data_3VUS # _model_server_result.job_id Zrvpv6liwGf862kTwRMsGQ _model_server_result.datetime_utc '2024-11-05 00:33:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vus # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 3VUS # _exptl.entry_id 3VUS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.25 _cell.angle_gamma 90 _cell.entry_id 3VUS _cell.length_a 39.559 _cell.length_b 53.114 _cell.length_c 144.17 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 74 A ASP 115 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc2 A NE2 HIS 143 A HIS 184 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc3 A NE2 HIS 148 A HIS 189 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc4 C ZN ZN . A ZN 401 1_555 D O ACT . A ACT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc5 C ZN ZN . A ZN 401 1_555 D OXT ACT . A ACT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc6 B NE2 HIS 57 B HIS 98 1_555 G HG HG . B HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc7 B OD1 ASP 74 B ASP 115 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc8 B NE2 HIS 143 B HIS 184 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc9 B NE2 HIS 148 B HIS 189 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc10 E ZN ZN . B ZN 401 1_555 F O ACT . B ACT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3VUS _atom_sites.fract_transf_matrix[1][1] 0.025279 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002321 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018827 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 1 ZN ZN . D 3 ACT A 1 402 1 ACT ACT . E 2 ZN B 1 401 2 ZN ZN . F 3 ACT B 1 402 2 ACT ACT . G 4 HG B 1 403 1 HG HG . H 5 HOH A 1 501 1 HOH HOH . H 5 HOH A 2 502 2 HOH HOH . H 5 HOH A 3 503 3 HOH HOH . H 5 HOH A 4 504 4 HOH HOH . H 5 HOH A 5 505 6 HOH HOH . H 5 HOH A 6 506 9 HOH HOH . H 5 HOH A 7 507 11 HOH HOH . H 5 HOH A 8 508 13 HOH HOH . H 5 HOH A 9 509 14 HOH HOH . H 5 HOH A 10 510 16 HOH HOH . H 5 HOH A 11 511 18 HOH HOH . H 5 HOH A 12 512 19 HOH HOH . H 5 HOH A 13 513 20 HOH HOH . H 5 HOH A 14 514 22 HOH HOH . H 5 HOH A 15 515 23 HOH HOH . H 5 HOH A 16 516 25 HOH HOH . H 5 HOH A 17 517 27 HOH HOH . H 5 HOH A 18 518 28 HOH HOH . H 5 HOH A 19 519 29 HOH HOH . H 5 HOH A 20 520 30 HOH HOH . H 5 HOH A 21 521 37 HOH HOH . H 5 HOH A 22 522 38 HOH HOH . H 5 HOH A 23 523 39 HOH HOH . H 5 HOH A 24 524 42 HOH HOH . H 5 HOH A 25 525 45 HOH HOH . H 5 HOH A 26 526 47 HOH HOH . H 5 HOH A 27 527 49 HOH HOH . H 5 HOH A 28 528 50 HOH HOH . H 5 HOH A 29 529 54 HOH HOH . H 5 HOH A 30 530 55 HOH HOH . H 5 HOH A 31 531 56 HOH HOH . H 5 HOH A 32 532 57 HOH HOH . H 5 HOH A 33 533 59 HOH HOH . H 5 HOH A 34 534 61 HOH HOH . H 5 HOH A 35 535 62 HOH HOH . H 5 HOH A 36 536 64 HOH HOH . H 5 HOH A 37 537 65 HOH HOH . H 5 HOH A 38 538 66 HOH HOH . H 5 HOH A 39 539 68 HOH HOH . H 5 HOH A 40 540 71 HOH HOH . H 5 HOH A 41 541 74 HOH HOH . H 5 HOH A 42 542 75 HOH HOH . H 5 HOH A 43 543 77 HOH HOH . H 5 HOH A 44 544 81 HOH HOH . H 5 HOH A 45 545 82 HOH HOH . H 5 HOH A 46 546 83 HOH HOH . H 5 HOH A 47 547 84 HOH HOH . H 5 HOH A 48 548 85 HOH HOH . H 5 HOH A 49 549 86 HOH HOH . H 5 HOH A 50 550 94 HOH HOH . H 5 HOH A 51 551 99 HOH HOH . H 5 HOH A 52 552 100 HOH HOH . H 5 HOH A 53 553 101 HOH HOH . H 5 HOH A 54 554 102 HOH HOH . H 5 HOH A 55 555 104 HOH HOH . H 5 HOH A 56 556 105 HOH HOH . H 5 HOH A 57 557 106 HOH HOH . H 5 HOH A 58 558 107 HOH HOH . H 5 HOH A 59 559 108 HOH HOH . H 5 HOH A 60 560 109 HOH HOH . H 5 HOH A 61 561 112 HOH HOH . H 5 HOH A 62 562 113 HOH HOH . H 5 HOH A 63 563 115 HOH HOH . H 5 HOH A 64 564 120 HOH HOH . H 5 HOH A 65 565 121 HOH HOH . H 5 HOH A 66 566 122 HOH HOH . H 5 HOH A 67 567 123 HOH HOH . H 5 HOH A 68 568 125 HOH HOH . H 5 HOH A 69 569 129 HOH HOH . H 5 HOH A 70 570 131 HOH HOH . H 5 HOH A 71 571 134 HOH HOH . H 5 HOH A 72 572 140 HOH HOH . H 5 HOH A 73 573 141 HOH HOH . H 5 HOH A 74 574 142 HOH HOH . H 5 HOH A 75 575 147 HOH HOH . H 5 HOH A 76 576 149 HOH HOH . H 5 HOH A 77 577 150 HOH HOH . H 5 HOH A 78 578 151 HOH HOH . H 5 HOH A 79 579 152 HOH HOH . H 5 HOH A 80 580 153 HOH HOH . H 5 HOH A 81 581 156 HOH HOH . H 5 HOH A 82 582 157 HOH HOH . H 5 HOH A 83 583 159 HOH HOH . H 5 HOH A 84 584 161 HOH HOH . H 5 HOH A 85 585 163 HOH HOH . H 5 HOH A 86 586 165 HOH HOH . H 5 HOH A 87 587 168 HOH HOH . H 5 HOH A 88 588 169 HOH HOH . H 5 HOH A 89 589 171 HOH HOH . H 5 HOH A 90 590 179 HOH HOH . H 5 HOH A 91 591 181 HOH HOH . I 5 HOH B 1 501 5 HOH HOH . I 5 HOH B 2 502 7 HOH HOH . I 5 HOH B 3 503 8 HOH HOH . I 5 HOH B 4 504 10 HOH HOH . I 5 HOH B 5 505 12 HOH HOH . I 5 HOH B 6 506 15 HOH HOH . I 5 HOH B 7 507 17 HOH HOH . I 5 HOH B 8 508 21 HOH HOH . I 5 HOH B 9 509 24 HOH HOH . I 5 HOH B 10 510 26 HOH HOH . I 5 HOH B 11 511 31 HOH HOH . I 5 HOH B 12 512 32 HOH HOH . I 5 HOH B 13 513 33 HOH HOH . I 5 HOH B 14 514 34 HOH HOH . I 5 HOH B 15 515 35 HOH HOH . I 5 HOH B 16 516 36 HOH HOH . I 5 HOH B 17 517 40 HOH HOH . I 5 HOH B 18 518 41 HOH HOH . I 5 HOH B 19 519 43 HOH HOH . I 5 HOH B 20 520 44 HOH HOH . I 5 HOH B 21 521 46 HOH HOH . I 5 HOH B 22 522 48 HOH HOH . I 5 HOH B 23 523 51 HOH HOH . I 5 HOH B 24 524 52 HOH HOH . I 5 HOH B 25 525 53 HOH HOH . I 5 HOH B 26 526 58 HOH HOH . I 5 HOH B 27 527 60 HOH HOH . I 5 HOH B 28 528 63 HOH HOH . I 5 HOH B 29 529 67 HOH HOH . I 5 HOH B 30 530 70 HOH HOH . I 5 HOH B 31 531 72 HOH HOH . I 5 HOH B 32 532 73 HOH HOH . I 5 HOH B 33 533 76 HOH HOH . I 5 HOH B 34 534 78 HOH HOH . I 5 HOH B 35 535 79 HOH HOH . I 5 HOH B 36 536 80 HOH HOH . I 5 HOH B 37 537 87 HOH HOH . I 5 HOH B 38 538 89 HOH HOH . I 5 HOH B 39 539 90 HOH HOH . I 5 HOH B 40 540 92 HOH HOH . I 5 HOH B 41 541 93 HOH HOH . I 5 HOH B 42 542 95 HOH HOH . I 5 HOH B 43 543 96 HOH HOH . I 5 HOH B 44 544 97 HOH HOH . I 5 HOH B 45 545 98 HOH HOH . I 5 HOH B 46 546 103 HOH HOH . I 5 HOH B 47 547 110 HOH HOH . I 5 HOH B 48 548 111 HOH HOH . I 5 HOH B 49 549 114 HOH HOH . I 5 HOH B 50 550 116 HOH HOH . I 5 HOH B 51 551 117 HOH HOH . I 5 HOH B 52 552 118 HOH HOH . I 5 HOH B 53 553 124 HOH HOH . I 5 HOH B 54 554 126 HOH HOH . I 5 HOH B 55 555 127 HOH HOH . I 5 HOH B 56 556 128 HOH HOH . I 5 HOH B 57 557 130 HOH HOH . I 5 HOH B 58 558 132 HOH HOH . I 5 HOH B 59 559 133 HOH HOH . I 5 HOH B 60 560 135 HOH HOH . I 5 HOH B 61 561 136 HOH HOH . I 5 HOH B 62 562 137 HOH HOH . I 5 HOH B 63 563 138 HOH HOH . I 5 HOH B 64 564 139 HOH HOH . I 5 HOH B 65 565 143 HOH HOH . I 5 HOH B 66 566 144 HOH HOH . I 5 HOH B 67 567 145 HOH HOH . I 5 HOH B 68 568 146 HOH HOH . I 5 HOH B 69 569 155 HOH HOH . I 5 HOH B 70 570 160 HOH HOH . I 5 HOH B 71 571 162 HOH HOH . I 5 HOH B 72 572 164 HOH HOH . I 5 HOH B 73 573 166 HOH HOH . I 5 HOH B 74 574 167 HOH HOH . I 5 HOH B 75 575 170 HOH HOH . I 5 HOH B 76 576 172 HOH HOH . I 5 HOH B 77 577 173 HOH HOH . I 5 HOH B 78 578 174 HOH HOH . I 5 HOH B 79 579 175 HOH HOH . I 5 HOH B 80 580 176 HOH HOH . I 5 HOH B 81 581 177 HOH HOH . I 5 HOH B 82 582 178 HOH HOH . I 5 HOH B 83 583 180 HOH HOH . I 5 HOH B 84 584 182 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 3 27.549 15.698 54.506 1 38.07 ? C ACT 402 A 1 HETATM 2 O O ACT . . . D 3 26.987 15.756 53.366 1 30 ? O ACT 402 A 1 HETATM 3 O OXT ACT . . . D 3 27.952 16.695 55.079 1 30.16 ? OXT ACT 402 A 1 HETATM 4 C CH3 ACT . . . D 3 27.889 14.355 55.236 1 21.06 ? CH3 ACT 402 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #