data_3VW7
#
_model_server_result.job_id            JNUmWr6DRfVPSWQ72K2RoA 
_model_server_result.datetime_utc      '2024-10-11 00:29:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3vw7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":2012}' 
#
_entry.id    3VW7 
#
_exptl.entry_id    3VW7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3VW7 
_cell.length_a            44.044 
_cell.length_b            71.46 
_cell.length_c            172.187 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VW7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             M 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 93 A CYS 175 1_555 A SG CYS 172 A CYS 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc1 A OD2 ASP 66 A ASP 148 1_555 M NA NA . A NA 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? 
metalc ? metalc2 A OG SER 107 A SER 189 1_555 M NA NA . A NA 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? 
metalc ? metalc3 A OD2 ASP 444 A ASP 367 1_555 M NA NA . A NA 2012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? 
metalc ? metalc4 M NA NA . A NA 2012 1_555 N O HOH . A HOH 3065 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc5 M NA NA . A NA 2012 1_555 N O HOH . A HOH 3066 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3VW7 
_atom_sites.fract_transf_matrix[1][1]    0.022705 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013994 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005808 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 VPX A 1 2001 2001 VPX VPX . 
C 3 OLC A 1 2002 4001 OLC MOG . 
D 3 OLC A 1 2003 4002 OLC MOG . 
E 3 OLC A 1 2004 4003 OLC MOG . 
F 3 OLC A 1 2005 4004 OLC MOG . 
G 3 OLC A 1 2006 4005 OLC MOG . 
H 3 OLC A 1 2007 4006 OLC MOG . 
I 3 OLC A 1 2008 4007 OLC MOG . 
J 3 OLC A 1 2009 4008 OLC MOG . 
K 3 OLC A 1 2010 4009 OLC MOG . 
L 4 CL A 1 2011 5001 CL CL . 
M 5 NA A 1 2012 5002 NA NA . 
N 6 HOH A 1 3001 3001 HOH HOH . 
N 6 HOH A 2 3002 3003 HOH HOH . 
N 6 HOH A 3 3003 3004 HOH HOH . 
N 6 HOH A 4 3004 3005 HOH HOH . 
N 6 HOH A 5 3005 3006 HOH HOH . 
N 6 HOH A 6 3006 3007 HOH HOH . 
N 6 HOH A 7 3007 3008 HOH HOH . 
N 6 HOH A 8 3008 3009 HOH HOH . 
N 6 HOH A 9 3009 3010 HOH HOH . 
N 6 HOH A 10 3010 3011 HOH HOH . 
N 6 HOH A 11 3011 3012 HOH HOH . 
N 6 HOH A 12 3012 3013 HOH HOH . 
N 6 HOH A 13 3013 3018 HOH HOH . 
N 6 HOH A 14 3014 3020 HOH HOH . 
N 6 HOH A 15 3015 3021 HOH HOH . 
N 6 HOH A 16 3016 3022 HOH HOH . 
N 6 HOH A 17 3017 3023 HOH HOH . 
N 6 HOH A 18 3018 3025 HOH HOH . 
N 6 HOH A 19 3019 3026 HOH HOH . 
N 6 HOH A 20 3020 3027 HOH HOH . 
N 6 HOH A 21 3021 3028 HOH HOH . 
N 6 HOH A 22 3022 3030 HOH HOH . 
N 6 HOH A 23 3023 3031 HOH HOH . 
N 6 HOH A 24 3024 3033 HOH HOH . 
N 6 HOH A 25 3025 3034 HOH HOH . 
N 6 HOH A 26 3026 3040 HOH HOH . 
N 6 HOH A 27 3027 3043 HOH HOH . 
N 6 HOH A 28 3028 3048 HOH HOH . 
N 6 HOH A 29 3029 3049 HOH HOH . 
N 6 HOH A 30 3030 3050 HOH HOH . 
N 6 HOH A 31 3031 3051 HOH HOH . 
N 6 HOH A 32 3032 3052 HOH HOH . 
N 6 HOH A 33 3033 3053 HOH HOH . 
N 6 HOH A 34 3034 3054 HOH HOH . 
N 6 HOH A 35 3035 3055 HOH HOH . 
N 6 HOH A 36 3036 3056 HOH HOH . 
N 6 HOH A 37 3037 3058 HOH HOH . 
N 6 HOH A 38 3038 3059 HOH HOH . 
N 6 HOH A 39 3039 3060 HOH HOH . 
N 6 HOH A 40 3040 3061 HOH HOH . 
N 6 HOH A 41 3041 3064 HOH HOH . 
N 6 HOH A 42 3042 3065 HOH HOH . 
N 6 HOH A 43 3043 3067 HOH HOH . 
N 6 HOH A 44 3044 3068 HOH HOH . 
N 6 HOH A 45 3045 3069 HOH HOH . 
N 6 HOH A 46 3046 3070 HOH HOH . 
N 6 HOH A 47 3047 3071 HOH HOH . 
N 6 HOH A 48 3048 3072 HOH HOH . 
N 6 HOH A 49 3049 3073 HOH HOH . 
N 6 HOH A 50 3050 3076 HOH HOH . 
N 6 HOH A 51 3051 3078 HOH HOH . 
N 6 HOH A 52 3052 3079 HOH HOH . 
N 6 HOH A 53 3053 3081 HOH HOH . 
N 6 HOH A 54 3054 3082 HOH HOH . 
N 6 HOH A 55 3055 3083 HOH HOH . 
N 6 HOH A 56 3056 3084 HOH HOH . 
N 6 HOH A 57 3057 3085 HOH HOH . 
N 6 HOH A 58 3058 3086 HOH HOH . 
N 6 HOH A 59 3059 3087 HOH HOH . 
N 6 HOH A 60 3060 3088 HOH HOH . 
N 6 HOH A 61 3061 3089 HOH HOH . 
N 6 HOH A 62 3062 3090 HOH HOH . 
N 6 HOH A 63 3063 3091 HOH HOH . 
N 6 HOH A 64 3064 3092 HOH HOH . 
N 6 HOH A 65 3065 3101 HOH HOH . 
N 6 HOH A 66 3066 3103 HOH HOH . 
N 6 HOH A 67 3067 3104 HOH HOH . 
N 6 HOH A 68 3068 3105 HOH HOH . 
N 6 HOH A 69 3069 3106 HOH HOH . 
N 6 HOH A 70 3070 3108 HOH HOH . 
N 6 HOH A 71 3071 3109 HOH HOH . 
N 6 HOH A 72 3072 3110 HOH HOH . 
N 6 HOH A 73 3073 3111 HOH HOH . 
N 6 HOH A 74 3074 3112 HOH HOH . 
N 6 HOH A 75 3075 3114 HOH HOH . 
N 6 HOH A 76 3076 3115 HOH HOH . 
N 6 HOH A 77 3077 3116 HOH HOH . 
N 6 HOH A 78 3078 3117 HOH HOH . 
N 6 HOH A 79 3079 3118 HOH HOH . 
N 6 HOH A 80 3080 3119 HOH HOH . 
N 6 HOH A 81 3081 3120 HOH HOH . 
N 6 HOH A 82 3082 3121 HOH HOH . 
N 6 HOH A 83 3083 3122 HOH HOH . 
N 6 HOH A 84 3084 3123 HOH HOH . 
N 6 HOH A 85 3085 3124 HOH HOH . 
N 6 HOH A 86 3086 3125 HOH HOH . 
N 6 HOH A 87 3087 3126 HOH HOH . 
N 6 HOH A 88 3088 3127 HOH HOH . 
N 6 HOH A 89 3089 3128 HOH HOH . 
N 6 HOH A 90 3090 3129 HOH HOH . 
N 6 HOH A 91 3091 3130 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         M 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               -1.551 
_atom_site.Cartn_y               -15.087 
_atom_site.Cartn_z               39.97 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.4 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           2012 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#