data_3VZV
#
_model_server_result.job_id            yeE9JE7s743AaT6uN5nHDA 
_model_server_result.datetime_utc      '2025-03-09 02:33:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3vzv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    3VZV 
#
_exptl.entry_id    3VZV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              571.561 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-{[(5R,6S)-5,6-bis(4-chlorophenyl)-6-methyl-3-(propan-2-yl)-5,6-dihydroimidazo[2,1-b][1,3]thiazol-2-yl]carbonyl}-N,N-dimethyl-L-prolinamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3VZV 
_cell.length_a            58.255 
_cell.length_b            66.076 
_cell.length_c            80.419 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VZV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C 1 1 
B,D 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C29 H32 Cl2 N4 O2 S' 
_chem_comp.formula_weight    571.561 
_chem_comp.id                VZV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-{[(5R,6S)-5,6-bis(4-chlorophenyl)-6-methyl-3-(propan-2-yl)-5,6-dihydroimidazo[2,1-b][1,3]thiazol-2-yl]carbonyl}-N,N-dimethyl-L-prolinamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O10 C6 VZV doub 346 n n 
C6 N7 VZV sing 347 n n 
C6 C4 VZV sing 348 n n 
C8 N7 VZV sing 349 n n 
N7 C9 VZV sing 350 n n 
C4 C3 VZV sing 351 n n 
C4 N5 VZV sing 352 n n 
C3 C2 VZV sing 353 n n 
O43 C42 VZV doub 354 n n 
N5 C42 VZV sing 355 n n 
N5 C1 VZV sing 356 n n 
C2 C1 VZV sing 357 n n 
C42 C37 VZV sing 358 n n 
C37 S36 VZV sing 359 n n 
C37 C38 VZV doub 360 n n 
S36 C34 VZV sing 361 n n 
C41 C39 VZV sing 362 n n 
C38 C39 VZV sing 363 n n 
C38 N35 VZV sing 364 n n 
C40 C39 VZV sing 365 n n 
C34 N35 VZV sing 366 n n 
C34 N33 VZV doub 367 n n 
N35 C31 VZV sing 368 n n 
N33 C32 VZV sing 369 n n 
C31 C32 VZV sing 370 n n 
C31 C24 VZV sing 371 n n 
C32 C44 VZV sing 372 n n 
C32 C15 VZV sing 373 n n 
C25 C24 VZV doub 374 n y 
C25 C26 VZV sing 375 n y 
C24 C23 VZV sing 376 n y 
C26 C21 VZV doub 377 n y 
C15 C14 VZV doub 378 n y 
C15 C16 VZV sing 379 n y 
C14 C13 VZV sing 380 n y 
C23 C22 VZV doub 381 n y 
C21 C22 VZV sing 382 n y 
C21 CL2 VZV sing 383 n n 
C16 C11 VZV doub 384 n y 
C13 C12 VZV doub 385 n y 
C11 C12 VZV sing 386 n y 
C12 CL1 VZV sing 387 n n 
C4 H1 VZV sing 388 n n 
C9 H2 VZV sing 389 n n 
C9 H3 VZV sing 390 n n 
C9 H4 VZV sing 391 n n 
C8 H5 VZV sing 392 n n 
C8 H6 VZV sing 393 n n 
C8 H7 VZV sing 394 n n 
C3 H8 VZV sing 395 n n 
C3 H9 VZV sing 396 n n 
C2 H10 VZV sing 397 n n 
C2 H11 VZV sing 398 n n 
C1 H12 VZV sing 399 n n 
C1 H13 VZV sing 400 n n 
C39 H16 VZV sing 401 n n 
C41 H17 VZV sing 402 n n 
C41 H18 VZV sing 403 n n 
C41 H19 VZV sing 404 n n 
C40 H20 VZV sing 405 n n 
C40 H21 VZV sing 406 n n 
C40 H22 VZV sing 407 n n 
C31 H23 VZV sing 408 n n 
C23 H24 VZV sing 409 n n 
C22 H25 VZV sing 410 n n 
C25 H26 VZV sing 411 n n 
C26 H27 VZV sing 412 n n 
C44 H28 VZV sing 413 n n 
C44 H29 VZV sing 414 n n 
C44 H30 VZV sing 415 n n 
C16 H31 VZV sing 416 n n 
C11 H32 VZV sing 417 n n 
C14 H33 VZV sing 418 n n 
C13 H34 VZV sing 419 n n 
#
_atom_sites.entry_id                     3VZV 
_atom_sites.fract_transf_matrix[1][1]    0.017209 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015097 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012387 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 VZV A 1 200 200 VZV LIG . 
D 2 VZV B 1 201 201 VZV LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O43 VZV . . . D 2 13.118 2.093 -13.939 1 44.48 ? O43 VZV 201 B 1 
HETATM 2 C C42 VZV . . . D 2 13.026 3.149 -13.275 1 46.19 ? C42 VZV 201 B 1 
HETATM 3 N N5 VZV . . . D 2 12.262 4.234 -13.703 1 44.82 ? N5 VZV 201 B 1 
HETATM 4 C C4 VZV . . . D 2 11.473 4.316 -14.969 1 45.68 ? C4 VZV 201 B 1 
HETATM 5 C C6 VZV . . . D 2 12.151 3.899 -16.353 1 51.3 ? C6 VZV 201 B 1 
HETATM 6 O O10 VZV . . . D 2 12.283 4.922 -17.077 1 48.7 ? O10 VZV 201 B 1 
HETATM 7 N N7 VZV . . . D 2 12.58 2.593 -16.798 1 53.89 ? N7 VZV 201 B 1 
HETATM 8 C C9 VZV . . . D 2 13.965 2.202 -17.25 1 45.48 ? C9 VZV 201 B 1 
HETATM 9 C C8 VZV . . . D 2 11.624 1.447 -16.869 1 45.4 ? C8 VZV 201 B 1 
HETATM 10 C C3 VZV . . . D 2 10.938 5.774 -14.941 1 41.94 ? C3 VZV 201 B 1 
HETATM 11 C C2 VZV . . . D 2 10.923 6.204 -13.478 1 39.76 ? C2 VZV 201 B 1 
HETATM 12 C C1 VZV . . . D 2 12.143 5.491 -12.925 1 41.06 ? C1 VZV 201 B 1 
HETATM 13 C C37 VZV . . . D 2 13.847 3.154 -11.961 1 46.17 ? C37 VZV 201 B 1 
HETATM 14 C C38 VZV . . . D 2 13.621 2.036 -10.883 1 43.98 ? C38 VZV 201 B 1 
HETATM 15 C C39 VZV . . . D 2 12.168 1.56 -10.46 1 43.98 ? C39 VZV 201 B 1 
HETATM 16 C C41 VZV . . . D 2 11.081 2.68 -10.418 1 36.08 ? C41 VZV 201 B 1 
HETATM 17 C C40 VZV . . . D 2 11.703 0.209 -11.098 1 40.61 ? C40 VZV 201 B 1 
HETATM 18 N N35 VZV . . . D 2 14.205 2.727 -9.732 1 43.11 ? N35 VZV 201 B 1 
HETATM 19 C C31 VZV . . . D 2 14.241 2.411 -8.317 1 39.04 ? C31 VZV 201 B 1 
HETATM 20 C C24 VZV . . . D 2 13.269 3.202 -7.45 1 37.04 ? C24 VZV 201 B 1 
HETATM 21 C C23 VZV . . . D 2 12.643 2.543 -6.364 1 36.01 ? C23 VZV 201 B 1 
HETATM 22 C C22 VZV . . . D 2 11.802 3.314 -5.548 1 31.84 ? C22 VZV 201 B 1 
HETATM 23 C C25 VZV . . . D 2 13.085 4.589 -7.723 1 35.58 ? C25 VZV 201 B 1 
HETATM 24 C C26 VZV . . . D 2 12.264 5.339 -6.891 1 31.28 ? C26 VZV 201 B 1 
HETATM 25 C C21 VZV . . . D 2 11.654 4.666 -5.835 1 28.38 ? C21 VZV 201 B 1 
HETATM 26 CL CL2 VZV . . . D 2 10.638 5.576 -4.806 1 28.1 ? CL2 VZV 201 B 1 
HETATM 27 S S36 VZV . . . D 2 15.108 4.171 -11.652 1 46.46 ? S36 VZV 201 B 1 
HETATM 28 C C34 VZV . . . D 2 15.259 3.574 -10.027 1 44.74 ? C34 VZV 201 B 1 
HETATM 29 N N33 VZV . . . D 2 16.082 3.748 -9.068 1 39.24 ? N33 VZV 201 B 1 
HETATM 30 C C32 VZV . . . D 2 15.735 2.794 -7.954 1 37.26 ? C32 VZV 201 B 1 
HETATM 31 C C44 VZV . . . D 2 16.639 1.513 -8.121 1 35.29 ? C44 VZV 201 B 1 
HETATM 32 C C15 VZV . . . D 2 15.879 3.528 -6.534 1 35.48 ? C15 VZV 201 B 1 
HETATM 33 C C16 VZV . . . D 2 16.128 2.837 -5.298 1 34.34 ? C16 VZV 201 B 1 
HETATM 34 C C11 VZV . . . D 2 16.261 3.535 -4.09 1 31.57 ? C11 VZV 201 B 1 
HETATM 35 C C14 VZV . . . D 2 15.756 4.945 -6.49 1 34.63 ? C14 VZV 201 B 1 
HETATM 36 C C13 VZV . . . D 2 15.87 5.629 -5.276 1 33.46 ? C13 VZV 201 B 1 
HETATM 37 C C12 VZV . . . D 2 16.118 4.922 -4.086 1 32.3 ? C12 VZV 201 B 1 
HETATM 38 CL CL1 VZV . . . D 2 16.268 5.826 -2.578 1 35.17 ? CL1 VZV 201 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           38 
#