data_3W00 # _model_server_result.job_id WGxfGt6KUbFHMRWkUEiqJA _model_server_result.datetime_utc '2025-03-06 07:31:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w00 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 3W00 # _exptl.entry_id 3W00 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.15 _cell.angle_gamma 90 _cell.entry_id 3W00 _cell.length_a 54.147 _cell.length_b 56.392 _cell.length_c 77.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W00 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 329 n n P O2 PO4 sing 330 n n P O3 PO4 sing 331 n n P O4 PO4 sing 332 n n # _atom_sites.entry_id 3W00 _atom_sites.fract_transf_matrix[1][1] 0.018468 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006054 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017733 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 600 600 PO4 PO4 . D 3 FPS B 1 301 500 FPS FSP . E 4 1GP B 1 302 600 1GP G1P . F 5 HOH A 1 701 1 HOH HOH . F 5 HOH A 2 702 2 HOH HOH . F 5 HOH A 3 703 3 HOH HOH . F 5 HOH A 4 704 4 HOH HOH . F 5 HOH A 5 705 5 HOH HOH . F 5 HOH A 6 706 6 HOH HOH . F 5 HOH A 7 707 36 HOH HOH . F 5 HOH A 8 708 37 HOH HOH . F 5 HOH A 9 709 38 HOH HOH . F 5 HOH A 10 710 39 HOH HOH . F 5 HOH A 11 711 40 HOH HOH . F 5 HOH A 12 712 41 HOH HOH . F 5 HOH A 13 713 42 HOH HOH . F 5 HOH A 14 714 43 HOH HOH . F 5 HOH A 15 715 44 HOH HOH . F 5 HOH A 16 716 45 HOH HOH . F 5 HOH A 17 717 46 HOH HOH . F 5 HOH A 18 718 50 HOH HOH . F 5 HOH A 19 719 51 HOH HOH . F 5 HOH A 20 720 52 HOH HOH . F 5 HOH A 21 721 53 HOH HOH . F 5 HOH A 22 722 54 HOH HOH . F 5 HOH A 23 723 55 HOH HOH . F 5 HOH A 24 724 56 HOH HOH . F 5 HOH A 25 725 57 HOH HOH . F 5 HOH A 26 726 58 HOH HOH . F 5 HOH A 27 727 59 HOH HOH . F 5 HOH A 28 728 60 HOH HOH . F 5 HOH A 29 729 62 HOH HOH . F 5 HOH A 30 730 63 HOH HOH . F 5 HOH A 31 731 64 HOH HOH . F 5 HOH A 32 732 65 HOH HOH . F 5 HOH A 33 733 66 HOH HOH . F 5 HOH A 34 734 67 HOH HOH . F 5 HOH A 35 735 68 HOH HOH . F 5 HOH A 36 736 69 HOH HOH . F 5 HOH A 37 737 70 HOH HOH . F 5 HOH A 38 738 71 HOH HOH . F 5 HOH A 39 739 72 HOH HOH . F 5 HOH A 40 740 85 HOH HOH . F 5 HOH A 41 741 86 HOH HOH . F 5 HOH A 42 742 87 HOH HOH . F 5 HOH A 43 743 88 HOH HOH . F 5 HOH A 44 744 89 HOH HOH . F 5 HOH A 45 745 90 HOH HOH . F 5 HOH A 46 746 91 HOH HOH . F 5 HOH A 47 747 93 HOH HOH . F 5 HOH A 48 748 94 HOH HOH . F 5 HOH A 49 749 103 HOH HOH . F 5 HOH A 50 750 104 HOH HOH . F 5 HOH A 51 751 105 HOH HOH . F 5 HOH A 52 752 106 HOH HOH . F 5 HOH A 53 753 107 HOH HOH . F 5 HOH A 54 754 108 HOH HOH . F 5 HOH A 55 755 109 HOH HOH . F 5 HOH A 56 756 110 HOH HOH . F 5 HOH A 57 757 111 HOH HOH . F 5 HOH A 58 758 112 HOH HOH . F 5 HOH A 59 759 113 HOH HOH . F 5 HOH A 60 760 114 HOH HOH . F 5 HOH A 61 761 116 HOH HOH . F 5 HOH A 62 762 117 HOH HOH . F 5 HOH A 63 763 120 HOH HOH . F 5 HOH A 64 764 121 HOH HOH . F 5 HOH A 65 765 129 HOH HOH . F 5 HOH A 66 766 144 HOH HOH . F 5 HOH A 67 767 145 HOH HOH . F 5 HOH A 68 768 146 HOH HOH . F 5 HOH A 69 769 147 HOH HOH . F 5 HOH A 70 770 148 HOH HOH . F 5 HOH A 71 771 149 HOH HOH . F 5 HOH A 72 772 150 HOH HOH . F 5 HOH A 73 773 153 HOH HOH . G 5 HOH B 1 401 7 HOH HOH . G 5 HOH B 2 402 8 HOH HOH . G 5 HOH B 3 403 9 HOH HOH . G 5 HOH B 4 404 10 HOH HOH . G 5 HOH B 5 405 11 HOH HOH . G 5 HOH B 6 406 12 HOH HOH . G 5 HOH B 7 407 13 HOH HOH . G 5 HOH B 8 408 14 HOH HOH . G 5 HOH B 9 409 15 HOH HOH . G 5 HOH B 10 410 16 HOH HOH . G 5 HOH B 11 411 17 HOH HOH . G 5 HOH B 12 412 18 HOH HOH . G 5 HOH B 13 413 19 HOH HOH . G 5 HOH B 14 414 20 HOH HOH . G 5 HOH B 15 415 21 HOH HOH . G 5 HOH B 16 416 22 HOH HOH . G 5 HOH B 17 417 23 HOH HOH . G 5 HOH B 18 418 24 HOH HOH . G 5 HOH B 19 419 25 HOH HOH . G 5 HOH B 20 420 26 HOH HOH . G 5 HOH B 21 421 27 HOH HOH . G 5 HOH B 22 422 28 HOH HOH . G 5 HOH B 23 423 29 HOH HOH . G 5 HOH B 24 424 30 HOH HOH . G 5 HOH B 25 425 31 HOH HOH . G 5 HOH B 26 426 32 HOH HOH . G 5 HOH B 27 427 33 HOH HOH . G 5 HOH B 28 428 34 HOH HOH . G 5 HOH B 29 429 35 HOH HOH . G 5 HOH B 30 430 47 HOH HOH . G 5 HOH B 31 431 48 HOH HOH . G 5 HOH B 32 432 49 HOH HOH . G 5 HOH B 33 433 61 HOH HOH . G 5 HOH B 34 434 73 HOH HOH . G 5 HOH B 35 435 74 HOH HOH . G 5 HOH B 36 436 75 HOH HOH . G 5 HOH B 37 437 76 HOH HOH . G 5 HOH B 38 438 77 HOH HOH . G 5 HOH B 39 439 78 HOH HOH . G 5 HOH B 40 440 79 HOH HOH . G 5 HOH B 41 441 80 HOH HOH . G 5 HOH B 42 442 81 HOH HOH . G 5 HOH B 43 443 82 HOH HOH . G 5 HOH B 44 444 83 HOH HOH . G 5 HOH B 45 445 84 HOH HOH . G 5 HOH B 46 446 92 HOH HOH . G 5 HOH B 47 447 95 HOH HOH . G 5 HOH B 48 448 96 HOH HOH . G 5 HOH B 49 449 97 HOH HOH . G 5 HOH B 50 450 98 HOH HOH . G 5 HOH B 51 451 99 HOH HOH . G 5 HOH B 52 452 100 HOH HOH . G 5 HOH B 53 453 101 HOH HOH . G 5 HOH B 54 454 102 HOH HOH . G 5 HOH B 55 455 115 HOH HOH . G 5 HOH B 56 456 118 HOH HOH . G 5 HOH B 57 457 119 HOH HOH . G 5 HOH B 58 458 122 HOH HOH . G 5 HOH B 59 459 123 HOH HOH . G 5 HOH B 60 460 124 HOH HOH . G 5 HOH B 61 461 125 HOH HOH . G 5 HOH B 62 462 126 HOH HOH . G 5 HOH B 63 463 127 HOH HOH . G 5 HOH B 64 464 128 HOH HOH . G 5 HOH B 65 465 130 HOH HOH . G 5 HOH B 66 466 131 HOH HOH . G 5 HOH B 67 467 132 HOH HOH . G 5 HOH B 68 468 133 HOH HOH . G 5 HOH B 69 469 134 HOH HOH . G 5 HOH B 70 470 135 HOH HOH . G 5 HOH B 71 471 136 HOH HOH . G 5 HOH B 72 472 137 HOH HOH . G 5 HOH B 73 473 138 HOH HOH . G 5 HOH B 74 474 139 HOH HOH . G 5 HOH B 75 475 140 HOH HOH . G 5 HOH B 76 476 141 HOH HOH . G 5 HOH B 77 477 142 HOH HOH . G 5 HOH B 78 478 143 HOH HOH . G 5 HOH B 79 479 151 HOH HOH . G 5 HOH B 80 480 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 21.265 -22.371 -4.313 1 43.55 ? P PO4 600 A 1 HETATM 2 O O1 PO4 . . . C 2 21.118 -21.9 -5.775 1 42.56 ? O1 PO4 600 A 1 HETATM 3 O O2 PO4 . . . C 2 20.455 -23.68 -4.077 1 44.64 ? O2 PO4 600 A 1 HETATM 4 O O3 PO4 . . . C 2 22.738 -22.856 -4.099 1 43.97 ? O3 PO4 600 A 1 HETATM 5 O O4 PO4 . . . C 2 20.764 -21.154 -3.282 1 38.35 ? O4 PO4 600 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #