data_3VVI # _model_server_result.job_id Wglwt8mBbb3FFgi8U7126w _model_server_result.datetime_utc '2025-04-04 21:54:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vvi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":101}' # _entry.id 3VVI # _exptl.entry_id 3VVI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3VVI _cell.length_a 35.29 _cell.length_b 35.29 _cell.length_c 120.237 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VVI _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,L,M,N,O 1 1 E,F,G,H,J,K,P,Q,R,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3VVI _atom_sites.fract_transf_matrix[1][1] 0.028337 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028337 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008317 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ACT C 1 101 3 ACT ACT . J 2 ACT F 1 101 2 ACT ACT . K 2 ACT H 1 101 1 ACT ACT . L 3 HOH A 1 101 5 HOH HOH . L 3 HOH A 2 102 8 HOH HOH . L 3 HOH A 3 103 19 HOH HOH . L 3 HOH A 4 104 21 HOH HOH . L 3 HOH A 5 105 22 HOH HOH . L 3 HOH A 6 106 25 HOH HOH . L 3 HOH A 7 107 30 HOH HOH . L 3 HOH A 8 108 47 HOH HOH . L 3 HOH A 9 109 48 HOH HOH . L 3 HOH A 10 110 50 HOH HOH . L 3 HOH A 11 111 55 HOH HOH . L 3 HOH A 12 112 76 HOH HOH . L 3 HOH A 13 113 82 HOH HOH . L 3 HOH A 14 114 97 HOH HOH . L 3 HOH A 15 115 103 HOH HOH . L 3 HOH A 16 116 114 HOH HOH . L 3 HOH A 17 117 118 HOH HOH . L 3 HOH A 18 118 120 HOH HOH . L 3 HOH A 19 119 133 HOH HOH . L 3 HOH A 20 120 134 HOH HOH . L 3 HOH A 21 121 137 HOH HOH . L 3 HOH A 22 122 149 HOH HOH . L 3 HOH A 23 123 152 HOH HOH . L 3 HOH A 24 124 156 HOH HOH . L 3 HOH A 25 125 169 HOH HOH . L 3 HOH A 26 126 179 HOH HOH . L 3 HOH A 27 127 192 HOH HOH . L 3 HOH A 28 128 193 HOH HOH . L 3 HOH A 29 129 210 HOH HOH . L 3 HOH A 30 130 213 HOH HOH . L 3 HOH A 31 131 221 HOH HOH . L 3 HOH A 32 132 228 HOH HOH . L 3 HOH A 33 133 231 HOH HOH . L 3 HOH A 34 134 248 HOH HOH . M 3 HOH B 1 101 2 HOH HOH . M 3 HOH B 2 102 17 HOH HOH . M 3 HOH B 3 103 18 HOH HOH . M 3 HOH B 4 104 28 HOH HOH . M 3 HOH B 5 105 34 HOH HOH . M 3 HOH B 6 106 36 HOH HOH . M 3 HOH B 7 107 37 HOH HOH . M 3 HOH B 8 108 39 HOH HOH . M 3 HOH B 9 109 54 HOH HOH . M 3 HOH B 10 110 56 HOH HOH . M 3 HOH B 11 111 63 HOH HOH . M 3 HOH B 12 112 64 HOH HOH . M 3 HOH B 13 113 68 HOH HOH . M 3 HOH B 14 114 70 HOH HOH . M 3 HOH B 15 115 86 HOH HOH . M 3 HOH B 16 116 107 HOH HOH . M 3 HOH B 17 117 116 HOH HOH . M 3 HOH B 18 118 124 HOH HOH . M 3 HOH B 19 119 126 HOH HOH . M 3 HOH B 20 120 128 HOH HOH . M 3 HOH B 21 121 129 HOH HOH . M 3 HOH B 22 122 132 HOH HOH . M 3 HOH B 23 123 148 HOH HOH . M 3 HOH B 24 124 153 HOH HOH . M 3 HOH B 25 125 172 HOH HOH . M 3 HOH B 26 126 174 HOH HOH . M 3 HOH B 27 127 175 HOH HOH . M 3 HOH B 28 128 176 HOH HOH . M 3 HOH B 29 129 199 HOH HOH . M 3 HOH B 30 130 204 HOH HOH . M 3 HOH B 31 131 206 HOH HOH . M 3 HOH B 32 132 207 HOH HOH . M 3 HOH B 33 133 219 HOH HOH . N 3 HOH C 1 