data_3VUM
#
_model_server_result.job_id            nHZXCxzRTzt1bSvvCiFHwg 
_model_server_result.datetime_utc      '2024-11-04 20:15:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3vum 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    3VUM 
#
_exptl.entry_id    3VUM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3VUM 
_cell.length_a            161.883 
_cell.length_b            161.883 
_cell.length_c            87.974 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VUM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 338 n n 
C C2 TRS sing 339 n n 
C C3 TRS sing 340 n n 
C N TRS sing 341 n n 
C1 O1 TRS sing 342 n n 
C1 H11 TRS sing 343 n n 
C1 H12 TRS sing 344 n n 
C2 O2 TRS sing 345 n n 
C2 H21 TRS sing 346 n n 
C2 H22 TRS sing 347 n n 
C3 O3 TRS sing 348 n n 
C3 H31 TRS sing 349 n n 
C3 H32 TRS sing 350 n n 
N HN1 TRS sing 351 n n 
N HN2 TRS sing 352 n n 
N HN3 TRS sing 353 n n 
O1 HO1 TRS sing 354 n n 
O2 HO2 TRS sing 355 n n 
O3 HO3 TRS sing 356 n n 
#
_atom_sites.entry_id                     3VUM 
_atom_sites.fract_transf_matrix[1][1]    0.006177 
_atom_sites.fract_transf_matrix[1][2]    0.003566 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007133 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011367 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 A 1 401 1 SO4 SO4 . 
D 4 TRS A 1 402 1 TRS TRS . 
E 5 HOH A 1 501 1 HOH HOH . 
E 5 HOH A 2 502 2 HOH HOH . 
E 5 HOH A 3 503 3 HOH HOH . 
E 5 HOH A 4 504 5 HOH HOH . 
E 5 HOH A 5 505 6 HOH HOH . 
E 5 HOH A 6 506 7 HOH HOH . 
E 5 HOH A 7 507 8 HOH HOH . 
E 5 HOH A 8 508 11 HOH HOH . 
E 5 HOH A 9 509 12 HOH HOH . 
E 5 HOH A 10 510 13 HOH HOH . 
E 5 HOH A 11 511 16 HOH HOH . 
E 5 HOH A 12 512 21 HOH HOH . 
E 5 HOH A 13 513 22 HOH HOH . 
E 5 HOH A 14 514 23 HOH HOH . 
E 5 HOH A 15 515 24 HOH HOH . 
E 5 HOH A 16 516 26 HOH HOH . 
E 5 HOH A 17 517 27 HOH HOH . 
E 5 HOH A 18 518 28 HOH HOH . 
E 5 HOH A 19 519 29 HOH HOH . 
E 5 HOH A 20 520 32 HOH HOH . 
E 5 HOH A 21 521 33 HOH HOH . 
E 5 HOH A 22 522 36 HOH HOH . 
E 5 HOH A 23 523 37 HOH HOH . 
E 5 HOH A 24 524 38 HOH HOH . 
E 5 HOH A 25 525 40 HOH HOH . 
E 5 HOH A 26 526 42 HOH HOH . 
E 5 HOH A 27 527 46 HOH HOH . 
E 5 HOH A 28 528 7 HOH HOH . 
E 5 HOH A 29 529 11 HOH HOH . 
E 5 HOH A 30 530 12 HOH HOH . 
E 5 HOH A 31 531 13 HOH HOH . 
E 5 HOH A 32 532 14 HOH HOH . 
E 5 HOH A 33 533 15 HOH HOH . 
E 5 HOH A 34 534 18 HOH HOH . 
E 5 HOH A 35 535 20 HOH HOH . 
E 5 HOH A 36 536 23 HOH HOH . 
E 5 HOH A 37 537 24 HOH HOH . 
E 5 HOH A 38 538 27 HOH HOH . 
E 5 HOH A 39 539 29 HOH HOH . 
E 5 HOH A 40 540 30 HOH HOH . 
E 5 HOH A 41 541 33 HOH HOH . 
E 5 HOH A 42 542 38 HOH HOH . 
E 5 HOH A 43 543 40 HOH HOH . 
E 5 HOH A 44 544 41 HOH HOH . 
E 5 HOH A 45 545 2 HOH HOH . 
E 5 HOH A 46 546 3 HOH HOH . 
E 5 HOH A 47 547 4 HOH HOH . 
E 5 HOH A 48 548 5 HOH HOH . 
E 5 HOH A 49 549 6 HOH HOH . 
E 5 HOH A 50 550 7 HOH HOH . 
E 5 HOH A 51 551 9 HOH HOH . 
E 5 HOH A 52 552 11 HOH HOH . 
E 5 HOH A 53 553 12 HOH HOH . 
E 5 HOH A 54 554 14 HOH HOH . 
E 5 HOH A 55 555 1 HOH HOH . 
E 5 HOH A 56 556 3 HOH HOH . 
E 5 HOH A 57 557 4 HOH HOH . 
E 5 HOH A 58 558 5 HOH HOH . 
E 5 HOH A 59 559 7 HOH HOH . 
E 5 HOH A 60 560 8 HOH HOH . 
E 5 HOH A 61 561 9 HOH HOH . 
E 5 HOH A 62 562 10 HOH HOH . 
E 5 HOH A 63 563 12 HOH HOH . 
E 5 HOH A 64 564 13 HOH HOH . 
E 5 HOH A 65 565 1 HOH HOH . 
E 5 HOH A 66 566 2 HOH HOH . 
E 5 HOH A 67 567 4 HOH HOH . 
E 5 HOH A 68 568 7 HOH HOH . 
E 5 HOH A 69 569 8 HOH HOH . 
E 5 HOH A 70 570 10 HOH HOH . 
E 5 HOH A 71 571 15 HOH HOH . 
E 5 HOH A 72 572 1 HOH HOH . 
E 5 HOH A 73 573 2 HOH HOH . 
E 5 HOH A 74 574 3 HOH HOH . 
E 5 HOH A 75 575 1 HOH HOH . 
E 5 HOH A 76 576 1 HOH HOH . 
E 5 HOH A 77 577 5 HOH HOH . 
E 5 HOH A 78 578 26 HOH HOH . 
F 5 HOH F 1 601 20 HOH HOH . 
F 5 HOH F 2 602 25 HOH HOH . 
F 5 HOH F 3 603 35 HOH HOH . 
F 5 HOH F 4 604 22 HOH HOH . 
F 5 HOH F 5 605 1 HOH HOH . 
F 5 HOH F 6 606 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . D 4 65.777 -35.374 -0.465 1 72.43 ? C TRS 402 A 1 
HETATM 2 C C1 TRS . . . D 4 65.781 -35.827 -1.941 1 84.85 ? C1 TRS 402 A 1 
HETATM 3 C C2 TRS . . . D 4 66.904 -36.094 0.314 1 87.17 ? C2 TRS 402 A 1 
HETATM 4 C C3 TRS . . . D 4 64.396 -35.586 0.213 1 73.27 ? C3 TRS 402 A 1 
HETATM 5 N N TRS . . . D 4 66.167 -33.941 -0.544 1 80.53 ? N TRS 402 A 1 
HETATM 6 O O1 TRS . . . D 4 64.967 -35.006 -2.81 1 82.66 ? O1 TRS 402 A 1 
HETATM 7 O O2 TRS . . . D 4 66.678 -37.423 0.871 1 66.73 ? O2 TRS 402 A 1 
HETATM 8 O O3 TRS . . . D 4 63.775 -34.594 1.087 1 60.02 ? O3 TRS 402 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#