data_3W0C # _model_server_result.job_id 5vbvDLwBJP75ZScqmo-_Yg _model_server_result.datetime_utc '2025-08-01 00:02:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w0c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 3W0C # _exptl.entry_id 3W0C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 576.568 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(4S)-4-hydroxy-5-[2-methyl-4-(3-{3-methyl-4-[(1E)-4,4,4-trifluoro-3-hydroxy-3-(trifluoromethyl)but-1-en-1-yl]phenyl}pentan-3-yl)phenoxy]pentanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W0C _cell.length_a 44.37 _cell.length_b 51.917 _cell.length_c 132.087 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W0C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H34 F6 O5' _chem_comp.formula_weight 576.568 _chem_comp.id 6DS _chem_comp.mon_nstd_flag . _chem_comp.name '(4S)-4-hydroxy-5-[2-methyl-4-(3-{3-methyl-4-[(1E)-4,4,4-trifluoro-3-hydroxy-3-(trifluoromethyl)but-1-en-1-yl]phenyl}pentan-3-yl)phenoxy]pentanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C12 6DS sing 1 n n F1 C8 6DS sing 2 n n F2 C8 6DS sing 3 n n C12 C10 6DS sing 4 n n C8 F3 6DS sing 5 n n C8 C44 6DS sing 6 n n C30 C29 6DS doub 7 n y C30 C11 6DS sing 8 n y C5 C6 6DS doub 9 n y C5 C4 6DS sing 10 n y C29 C28 6DS sing 11 n y C6 C1 6DS sing 12 n y C10 C4 6DS sing 13 n n C10 C11 6DS sing 14 n n C10 C13 6DS sing 15 n n C4 C3 6DS doub 16 n y C63 O62 6DS sing 17 n n C63 C64 6DS sing 18 n n C11 C26 6DS doub 19 n y C43 C44 6DS sing 20 n n C43 C7 6DS doub 21 e n C1 O62 6DS sing 22 n n C1 C2 6DS doub 23 n y C28 C7 6DS sing 24 n n C28 C27 6DS doub 25 n y C44 O47 6DS sing 26 n n C44 C48 6DS sing 27 n n C67 C64 6DS sing 28 n n C67 C17 6DS sing 29 n n C3 C2 6DS sing 30 n y F5 C48 6DS sing 31 n n C64 O1 6DS sing 32 n n C26 C27 6DS sing 33 n y C2 C34 6DS sing 34 n n C27 C9 6DS sing 35 n n C17 C16 6DS sing 36 n n C13 C14 6DS sing 37 n n C48 F4 6DS sing 38 n n C48 F6 6DS sing 39 n n C16 O71 6DS doub 40 n n C16 O2 6DS sing 41 n n O1 H1 6DS sing 42 n n O2 H2 6DS sing 43 n n C3 H3 6DS sing 44 n n C5 H4 6DS sing 45 n n C6 H5 6DS sing 46 n n C7 H6 6DS sing 47 n n C9 H7 6DS sing 48 n n C9 H8 6DS sing 49 n n C9 H9 6DS sing 50 n n C12 H10 6DS sing 51 n n C12 H11 6DS sing 52 n n C13 H12 6DS sing 53 n n C13 H13 6DS sing 54 n n C14 H14 6DS sing 55 n n C14 H15 6DS sing 56 n n C14 H16 6DS sing 57 n n C17 H17 6DS sing 58 n n C17 H18 6DS sing 59 n n C20 H19 6DS sing 60 n n C20 H20 6DS sing 61 n n C20 H21 6DS sing 62 n n C26 H22 6DS sing 63 n n C29 H23 6DS sing 64 n n C30 H24 6DS sing 65 n n C34 H25 6DS sing 66 n n C34 H26 6DS sing 67 n n C34 H27 6DS sing 68 n n C43 H28 6DS sing 69 n n O47 H29 6DS sing 70 n n C63 H30 6DS sing 71 n n C63 H31 6DS sing 72 n n C64 H32 6DS sing 73 n n C67 H33 6DS sing 74 n n C67 H34 6DS sing 75 n n # _atom_sites.entry_id 3W0C _atom_sites.fract_transf_matrix[1][1] 0.022538 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019262 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007571 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6DS A 1 501 1 6DS DS6 . C 3 HOH A 1 601 1 HOH HOH . C 3 HOH A 2 602 2 HOH HOH . C 3 HOH A 3 603 3 HOH HOH . C 3 HOH A 4 604 4 HOH HOH . C 3 HOH A 5 605 5 HOH HOH . C 3 HOH A 6 606 6 HOH HOH . C 3 HOH A 7 607 7 HOH HOH . C 3 HOH A 8 608 8 HOH HOH . C 3 HOH A 9 609 9 HOH HOH . C 3 HOH A 10 610 10 HOH HOH . C 3 HOH A 11 611 11 HOH HOH . C 3 HOH A 12 612 12 HOH HOH . C 3 HOH A 13 613 13 HOH HOH . C 3 HOH A 14 614 14 HOH HOH . C 3 HOH A 15 615 15 HOH HOH . C 3 HOH A 16 616 16 HOH HOH . C 3 HOH A 17 617 17 HOH HOH . C 3 HOH A 18 618 18 HOH HOH . C 3 HOH A 19 619 19 HOH HOH . C 3 HOH A 20 620 20 HOH HOH . C 3 HOH A 21 621 21 HOH HOH . C 3 HOH A 22 622 22 HOH HOH . C 3 HOH A 23 623 23 HOH HOH . C 3 HOH A 24 624 24 HOH HOH . C 3 HOH A 25 625 25 HOH HOH . C 3 HOH A 26 626 26 HOH HOH . C 3 HOH A 27 627 27 HOH HOH . C 3 HOH A 28 628 28 HOH HOH . C 3 HOH A 29 629 29 HOH HOH . C 3 HOH A 30 630 30 HOH HOH . C 3 HOH A 31 631 31 HOH HOH . C 3 HOH A 32 632 32 HOH HOH . C 3 HOH A 33 633 33 HOH HOH . C 3 HOH A 34 634 34 HOH HOH . C 3 HOH A 35 635 35 HOH HOH . C 3 HOH A 36 636 36 HOH HOH . C 3 HOH A 37 637 37 HOH HOH . C 3 HOH A 38 638 38 HOH HOH . C 3 HOH A 39 639 39 HOH HOH . C 3 HOH A 40 640 40 HOH HOH . C 3 HOH A 41 641 41 HOH HOH . C 3 HOH A 42 642 42 HOH HOH . C 3 HOH A 43 643 43 HOH HOH . C 3 HOH A 44 644 44 HOH HOH . C 3 HOH A 45 645 45 HOH HOH . C 3 HOH A 46 646 46 HOH HOH . C 3 HOH A 47 647 47 HOH HOH . C 3 HOH A 48 648 48 HOH HOH . C 3 HOH A 49 649 49 HOH HOH . C 3 HOH A 50 650 50 HOH HOH . C 3 HOH A 51 651 51 HOH HOH . C 3 HOH A 52 652 52 HOH HOH . C 3 HOH A 53 653 53 HOH HOH . C 3 HOH A 54 654 54 HOH HOH . C 3 HOH A 55 655 55 HOH HOH . C 3 HOH A 56 656 56 HOH HOH . C 3 HOH A 57 657 57 HOH HOH . C 3 HOH A 58 658 58 HOH HOH . C 3 HOH A 59 659 59 HOH HOH . C 3 HOH A 60 660 60 HOH HOH . C 3 HOH A 61 661 61 HOH HOH . C 3 HOH A 62 662 62 HOH HOH . C 3 HOH A 63 663 63 HOH HOH . C 3 HOH A 64 664 64 HOH HOH . C 3 HOH A 65 665 65 HOH HOH . C 3 HOH A 66 666 66 HOH HOH . C 3 HOH A 67 667 67 HOH HOH . C 3 HOH A 68 668 68 HOH HOH . C 3 HOH A 69 669 69 HOH HOH . C 3 HOH A 70 670 70 HOH HOH . C 3 HOH A 71 671 71 HOH HOH . C 3 HOH A 72 672 72 HOH HOH . C 3 HOH A 73 673 73 HOH HOH . C 3 HOH A 74 674 74 HOH HOH . C 3 HOH A 75 675 75 HOH HOH . C 3 HOH A 76 676 76 HOH HOH . C 3 HOH A 77 677 77 HOH HOH . C 3 HOH A 78 678 78 HOH HOH . C 3 HOH A 79 679 79 HOH HOH . C 3 HOH A 80 680 80 HOH HOH . C 3 HOH A 81 681 81 HOH HOH . C 3 HOH A 82 682 82 HOH HOH . C 3 HOH A 83 683 83 HOH HOH . C 3 HOH A 84 684 84 HOH HOH . C 3 HOH A 85 685 85 HOH HOH . C 3 HOH A 86 686 86 HOH HOH . C 3 HOH A 87 687 87 HOH HOH . C 3 HOH A 88 688 88 HOH HOH . C 3 HOH A 89 689 89 HOH HOH . C 3 HOH A 90 690 90 HOH HOH . C 3 HOH A 91 691 91 HOH HOH . C 3 HOH A 92 692 92 HOH HOH . C 3 HOH A 93 693 93 HOH HOH . C 3 HOH A 94 694 94 HOH HOH . C 3 HOH A 95 695 95 HOH HOH . C 3 HOH A 96 696 96 HOH HOH . C 3 HOH A 97 697 97 HOH HOH . C 3 HOH A 98 698 98 HOH HOH . C 3 HOH A 99 699 99 HOH HOH . C 3 HOH A 100 700 100 HOH HOH . C 3 HOH A 101 701 101 HOH HOH . C 3 HOH A 102 702 102 HOH HOH . C 3 HOH A 103 703 103 HOH HOH . C 3 HOH A 104 704 104 HOH HOH . C 3 HOH A 105 705 105 HOH HOH . C 3 HOH A 106 706 106 HOH HOH . C 3 HOH A 107 707 107 HOH HOH . C 3 HOH A 108 708 108 HOH HOH . C 3 HOH A 109 709 109 HOH HOH . C 3 HOH A 110 710 110 HOH HOH . C 3 HOH A 111 711 189 HOH HOH . C 3 HOH A 112 712 190 HOH HOH . C 3 HOH A 113 713 191 HOH HOH . C 3 HOH A 114 714 192 HOH HOH . C 3 HOH A 115 715 193 HOH HOH . C 3 HOH A 116 716 194 HOH HOH . C 3 HOH A 117 717 195 HOH HOH . C 3 HOH A 118 718 196 HOH HOH . C 3 HOH A 119 719 111 HOH HOH . C 3 HOH A 120 720 112 HOH HOH . C 3 HOH A 121 721 113 HOH HOH . C 3 HOH A 122 722 114 HOH HOH . C 3 HOH A 123 723 115 HOH HOH . C 3 HOH A 124 724 116 HOH HOH . C 3 HOH A 125 725 117 HOH HOH . C 3 HOH A 126 726 118 HOH HOH . C 3 HOH A 127 727 119 HOH HOH . C 3 HOH A 128 728 121 HOH HOH . C 3 HOH A 129 729 122 HOH HOH . C 3 HOH A 130 730 123 HOH HOH . C 3 HOH A 131 731 124 HOH HOH . C 3 HOH A 132 732 125 HOH HOH . C 3 HOH A 133 733 126 HOH HOH . C 3 HOH A 134 734 127 HOH HOH . C 3 HOH A 135 735 128 HOH HOH . C 3 HOH A 136 736 130 HOH HOH . C 3 HOH A 137 737 131 HOH HOH . C 3 HOH A 138 738 133 HOH HOH . C 3 HOH A 139 739 134 HOH HOH . C 3 HOH A 140 740 135 HOH HOH . C 3 HOH A 141 741 136 HOH HOH . C 3 HOH A 142 742 137 HOH HOH . C 3 HOH A 143 743 138 HOH HOH . C 3 HOH A 144 744 139 HOH HOH . C 3 HOH A 145 745 140 HOH HOH . C 3 HOH A 146 746 141 HOH HOH . C 3 HOH A 147 747 142 HOH HOH . C 3 HOH A 148 748 143 HOH HOH . C 3 HOH A 149 749 145 HOH HOH . C 3 HOH A 150 750 146 HOH HOH . C 3 HOH A 151 751 147 HOH HOH . C 3 HOH A 152 752 148 HOH HOH . C 3 HOH A 153 753 149 HOH HOH . C 3 HOH A 154 754 150 HOH HOH . C 3 HOH A 155 755 151 HOH HOH . C 3 HOH A 156 756 152 HOH HOH . C 3 HOH A 157 757 153 HOH HOH . C 3 HOH A 158 758 154 HOH HOH . C 3 HOH A 159 759 155 HOH HOH . C 3 HOH A 160 760 156 HOH HOH . C 3 HOH A 161 761 157 HOH HOH . C 3 HOH A 162 762 158 HOH HOH . C 3 HOH A 163 763 159 HOH HOH . C 3 HOH A 164 764 160 HOH HOH . C 3 HOH A 165 765 161 HOH HOH . C 3 HOH A 166 766 162 HOH HOH . C 3 HOH A 167 767 163 HOH HOH . C 3 HOH A 168 768 164 HOH HOH . C 3 HOH A 169 769 165 HOH HOH . C 3 HOH A 170 770 166 HOH HOH . C 3 HOH A 171 771 167 HOH HOH . C 3 HOH A 172 772 168 HOH HOH . C 3 HOH A 173 773 169 HOH HOH . C 3 HOH A 174 774 170 HOH HOH . C 3 HOH A 175 775 171 HOH HOH . C 3 HOH A 176 776 172 HOH HOH . C 3 HOH A 177 777 173 HOH HOH . C 3 HOH A 178 778 174 HOH HOH . C 3 HOH A 179 779 175 HOH HOH . C 3 HOH A 180 780 176 HOH HOH . C 3 HOH A 181 781 177 HOH HOH . C 3 HOH A 182 782 178 HOH HOH . C 3 HOH A 183 783 179 HOH HOH . C 3 HOH A 184 784 180 HOH HOH . C 3 HOH A 185 785 181 HOH HOH . C 3 HOH A 186 786 182 HOH HOH . C 3 HOH A 187 787 183 HOH HOH . C 3 HOH A 188 788 184 HOH HOH . C 3 HOH A 189 789 185 HOH HOH . C 3 HOH A 190 790 186 HOH HOH . C 3 HOH A 191 791 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 6DS . . . B 2 13.477 19.263 33.734 1 16.12 ? C1 6DS 501 A 1 HETATM 2 O O1 6DS . . . B 2 15.244 16.206 35.451 1 19.05 ? O1 6DS 501 A 1 HETATM 3 C C2 6DS . . . B 2 12.33 19.798 34.331 1 14.69 ? C2 6DS 501 A 1 HETATM 4 O O2 6DS . . . B 2 13.433 12.427 36.599 1 26.37 ? O2 6DS 501 A 1 HETATM 5 C C3 6DS . . . B 2 12.078 21.162 34.144 1 14.65 ? C3 6DS 501 A 1 HETATM 6 C C4 6DS . . . B 2 12.974 21.991 33.408 1 14.5 ? C4 6DS 501 A 1 HETATM 7 C C5 6DS . . . B 2 14.131 21.418 32.848 1 14.49 ? C5 6DS 501 A 1 HETATM 8 C C6 6DS . . . B 2 14.385 20.073 33.012 1 15.56 ? C6 6DS 501 A 1 HETATM 9 C C7 6DS . . . B 2 7.164 25.042 34.027 1 20.59 ? C7 6DS 