201 3 HOH HOH . N 3 HOH C 2 202 9 HOH HOH . N 3 HOH C 3 203 10 HOH HOH . N 3 HOH C 4 204 32 HOH HOH . N 3 HOH C 5 205 53 HOH HOH . N 3 HOH C 6 206 65 HOH HOH . N 3 HOH C 7 207 77 HOH HOH . N 3 HOH C 8 208 79 HOH HOH . N 3 HOH C 9 209 83 HOH HOH . N 3 HOH C 10 210 84 HOH HOH . N 3 HOH C 11 211 89 HOH HOH . N 3 HOH C 12 212 102 HOH HOH . N 3 HOH C 13 213 104 HOH HOH . N 3 HOH C 14 214 106 HOH HOH . N 3 HOH C 15 215 108 HOH HOH . N 3 HOH C 16 216 111 HOH HOH . N 3 HOH C 17 217 123 HOH HOH . N 3 HOH C 18 218 135 HOH HOH . N 3 HOH C 19 219 136 HOH HOH . N 3 HOH C 20 220 146 HOH HOH . N 3 HOH C 21 221 158 HOH HOH . N 3 HOH C 22 222 162 HOH HOH . N 3 HOH C 23 223 177 HOH HOH . N 3 HOH C 24 224 186 HOH HOH . N 3 HOH C 25 225 187 HOH HOH . N 3 HOH C 26 226 188 HOH HOH . N 3 HOH C 27 227 198 HOH HOH . N 3 HOH C 28 228 214 HOH HOH . N 3 HOH C 29 229 216 HOH HOH . N 3 HOH C 30 230 217 HOH HOH . N 3 HOH C 31 231 227 HOH HOH . N 3 HOH C 32 232 232 HOH HOH . N 3 HOH C 33 233 234 HOH HOH . N 3 HOH C 34 234 235 HOH HOH . N 3 HOH C 35 235 238 HOH HOH . N 3 HOH C 36 236 241 HOH HOH . O 3 HOH D 1 101 16 HOH HOH . O 3 HOH D 2 102 23 HOH HOH . O 3 HOH D 3 103 24 HOH HOH . O 3 HOH D 4 104 26 HOH HOH . O 3 HOH D 5 105 35 HOH HOH . O 3 HOH D 6 106 40 HOH HOH . O 3 HOH D 7 107 51 HOH HOH . O 3 HOH D 8 108 59 HOH HOH . O 3 HOH D 9 109 61 HOH HOH . O 3 HOH D 10 110 66 HOH HOH . O 3 HOH D 11 111 67 HOH HOH . O 3 HOH D 12 112 69 HOH HOH . O 3 HOH D 13 113 71 HOH HOH . O 3 HOH D 14 114 72 HOH HOH . O 3 HOH D 15 115 109 HOH HOH . O 3 HOH D 16 116 110 HOH HOH . O 3 HOH D 17 117 112 HOH HOH . O 3 HOH D 18 118 130 HOH HOH . O 3 HOH D 19 119 138 HOH HOH . O 3 HOH D 20 120 165 HOH HOH . O 3 HOH D 21 121 178 HOH HOH . O 3 HOH D 22 122 185 HOH HOH . O 3 HOH D 23 123 194 HOH HOH . O 3 HOH D 24 124 196 HOH HOH . O 3 HOH D 25 125 220 HOH HOH . O 3 HOH D 26 126 229 HOH HOH . O 3 HOH D 27 127 240 HOH HOH . O 3 HOH D 28 128 242 HOH HOH . O 3 HOH D 29 129 245 HOH HOH . O 3 HOH D 30 130 246 HOH HOH . P 3 HOH E 1 101 4 HOH HOH . P 3 HOH E 2 102 7 HOH HOH . P 3 HOH E 3 103 13 HOH HOH . P 3 HOH E 4 104 27 HOH HOH . P 3 HOH E 5 105 29 HOH HOH . P 3 HOH E 6 106 46 HOH HOH . P 3 HOH E 7 107 60 HOH HOH . P 3 HOH E 8 108 87 HOH HOH . P 3 HOH E 9 109 91 HOH HOH . P 3 HOH E 10 110 100 HOH HOH . P 3 HOH E 11 111 121 HOH HOH . P 3 HOH E 12 112 151 HOH HOH . P 3 HOH E 13 113 163 HOH HOH . P 3 HOH E 14 114 170 HOH HOH . P 3 HOH E 15 115 180 HOH HOH . P 3 HOH E 16 116 184 HOH HOH . P 3 HOH E 17 117 191 HOH HOH . P 3 HOH E 18 118 200 HOH HOH . P 3 HOH E 19 119 208 HOH HOH . P 3 HOH E 20 120 209 HOH HOH . P 3 HOH E 21 121 215 HOH HOH . P 3 HOH E 22 122 222 HOH HOH . P 3 HOH E 23 123 223 HOH HOH . P 3 HOH E 24 124 233 HOH HOH . Q 3 HOH F 1 201 12 HOH HOH . Q 3 HOH F 2 202 20 HOH HOH . Q 3 HOH F 3 203 33 HOH HOH . Q 3 HOH F 4 204 42 HOH HOH . Q 3 HOH F 5 205 43 HOH HOH . Q 3 HOH F 6 206 62 HOH HOH . Q 3 HOH F 7 207 81 HOH HOH . Q 3 HOH F 8 208 85 HOH HOH . Q 3 HOH F 9 209 90 HOH HOH . Q 3 HOH F 10 210 95 HOH HOH . Q 3 HOH F 11 211 96 HOH HOH . Q 3 HOH F 12 212 98 HOH HOH . Q 3 HOH F 13 213 119 HOH HOH . Q 3 HOH F 14 214 127 HOH HOH . Q 3 HOH F 15 215 131 HOH HOH . Q 3 HOH F 16 216 139 HOH HOH . Q 3 HOH F 17 217 140 HOH HOH . Q 3 HOH F 18 218 141 HOH HOH . Q 3 HOH F 19 219 142 HOH HOH . Q 3 HOH F 20 220 145 HOH HOH . Q 3 HOH F 21 221 147 HOH HOH . Q 3 HOH F 22 222 160 HOH HOH . Q 3 HOH F 23 223 166 HOH HOH . Q 3 HOH F 24 224 168 HOH HOH . Q 3 HOH F 25 225 171 HOH HOH . Q 3 HOH F 26 226 173 HOH HOH . Q 3 HOH F 27 227 182 HOH HOH . Q 3 HOH F 28 228 183 HOH HOH . Q 3 HOH F 29 229 189 HOH HOH . Q 3 HOH F 30 230 195 HOH HOH . Q 3 HOH F 31 231 203 HOH HOH . Q 3 HOH F 32 232 205 HOH HOH . Q 3 HOH F 33 233 218 HOH HOH . Q 3 HOH F 34 234 249 HOH HOH . R 3 HOH G 1 101 74 HOH HOH . R 3 HOH G 2 102 1 HOH HOH . R 3 HOH G 3 103 6 HOH HOH . R 3 HOH G 4 104 41 HOH HOH . R 3 HOH G 5 105 49 HOH HOH . R 3 HOH G 6 106 52 HOH HOH . R 3 HOH G 7 107 58 HOH HOH . R 3 HOH G 8 108 78 HOH HOH . R 3 HOH G 9 109 92 HOH HOH . R 3 HOH G 10 110 94 HOH HOH . R 3 HOH G 11 111 105 HOH HOH . R 3 HOH G 12 112 115 HOH HOH . R 3 HOH G 13 113 117 HOH HOH . R 3 HOH G 14 114 143 HOH HOH . R 3 HOH G 15 115 150 HOH HOH . R 3 HOH G 16 116 155 HOH HOH . R 3 HOH G 17 117 159 HOH HOH . R 3 HOH G 18 118 161 HOH HOH . R 3 HOH G 19 119 167 HOH HOH . R 3 HOH G 20 120 181 HOH HOH . R 3 HOH G 21 121 190 HOH HOH . R 3 HOH G 22 122 201 HOH HOH . R 3 HOH G 23 123 202 HOH HOH . R 3 HOH G 24 124 211 HOH HOH . R 3 HOH G 25 125 212 HOH HOH . R 3 HOH G 26 126 230 HOH HOH . R 3 HOH G 27 127 236 HOH HOH . R 3 HOH G 28 128 237 HOH HOH . R 3 HOH G 29 129 244 HOH HOH . S 3 HOH H 1 201 239 HOH HOH . S 3 HOH H 2 202 11 HOH HOH . S 3 HOH H 3 203 14 HOH HOH . S 3 HOH H 4 204 15 HOH HOH . S 3 HOH H 5 205 31 HOH HOH . S 3 HOH H 6 206 38 HOH HOH . S 3 HOH H 7 207 44 HOH HOH . S 3 HOH H 8 208 45 HOH HOH . S 3 HOH H 9 209 57 HOH HOH . S 3 HOH H 10 210 73 HOH HOH . S 3 HOH H 11 211 75 HOH HOH . S 3 HOH H 12 212 80 HOH HOH . S 3 HOH H 13 213 88 HOH HOH . S 3 HOH H 14 214 93 HOH HOH . S 3 HOH H 15 215 99 HOH HOH . S 3 HOH H 16 216 101 HOH HOH . S 3 HOH H 17 217 113 HOH HOH . S 3 HOH H 18 218 122 HOH HOH . S 3 HOH H 19 219 125 HOH HOH . S 3 HOH H 20 220 144 HOH HOH . S 3 HOH H 21 221 154 HOH HOH . S 3 HOH H 22 222 157 HOH HOH . S 3 HOH H 23 223 164 HOH HOH . S 3 HOH H 24 224 197 HOH HOH . S 3 HOH H 25 225 224 HOH HOH . S 3 HOH H 26 226 225 HOH HOH . S 3 HOH H 27 227 226 HOH HOH . S 3 HOH H 28 228 243 HOH HOH . S 3 HOH H 29 229 247 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . J 2 -28.003 9.744 7.688 1 25.02 ? C ACT 101 F 1 HETATM 2 O O ACT . . . J 2 -28.669 8.937 8.402 1 25.43 ? O ACT 101 F 1 HETATM 3 O OXT ACT . . . J 2 -28.566 10.257 6.679 1 25.22 ? OXT ACT 101 F 1 HETATM 4 C CH3 ACT . . . J 2 -26.569 10.104 7.968 1 22.81 ? CH3 ACT 101 F 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #