data_3VU6 # _model_server_result.job_id H_sIzrjb2ZKvzJa5WF8A8g _model_server_result.datetime_utc '2024-12-23 11:03:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vu6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 3VU6 # _exptl.entry_id 3VU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3VU6 _cell.length_a 44.91 _cell.length_b 44.91 _cell.length_c 182.908 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -22.455 38.893201 0 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -44.91 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 38 A GLN 590 1_555 A N NH2 39 A NH2 591 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 B C ACE 1 B ACE 625 1_555 B N MET 2 B MET 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 245 n n S O2 SO4 doub 246 n n S O3 SO4 sing 247 n n S O4 SO4 sing 248 n n # _atom_sites.entry_id 3VU6 _atom_sites.fract_transf_matrix[1][1] 0.022267 _atom_sites.fract_transf_matrix[1][2] 0.012856 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025711 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005467 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 601 1 SO4 SO4 . D 4 HOH A 1 701 1 HOH HOH . D 4 HOH A 2 702 2 HOH HOH . D 4 HOH A 3 703 3 HOH HOH . D 4 HOH A 4 704 4 HOH HOH . D 4 HOH A 5 705 5 HOH HOH . D 4 HOH A 6 706 6 HOH HOH . D 4 HOH A 7 707 7 HOH HOH . D 4 HOH A 8 708 8 HOH HOH . D 4 HOH A 9 709 9 HOH HOH . D 4 HOH A 10 710 10 HOH HOH . D 4 HOH A 11 711 11 HOH HOH . D 4 HOH A 12 712 12 HOH HOH . D 4 HOH A 13 713 13 HOH HOH . D 4 HOH A 14 714 14 HOH HOH . D 4 HOH A 15 715 15 HOH HOH . D 4 HOH A 16 716 16 HOH HOH . D 4 HOH A 17 717 17 HOH HOH . D 4 HOH A 18 718 18 HOH HOH . D 4 HOH A 19 719 19 HOH HOH . D 4 HOH A 20 720 21 HOH HOH . D 4 HOH A 21 721 22 HOH HOH . D 4 HOH A 22 722 23 HOH HOH . D 4 HOH A 23 723 24 HOH HOH . D 4 HOH A 24 724 25 HOH HOH . D 4 HOH A 25 725 26 HOH HOH . D 4 HOH A 26 726 28 HOH HOH . D 4 HOH A 27 727 29 HOH HOH . D 4 HOH A 28 728 30 HOH HOH . D 4 HOH A 29 729 31 HOH HOH . D 4 HOH A 30 730 32 HOH HOH . D 4 HOH A 31 731 33 HOH HOH . D 4 HOH A 32 732 34 HOH HOH . D 4 HOH A 33 733 35 HOH HOH . D 4 HOH A 34 734 36 HOH HOH . D 4 HOH A 35 735 37 HOH HOH . D 4 HOH A 36 736 38 HOH HOH . D 4 HOH A 37 737 39 HOH HOH . D 4 HOH A 38 738 40 HOH HOH . D 4 HOH A 39 739 41 HOH HOH . D 4 HOH A 40 740 42 HOH HOH . D 4 HOH A 41 741 43 HOH HOH . D 4 HOH A 42 742 44 HOH HOH . D 4 HOH A 43 743 45 HOH HOH . D 4 HOH A 44 744 46 HOH HOH . E 4 HOH B 1 701 20 HOH HOH . E 4 HOH B 2 702 27 HOH HOH . E 4 HOH B 3 703 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -29.489 -0.139 0.167 0.47 61.31 ? S SO4 601 A 1 HETATM 2 O O1 SO4 . . . C 3 -29.226 -0.379 -1.261 0.47 49.39 ? O1 SO4 601 A 1 HETATM 3 O O2 SO4 . . . C 3 -30.937 -0.059 0.39 0.47 56.82 ? O2 SO4 601 A 1 HETATM 4 O O3 SO4 . . . C 3 -28.926 -1.2 1.012 0.47 34.93 ? O3 SO4 601 A 1 HETATM 5 O O4 SO4 . . . C 3 -28.872 1.13 0.546 0.47 52.3 ? O4 SO4 601 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 5 #