501 A 1 HETATM 10 C C8 6DS . . . B 2 4.138 23.594 34.811 1 23.23 ? C8 6DS 501 A 1 HETATM 11 C C9 6DS . . . B 2 9.169 26.651 35.243 1 19.06 ? C9 6DS 501 A 1 HETATM 12 C C10 6DS . . . B 2 12.762 23.553 33.304 1 14.51 ? C10 6DS 501 A 1 HETATM 13 C C11 6DS . . . B 2 11.246 23.962 33.471 1 15.82 ? C11 6DS 501 A 1 HETATM 14 C C12 6DS . . . B 2 13.351 24.284 32.053 1 14.16 ? C12 6DS 501 A 1 HETATM 15 C C13 6DS . . . B 2 13.665 24.073 34.514 1 12.9 ? C13 6DS 501 A 1 HETATM 16 C C14 6DS . . . B 2 13.191 23.645 35.967 1 12.84 ? C14 6DS 501 A 1 HETATM 17 C C16 6DS . . . B 2 13.478 13.61 35.939 1 26.22 ? C16 6DS 501 A 1 HETATM 18 C C17 6DS . . . B 2 13.683 13.62 34.449 1 24.19 ? C17 6DS 501 A 1 HETATM 19 C C20 6DS . . . B 2 12.8 23.743 30.722 1 14.74 ? C20 6DS 501 A 1 HETATM 20 C C26 6DS . . . B 2 10.898 25.099 34.233 1 17.08 ? C26 6DS 501 A 1 HETATM 21 C C27 6DS . . . B 2 9.551 25.442 34.413 1 18.57 ? C27 6DS 501 A 1 HETATM 22 C C28 6DS . . . B 2 8.556 24.651 33.807 1 18.64 ? C28 6DS 501 A 1 HETATM 23 C C29 6DS . . . B 2 8.904 23.587 32.997 1 17.44 ? C29 6DS 501 A 1 HETATM 24 C C30 6DS . . . B 2 10.234 23.226 32.813 1 16.49 ? C30 6DS 501 A 1 HETATM 25 C C34 6DS . . . B 2 11.327 18.921 35.081 1 13.46 ? C34 6DS 501 A 1 HETATM 26 C C43 6DS . . . B 2 6.127 24.374 33.539 1 21.09 ? C43 6DS 501 A 1 HETATM 27 C C44 6DS . . . B 2 4.717 24.727 33.896 1 21.59 ? C44 6DS 501 A 1 HETATM 28 O O47 6DS . . . B 2 4.48 25.866 34.675 1 19.79 ? O47 6DS 501 A 1 HETATM 29 C C48 6DS . . . B 2 3.917 24.814 32.587 1 22.91 ? C48 6DS 501 A 1 HETATM 30 O O62 6DS . . . B 2 13.858 17.895 33.83 1 18.19 ? O62 6DS 501 A 1 HETATM 31 C C63 6DS . . . B 2 15.026 17.141 33.402 1 19.4 ? C63 6DS 501 A 1 HETATM 32 C C64 6DS . . . B 2 15.015 15.753 34.202 1 20.69 ? C64 6DS 501 A 1 HETATM 33 C C67 6DS . . . B 2 13.868 15.027 33.944 1 21.99 ? C67 6DS 501 A 1 HETATM 34 O O71 6DS . . . B 2 13.254 14.762 36.614 1 27.97 ? O71 6DS 501 A 1 HETATM 35 F F2 6DS . . . B 2 4.852 23.512 35.993 1 23.19 ? F2 6DS 501 A 1 HETATM 36 F F1 6DS . . . B 2 4.168 22.368 34.188 1 22.55 ? F1 6DS 501 A 1 HETATM 37 F F3 6DS . . . B 2 2.822 23.922 35.123 1 25.07 ? F3 6DS 501 A 1 HETATM 38 F F6 6DS . . . B 2 4.057 23.615 31.931 1 23.28 ? F6 6DS 501 A 1 HETATM 39 F F5 6DS . . . B 2 4.445 25.881 31.916 1 23.82 ? F5 6DS 501 A 1 HETATM 40 F F4 6DS . . . B 2 2.598 25.023 32.826 1 23.2 ? F4 6DS 501 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 40 #