM 19 C C13 FTN . . . V 11 2.15 18.294 17.013 1 72.55 ? C13 FTN 304 F 1 HETATM 20 C C14 FTN . . . V 11 1.865 17.53 18.286 1 71.7 ? C14 FTN 304 F 1 HETATM 21 C C15 FTN . . . V 11 4.473 14.949 14.528 1 80.87 ? C15 FTN 304 F 1 HETATM 22 C C16 FTN . . . V 11 5.677 14.047 14.787 1 81.26 ? C16 FTN 304 F 1 HETATM 23 C C17 FTN . . . V 11 4.416 15.364 13.054 1 82.41 ? C17 FTN 304 F 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #