data_3W0L # _model_server_result.job_id BLjVJtvBisoMQhsGQBsiAg _model_server_result.datetime_utc '2025-08-31 12:18:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w0l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":701}' # _entry.id 3W0L # _exptl.entry_id 3W0L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FRUCTOSE -6-PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W0L _cell.length_a 109.318 _cell.length_b 130.03 _cell.length_c 175.117 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W0L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,M,N 1 1 C,D,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O MET 231 A MET 231 1_555 F NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc2 A O VAL 234 A VAL 234 1_555 F NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc3 A O VAL 237 A VAL 237 1_555 F NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc4 A O GLY 239 A GLY 239 1_555 F NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc5 C O MET 231 C MET 231 1_555 K NA NA . C NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc6 C O VAL 234 C VAL 234 1_555 K NA NA . C NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc7 C O VAL 237 C VAL 237 1_555 K NA NA . C NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc8 C O GLY 239 C GLY 239 1_555 K NA NA . C NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc9 K NA NA . C NA 502 1_555 O O HOH . C HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id F6R _chem_comp.mon_nstd_flag . _chem_comp.name 'FRUCTOSE -6-PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 F6R sing 83 n n C1 O1 F6R sing 84 n n C1 H1C1 F6R sing 85 n n C1 H1C2 F6R sing 86 n n C2 C3 F6R sing 87 n n C2 O2 F6R doub 88 n n C3 C4 F6R sing 89 n n C3 O3 F6R sing 90 n n C3 H3 F6R sing 91 n n C4 C5 F6R sing 92 n n C4 O4 F6R sing 93 n n C4 H4 F6R sing 94 n n C5 C6 F6R sing 95 n n C5 O5 F6R sing 96 n n C5 H5 F6R sing 97 n n C6 O6 F6R sing 98 n n C6 H6C1 F6R sing 99 n n C6 H6C2 F6R sing 100 n n O1 H1 F6R sing 101 n n O3 HA F6R sing 102 n n O4 HB F6R sing 103 n n O5 HC F6R sing 104 n n O6 P F6R sing 105 n n P O1P F6R sing 106 n n P O2P F6R sing 107 n n P O3P F6R doub 108 n n HO1 O1P F6R sing 109 n n HO2 O2P F6R sing 110 n n # _atom_sites.entry_id 3W0L _atom_sites.fract_transf_matrix[1][1] 0.009148 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00571 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 501 500 SO4 SO4 . F 4 NA A 1 502 502 NA NA . G 5 F6R B 1 701 1 F6R F6R . H 3 SO4 B 1 702 1 SO4 SO4 . I 3 SO4 B 1 703 2 SO4 SO4 . J 3 SO4 C 1 501 500 SO4 SO4 . K 4 NA C 1 502 502 NA NA . L 5 F6R D 1 701 1 F6R F6R . M 6 HOH A 1 601 6 HOH HOH . M 6 HOH A 2 602 7 HOH HOH . M 6 HOH A 3 603 8 HOH HOH . M 6 HOH A 4 604 9 HOH HOH . M 6 HOH A 5 605 10 HOH HOH . M 6 HOH A 6 606 11 HOH HOH . M 6 HOH A 7 607 12 HOH HOH . M 6 HOH A 8 608 13 HOH HOH . M 6 HOH A 9 609 14 HOH HOH . M 6 HOH A 10 610 33 HOH HOH . M 6 HOH A 11 611 34 HOH HOH . M 6 HOH A 12 612 35 HOH HOH . M 6 HOH A 13 613 36 HOH HOH . M 6 HOH A 14 614 40 HOH HOH . M 6 HOH A 15 615 41 HOH HOH . M 6 HOH A 16 616 43 HOH HOH . M 6 HOH A 17 617 47 HOH HOH . M 6 HOH A 18 618 48 HOH HOH . M 6 HOH A 19 619 49 HOH HOH . M 6 HOH A 20 620 52 HOH HOH . M 6 HOH A 21 621 53 HOH HOH . M 6 HOH A 22 622 56 HOH HOH . M 6 HOH A 23 623 57 HOH HOH . M 6 HOH A 24 624 62 HOH HOH . M 6 HOH A 25 625 67 HOH HOH . M 6 HOH A 26 626 68 HOH HOH . M 6 HOH A 27 627 71 HOH HOH . M 6 HOH A 28 628 73 HOH HOH . M 6 HOH A 29 629 76 HOH HOH . M 6 HOH A 30 630 79 HOH HOH . M 6 HOH A 31 631 80 HOH HOH . M 6 HOH A 32 632 85 HOH HOH . N 6 HOH B 1 801 1 HOH HOH . N 6 HOH B 2 802 2 HOH HOH . N 6 HOH B 3 803 3 HOH HOH . N 6 HOH B 4 804 4 HOH HOH . N 6 HOH B 5 805 5 HOH HOH . N 6 HOH B 6 806 15 HOH HOH . N 6 HOH B 7 807 16 HOH HOH . N 6 HOH B 8 808 23 HOH HOH . N 6 HOH B 9 809 30 HOH HOH . N 6 HOH B 10 810 37 HOH HOH . N 6 HOH B 11 811 38 HOH HOH . N 6 HOH B 12 812 39 HOH HOH . N 6 HOH B 13 813 50 HOH HOH . N 6 HOH B 14 814 51 HOH HOH . N 6 HOH B 15 815 54 HOH HOH . N 6 HOH B 16 816 55 HOH HOH . N 6 HOH B 17 817 59 HOH HOH . N 6 HOH B 18 818 61 HOH HOH . N 6 HOH B 19 819 64 HOH HOH . N 6 HOH B 20 820 66 HOH HOH . N 6 HOH B 21 821 69 HOH HOH . N 6 HOH B 22 822 72 HOH HOH . N 6 HOH B 23 823 77 HOH HOH . N 6 HOH B 24 824 78 HOH HOH . N 6 HOH B 25 825 81 HOH HOH . N 6 HOH B 26 826 84 HOH HOH . O 6 HOH C 1 601 17 HOH HOH . O 6 HOH C 2 602 18 HOH HOH . O 6 HOH C 3 603 19 HOH HOH . O 6 HOH C 4 604 20 HOH HOH . O 6 HOH C 5 605 21 HOH HOH . O 6 HOH C 6 606 22 HOH HOH . O 6 HOH C 7 607 24 HOH HOH . O 6 HOH C 8 608 31 HOH HOH . O 6 HOH C 9 609 42 HOH HOH . O 6 HOH C 10 610 44 HOH HOH . O 6 HOH C 11 611 60 HOH HOH . O 6 HOH C 12 612 65 HOH HOH . O 6 HOH C 13 613 74 HOH HOH . O 6 HOH C 14 614 75 HOH HOH . O 6 HOH C 15 615 82 HOH HOH . P 6 HOH D 1 801 25 HOH HOH . P 6 HOH D 2 802 26 HOH HOH . P 6 HOH D 3 803 27 HOH HOH . P 6 HOH D 4 804 28 HOH HOH . P 6 HOH D 5 805 29 HOH HOH . P 6 HOH D 6 806 32 HOH HOH . P 6 HOH D 7 807 45 HOH HOH . P 6 HOH D 8 808 46 HOH HOH . P 6 HOH D 9 809 58 HOH HOH . P 6 HOH D 10 810 63 HOH HOH . P 6 HOH D 11 811 70 HOH HOH . P 6 HOH D 12 812 83 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 F6R . . . G 5 -5.647 28.81 17.935 1 69.92 ? C1 F6R 701 B 1 HETATM 2 C C2 F6R . . . G 5 -5.745 27.955 16.723 1 66.72 ? C2 F6R 701 B 1 HETATM 3 C C3 F6R . . . G 5 -7.03 27.759 15.993 1 70.34 ? C3 F6R 701 B 1 HETATM 4 C C4 F6R . . . G 5 -7.442 26.328 16.158 1 68.31 ? C4 F6R 701 B 1 HETATM 5 C C5 F6R . . . G 5 -8.944 26.203 16.022 1 58.87 ? C5 F6R 701 B 1 HETATM 6 C C6 F6R . . . G 5 -9.306 24.768 16.011 1 59.98 ? C6 F6R 701 B 1 HETATM 7 O O1 F6R . . . G 5 -4.336 28.928 18.312 1 62.97 ? O1 F6R 701 B 1 HETATM 8 O O2 F6R . . . G 5 -4.767 27.369 16.327 1 72.68 ? O2 F6R 701 B 1 HETATM 9 O O3 F6R . . . G 5 -6.769 27.949 14.648 1 70.52 ? O3 F6R 701 B 1 HETATM 10 O O4 F6R . . . G 5 -6.769 25.611 15.181 1 59.87 ? O4 F6R 701 B 1 HETATM 11 O O5 F6R . . . G 5 -9.596 26.818 17.066 1 70.89 ? O5 F6R 701 B 1 HETATM 12 O O6 F6R . . . G 5 -10.54 24.665 16.639 1 70.62 ? O6 F6R 701 B 1 HETATM 13 P P F6R . . . G 5 -10.692 23.767 17.905 1 68.79 ? P F6R 701 B 1 HETATM 14 O O1P F6R . . . G 5 -9.766 22.595 17.772 1 36.34 -1 O1P F6R 701 B 1 HETATM 15 O O2P F6R . . . G 5 -10.337 24.54 19.143 1 62.38 -1 O2P F6R 701 B 1 HETATM 16 O O3P F6R . . . G 5 -12.128 23.309 17.986 1 36.04 ? O3P F6R 701 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 401 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #