data_3VVC # _model_server_result.job_id E9qupdzWR9Lps4Cm_U8C9A _model_server_result.datetime_utc '2024-11-05 00:29:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vvc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 3VVC # _exptl.entry_id 3VVC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3VVC _cell.length_a 160.54 _cell.length_b 160.54 _cell.length_c 80.05 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VVC _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 6 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 370 n n S O2 SO4 doub 371 n n S O3 SO4 sing 372 n n S O4 SO4 sing 373 n n # _atom_sites.entry_id 3VVC _atom_sites.fract_transf_matrix[1][1] 0.006229 _atom_sites.fract_transf_matrix[1][2] 0.003596 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007193 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012492 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 401 401 NAP NAP . C 3 SO4 A 1 402 402 SO4 SO4 . D 3 SO4 A 1 403 403 SO4 SO4 . E 3 SO4 A 1 404 404 SO4 SO4 . F 3 SO4 A 1 405 405 SO4 SO4 . G 3 SO4 A 1 406 406 SO4 SO4 . H 4 HOH A 1 501 501 HOH HOH . H 4 HOH A 2 502 502 HOH HOH . H 4 HOH A 3 503 503 HOH HOH . H 4 HOH A 4 504 504 HOH HOH . H 4 HOH A 5 505 505 HOH HOH . H 4 HOH A 6 506 506 HOH HOH . H 4 HOH A 7 507 507 HOH HOH . H 4 HOH A 8 508 508 HOH HOH . H 4 HOH A 9 509 509 HOH HOH . H 4 HOH A 10 510 510 HOH HOH . H 4 HOH A 11 511 511 HOH HOH . H 4 HOH A 12 512 512 HOH HOH . H 4 HOH A 13 513 513 HOH HOH . H 4 HOH A 14 514 514 HOH HOH . H 4 HOH A 15 515 515 HOH HOH . H 4 HOH A 16 516 516 HOH HOH . H 4 HOH A 17 517 517 HOH HOH . H 4 HOH A 18 518 518 HOH HOH . H 4 HOH A 19 519 519 HOH HOH . H 4 HOH A 20 520 520 HOH HOH . H 4 HOH A 21 521 521 HOH HOH . H 4 HOH A 22 522 522 HOH HOH . H 4 HOH A 23 523 523 HOH HOH . H 4 HOH A 24 524 524 HOH HOH . H 4 HOH A 25 525 525 HOH HOH . H 4 HOH A 26 526 526 HOH HOH . H 4 HOH A 27 527 527 HOH HOH . H 4 HOH A 28 528 528 HOH HOH . H 4 HOH A 29 529 529 HOH HOH . H 4 HOH A 30 530 530 HOH HOH . H 4 HOH A 31 531 531 HOH HOH . H 4 HOH A 32 532 532 HOH HOH . H 4 HOH A 33 533 533 HOH HOH . H 4 HOH A 34 534 534 HOH HOH . H 4 HOH A 35 535 535 HOH HOH . H 4 HOH A 36 536 536 HOH HOH . H 4 HOH A 37 537 537 HOH HOH . H 4 HOH A 38 538 538 HOH HOH . H 4 HOH A 39 539 539 HOH HOH . H 4 HOH A 40 540 540 HOH HOH . H 4 HOH A 41 541 541 HOH HOH . H 4 HOH A 42 542 542 HOH HOH . H 4 HOH A 43 543 543 HOH HOH . H 4 HOH A 44 544 544 HOH HOH . H 4 HOH A 45 545 545 HOH HOH . H 4 HOH A 46 546 546 HOH HOH . H 4 HOH A 47 547 547 HOH HOH . H 4 HOH A 48 548 548 HOH HOH . H 4 HOH A 49 549 549 HOH HOH . H 4 HOH A 50 550 550 HOH HOH . H 4 HOH A 51 551 551 HOH HOH . H 4 HOH A 52 552 552 HOH HOH . H 4 HOH A 53 553 553 HOH HOH . H 4 HOH A 54 554 554 HOH HOH . H 4 HOH A 55 555 555 HOH HOH . H 4 HOH A 56 556 556 HOH HOH . H 4 HOH A 57 557 557 HOH HOH . H 4 HOH A 58 558 558 HOH HOH . H 4 HOH A 59 559 559 HOH HOH . H 4 HOH A 60 560 560 HOH HOH . H 4 HOH A 61 561 561 HOH HOH . H 4 HOH A 62 562 562 HOH HOH . H 4 HOH A 63 563 563 HOH HOH . H 4 HOH A 64 564 564 HOH HOH . H 4 HOH A 65 565 565 HOH HOH . H 4 HOH A 66 566 566 HOH HOH . H 4 HOH A 67 567 567 HOH HOH . H 4 HOH A 68 568 568 HOH HOH . H 4 HOH A 69 569 569 HOH HOH . H 4 HOH A 70 570 570 HOH HOH . H 4 HOH A 71 571 571 HOH HOH . H 4 HOH A 72 572 572 HOH HOH . H 4 HOH A 73 573 573 HOH HOH . H 4 HOH A 74 574 574 HOH HOH . H 4 HOH A 75 575 575 HOH HOH . H 4 HOH A 76 576 576 HOH HOH . H 4 HOH A 77 577 577 HOH HOH . H 4 HOH A 78 578 578 HOH HOH . H 4 HOH A 79 579 579 HOH HOH . H 4 HOH A 80 580 580 HOH HOH . H 4 HOH A 81 581 581 HOH HOH . H 4 HOH A 82 582 582 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -13.552 -15.441 -25.982 1 74.25 ? S SO4 402 A 1 HETATM 2 O O1 SO4 . . . C 3 -12.833 -14.86 -27.154 1 80.57 ? O1 SO4 402 A 1 HETATM 3 O O2 SO4 . . . C 3 -14.85 -14.724 -25.834 1 76.08 ? O2 SO4 402 A 1 HETATM 4 O O3 SO4 . . . C 3 -13.802 -16.896 -26.16 1 68.13 ? O3 SO4 402 A 1 HETATM 5 O O4 SO4 . . . C 3 -12.707 -15.226 -24.777 1 65.09 ? O4 SO4 402 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #