data_3W00
#
_model_server_result.job_id            pLafX43VN4A5gBDV0i0sVQ 
_model_server_result.datetime_utc      '2025-03-06 07:50:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3w00 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    3W00 
#
_exptl.entry_id    3W00 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.392 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.15 
_cell.angle_gamma         90 
_cell.entry_id            3W00 
_cell.length_a            54.147 
_cell.length_b            56.392 
_cell.length_c            77.7 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3W00 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C15 H28 O6 P2 S' 
_chem_comp.formula_weight    398.392 
_chem_comp.id                FPS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'FARNESYL THIOPYROPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 S1 FPS sing 101 n n 
C1 C2 FPS sing 102 n n 
C1 H11 FPS sing 103 n n 
C1 H12A FPS sing 104 n n 
S1 PA FPS sing 105 n n 
C2 C3 FPS doub 106 e n 
C2 H2 FPS sing 107 n n 
C3 C4 FPS sing 108 n n 
C3 C5 FPS sing 109 n n 
C4 H41 FPS sing 110 n n 
C4 H42 FPS sing 111 n n 
C4 H43 FPS sing 112 n n 
C5 C6 FPS sing 113 n n 
C5 H51 FPS sing 114 n n 
C5 H52 FPS sing 115 n n 
C6 C7 FPS sing 116 n n 
C6 H61 FPS sing 117 n n 
C6 H62 FPS sing 118 n n 
C7 C8 FPS doub 119 e n 
C7 H7 FPS sing 120 n n 
C8 C10 FPS sing 121 n n 
C8 C9 FPS sing 122 n n 
C10 C11 FPS sing 123 n n 
C10 H101 FPS sing 124 n n 
C10 H102 FPS sing 125 n n 
C9 H91 FPS sing 126 n n 
C9 H92 FPS sing 127 n n 
C9 H93 FPS sing 128 n n 
C11 C12 FPS sing 129 n n 
C11 H111 FPS sing 130 n n 
C11 H112 FPS sing 131 n n 
C12 C13 FPS doub 132 n n 
C12 H12 FPS sing 133 n n 
C13 C14 FPS sing 134 n n 
C13 C15 FPS sing 135 n n 
C14 H141 FPS sing 136 n n 
C14 H142 FPS sing 137 n n 
C14 H143 FPS sing 138 n n 
C15 H151 FPS sing 139 n n 
C15 H152 FPS sing 140 n n 
C15 H153 FPS sing 141 n n 
PA O1A FPS doub 142 n n 
PA O2A FPS sing 143 n n 
PA O3A FPS sing 144 n n 
O2A H2A FPS sing 145 n n 
O3A PB FPS sing 146 n n 
PB O1B FPS sing 147 n n 
PB O2B FPS doub 148 n n 
PB O3B FPS sing 149 n n 
O1B H1B FPS sing 150 n n 
O3B H3B FPS sing 151 n n 
#
_atom_sites.entry_id                     3W00 
_atom_sites.fract_transf_matrix[1][1]    0.018468 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006054 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017733 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013544 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PO4 A 1 600 600 PO4 PO4 . 
D 3 FPS B 1 301 500 FPS FSP . 
E 4 1GP B 1 302 600 1GP G1P . 
F 5 HOH A 1 701 1 HOH HOH . 
F 5 HOH A 2 702 2 HOH HOH . 
F 5 HOH A 3 703 3 HOH HOH . 
F 5 HOH A 4 704 4 HOH HOH . 
F 5 HOH A 5 705 5 HOH HOH . 
F 5 HOH A 6 706 6 HOH HOH . 
F 5 HOH A 7 707 36 HOH HOH . 
F 5 HOH A 8 708 37 HOH HOH . 
F 5 HOH A 9 709 38 HOH HOH . 
F 5 HOH A 10 710 39 HOH HOH . 
F 5 HOH A 11 711 40 HOH HOH . 
F 5 HOH A 12 712 41 HOH HOH . 
F 5 HOH A 13 713 42 HOH HOH . 
F 5 HOH A 14 714 43 HOH HOH . 
F 5 HOH A 15 715 44 HOH HOH . 
F 5 HOH A 16 716 45 HOH HOH . 
F 5 HOH A 17 717 46 HOH HOH . 
F 5 HOH A 18 718 50 HOH HOH . 
F 5 HOH A 19 719 51 HOH HOH . 
F 5 HOH A 20 720 52 HOH HOH . 
F 5 HOH A 21 721 53 HOH HOH . 
F 5 HOH A 22 722 54 HOH HOH . 
F 5 HOH A 23 723 55 HOH HOH . 
F 5 HOH A 24 724 56 HOH HOH . 
F 5 HOH A 25 725 57 HOH HOH . 
F 5 HOH A 26 726 58 HOH HOH . 
F 5 HOH A 27 727 59 HOH HOH . 
F 5 HOH A 28 728 60 HOH HOH . 
F 5 HOH A 29 729 62 HOH HOH . 
F 5 HOH A 30 730 63 HOH HOH . 
F 5 HOH A 31 731 64 HOH HOH . 
F 5 HOH A 32 732 65 HOH HOH . 
F 5 HOH A 33 733 66 HOH HOH . 
F 5 HOH A 34 734 67 HOH HOH . 
F 5 HOH A 35 735 68 HOH HOH . 
F 5 HOH A 36 736 69 HOH HOH . 
F 5 HOH A 37 737 70 HOH HOH . 
F 5 HOH A 38 738 71 HOH HOH . 
F 5 HOH A 39 739 72 HOH HOH . 
F 5 HOH A 40 740 85 HOH HOH . 
F 5 HOH A 41 741 86 HOH HOH . 
F 5 HOH A 42 742 87 HOH HOH . 
F 5 HOH A 43 743 88 HOH HOH . 
F 5 HOH A 44 744 89 HOH HOH . 
F 5 HOH A 45 745 90 HOH HOH . 
F 5 HOH A 46 746 91 HOH HOH . 
F 5 HOH A 47 747 93 HOH HOH . 
F 5 HOH A 48 748 94 HOH HOH . 
F 5 HOH A 49 749 103 HOH HOH . 
F 5 HOH A 50 750 104 HOH HOH . 
F 5 HOH A 51 751 105 HOH HOH . 
F 5 HOH A 52 752 106 HOH HOH . 
F 5 HOH A 53 753 107 HOH HOH . 
F 5 HOH A 54 754 108 HOH HOH . 
F 5 HOH A 55 755 109 HOH HOH . 
F 5 HOH A 56 756 110 HOH HOH . 
F 5 HOH A 57 757 111 HOH HOH . 
F 5 HOH A 58 758 112 HOH HOH . 
F 5 HOH A 59 759 113 HOH HOH . 
F 5 HOH A 60 760 114 HOH HOH . 
F 5 HOH A 61 761 116 HOH HOH . 
F 5 HOH A 62 762 117 HOH HOH . 
F 5 HOH A 63 763 120 HOH HOH . 
F 5 HOH A 64 764 121 HOH HOH . 
F 5 HOH A 65 765 129 HOH HOH . 
F 5 HOH A 66 766 144 HOH HOH . 
F 5 HOH A 67 767 145 HOH HOH . 
F 5 HOH A 68 768 146 HOH HOH . 
F 5 HOH A 69 769 147 HOH HOH . 
F 5 HOH A 70 770 148 HOH HOH . 
F 5 HOH A 71 771 149 HOH HOH . 
F 5 HOH A 72 772 150 HOH HOH . 
F 5 HOH A 73 773 153 HOH HOH . 
G 5 HOH B 1 401 7 HOH HOH . 
G 5 HOH B 2 402 8 HOH HOH . 
G 5 HOH B 3 403 9 HOH HOH . 
G 5 HOH B 4 404 10 HOH HOH . 
G 5 HOH B 5 405 11 HOH HOH . 
G 5 HOH B 6 406 12 HOH HOH . 
G 5 HOH B 7 407 13 HOH HOH . 
G 5 HOH B 8 408 14 HOH HOH . 
G 5 HOH B 9 409 15 HOH HOH . 
G 5 HOH B 10 410 16 HOH HOH . 
G 5 HOH B 11 411 17 HOH HOH . 
G 5 HOH B 12 412 18 HOH HOH . 
G 5 HOH B 13 413 19 HOH HOH . 
G 5 HOH B 14 414 20 HOH HOH . 
G 5 HOH B 15 415 21 HOH HOH . 
G 5 HOH B 16 416 22 HOH HOH . 
G 5 HOH B 17 417 23 HOH HOH . 
G 5 HOH B 18 418 24 HOH HOH . 
G 5 HOH B 19 419 25 HOH HOH . 
G 5 HOH B 20 420 26 HOH HOH . 
G 5 HOH B 21 421 27 HOH HOH . 
G 5 HOH B 22 422 28 HOH HOH . 
G 5 HOH B 23 423 29 HOH HOH . 
G 5 HOH B 24 424 30 HOH HOH . 
G 5 HOH B 25 425 31 HOH HOH . 
G 5 HOH B 26 426 32 HOH HOH . 
G 5 HOH B 27 427 33 HOH HOH . 
G 5 HOH B 28 428 34 HOH HOH . 
G 5 HOH B 29 429 35 HOH HOH . 
G 5 HOH B 30 430 47 HOH HOH . 
G 5 HOH B 31 431 48 HOH HOH . 
G 5 HOH B 32 432 49 HOH HOH . 
G 5 HOH B 33 433 61 HOH HOH . 
G 5 HOH B 34 434 73 HOH HOH . 
G 5 HOH B 35 435 74 HOH HOH . 
G 5 HOH B 36 436 75 HOH HOH . 
G 5 HOH B 37 437 76 HOH HOH . 
G 5 HOH B 38 438 77 HOH HOH . 
G 5 HOH B 39 439 78 HOH HOH . 
G 5 HOH B 40 440 79 HOH HOH . 
G 5 HOH B 41 441 80 HOH HOH . 
G 5 HOH B 42 442 81 HOH HOH . 
G 5 HOH B 43 443 82 HOH HOH . 
G 5 HOH B 44 444 83 HOH HOH . 
G 5 HOH B 45 445 84 HOH HOH . 
G 5 HOH B 46 446 92 HOH HOH . 
G 5 HOH B 47 447 95 HOH HOH . 
G 5 HOH B 48 448 96 HOH HOH . 
G 5 HOH B 49 449 97 HOH HOH . 
G 5 HOH B 50 450 98 HOH HOH . 
G 5 HOH B 51 451 99 HOH HOH . 
G 5 HOH B 52 452 100 HOH HOH . 
G 5 HOH B 53 453 101 HOH HOH . 
G 5 HOH B 54 454 102 HOH HOH . 
G 5 HOH B 55 455 115 HOH HOH . 
G 5 HOH B 56 456 118 HOH HOH . 
G 5 HOH B 57 457 119 HOH HOH . 
G 5 HOH B 58 458 122 HOH HOH . 
G 5 HOH B 59 459 123 HOH HOH . 
G 5 HOH B 60 460 124 HOH HOH . 
G 5 HOH B 61 461 125 HOH HOH . 
G 5 HOH B 62 462 126 HOH HOH . 
G 5 HOH B 63 463 127 HOH HOH . 
G 5 HOH B 64 464 128 HOH HOH . 
G 5 HOH B 65 465 130 HOH HOH . 
G 5 HOH B 66 466 131 HOH HOH . 
G 5 HOH B 67 467 132 HOH HOH . 
G 5 HOH B 68 468 133 HOH HOH . 
G 5 HOH B 69 469 134 HOH HOH . 
G 5 HOH B 70 470 135 HOH HOH . 
G 5 HOH B 71 471 136 HOH HOH . 
G 5 HOH B 72 472 137 HOH HOH . 
G 5 HOH B 73 473 138 HOH HOH . 
G 5 HOH B 74 474 139 HOH HOH . 
G 5 HOH B 75 475 140 HOH HOH . 
G 5 HOH B 76 476 141 HOH HOH . 
G 5 HOH B 77 477 142 HOH HOH . 
G 5 HOH B 78 478 143 HOH HOH . 
G 5 HOH B 79 479 151 HOH HOH . 
G 5 HOH B 80 480 152 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 FPS . . . D 3 -2.559 -11.847 31.304 1 78.92 ? C1 FPS 301 B 1 
HETATM 2 S S1 FPS . . . D 3 -4.331 -11.408 31.532 1 83.63 ? S1 FPS 301 B 1 
HETATM 3 C C2 FPS . . . D 3 -2.24 -12.02 29.807 1 74.72 ? C2 FPS 301 B 1 
HETATM 4 C C3 FPS . . . D 3 -2.395 -13.147 29.095 1 71.03 ? C3 FPS 301 B 1 
HETATM 5 C C4 FPS . . . D 3 -2.931 -14.441 29.721 1 71.56 ? C4 FPS 301 B 1 
HETATM 6 C C5 FPS . . . D 3 -2.009 -13.072 27.625 1 68.21 ? C5 FPS 301 B 1 
HETATM 7 C C6 FPS . . . D 3 -2.074 -14.401 26.806 1 65.02 ? C6 FPS 301 B 1 
HETATM 8 C C7 FPS . . . D 3 -2.607 -14.091 25.406 1 61.39 ? C7 FPS 301 B 1 
HETATM 9 C C8 FPS . . . D 3 -1.934 -14.117 24.244 1 59.07 ? C8 FPS 301 B 1 
HETATM 10 C C10 FPS . . . D 3 -2.731 -13.75 23.01 1 57.32 ? C10 FPS 301 B 1 
HETATM 11 C C9 FPS . . . D 3 -0.458 -14.475 24.112 1 58.82 ? C9 FPS 301 B 1 
HETATM 12 C C11 FPS . . . D 3 -2.764 -14.79 21.896 1 54.61 ? C11 FPS 301 B 1 
HETATM 13 C C12 FPS . . . D 3 -2.971 -14.007 20.618 1 51.71 ? C12 FPS 301 B 1 
HETATM 14 C C13 FPS . . . D 3 -4.042 -14.033 19.848 1 50.41 ? C13 FPS 301 B 1 
HETATM 15 C C14 FPS . . . D 3 -5.276 -14.885 20.137 1 49.3 ? C14 FPS 301 B 1 
HETATM 16 C C15 FPS . . . D 3 -4.026 -13.165 18.62 1 49.66 ? C15 FPS 301 B 1 
HETATM 17 P PA FPS . . . D 3 -5.079 -11.095 33.394 1 84.9 ? PA FPS 301 B 1 
HETATM 18 O O1A FPS . . . D 3 -6.564 -10.762 33.195 1 85.37 ? O1A FPS 301 B 1 
HETATM 19 O O2A FPS . . . D 3 -4.385 -9.902 34.003 1 84.3 ? O2A FPS 301 B 1 
HETATM 20 O O3A FPS . . . D 3 -4.895 -12.373 34.424 1 86 ? O3A FPS 301 B 1 
HETATM 21 P PB FPS . . . D 3 -5.925 -12.797 35.649 1 87.92 ? PB FPS 301 B 1 
HETATM 22 O O1B FPS . . . D 3 -7.267 -13.19 35.007 1 88.28 ? O1B FPS 301 B 1 
HETATM 23 O O2B FPS . . . D 3 -5.404 -14.011 36.434 1 86.65 ? O2B FPS 301 B 1 
HETATM 24 O O3B FPS . . . D 3 -6.16 -11.602 36.603 1 86.95 ? O3B FPS 301 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           24 
#