data_3W18 # _model_server_result.job_id xN9HskVBXz99au4BjOS6qw _model_server_result.datetime_utc '2024-11-05 04:22:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w18 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 3W18 # _exptl.entry_id 3W18 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 451.455 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{3-[3-(1H-benzimidazol-2-yl)-1H-indazol-6-yl]-1H-pyrazol-5-yl}-N-(3-fluorophenyl)acetamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W18 _cell.length_a 75.94 _cell.length_b 85.86 _cell.length_c 85.29 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W18 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C25 H18 F N7 O' _chem_comp.formula_weight 451.455 _chem_comp.id N13 _chem_comp.mon_nstd_flag . _chem_comp.name 2-{3-[3-(1H-benzimidazol-2-yl)-1H-indazol-6-yl]-1H-pyrazol-5-yl}-N-(3-fluorophenyl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OB CA N13 doub 237 n n C32 C33 N13 doub 238 n y C32 C31 N13 sing 239 n y C33 C28 N13 sing 240 n y C31 C30 N13 doub 241 n y CA C26 N13 sing 242 n n CA NB N13 sing 243 n n C28 NB N13 sing 244 n n C28 C29 N13 doub 245 n y C26 C21 N13 sing 246 n n C30 C29 N13 sing 247 n y C30 FA N13 sing 248 n n C21 C25 N13 doub 249 n y C21 N22 N13 sing 250 n y C25 C24 N13 sing 251 n y N22 N23 N13 sing 252 n y N23 C24 N13 doub 253 n y C24 C16 N13 sing 254 n n C16 C15 N13 doub 255 n y C16 C17 N13 sing 256 n y C15 C14 N13 sing 257 n y C17 C19 N13 doub 258 n y C14 C18 N13 doub 259 n y C19 C18 N13 sing 260 n y C19 N11 N13 sing 261 n y C18 C13 N13 sing 262 n y N11 N12 N13 sing 263 n y C13 N12 N13 doub 264 n y C13 C02 N13 sing 265 n n N01 C02 N13 doub 266 n y N01 C09 N13 sing 267 n y C02 N03 N13 sing 268 n y C09 C07 N13 doub 269 n y C09 C08 N13 sing 270 n y C07 C06 N13 sing 271 n y N03 C08 N13 sing 272 n y C08 C04 N13 doub 273 n y C06 C05 N13 doub 274 n y C04 C05 N13 sing 275 n y C29 H1 N13 sing 276 n n C31 H2 N13 sing 277 n n C32 H3 N13 sing 278 n n C33 H4 N13 sing 279 n n NB H5 N13 sing 280 n n C26 H6 N13 sing 281 n n C26 H7 N13 sing 282 n n C25 H8 N13 sing 283 n n N22 H9 N13 sing 284 n n C17 H10 N13 sing 285 n n C15 H11 N13 sing 286 n n C14 H12 N13 sing 287 n n N11 H13 N13 sing 288 n n N03 H14 N13 sing 289 n n C04 H15 N13 sing 290 n n C05 H16 N13 sing 291 n n C06 H17 N13 sing 292 n n C07 H18 N13 sing 293 n n # _atom_sites.entry_id 3W18 _atom_sites.fract_transf_matrix[1][1] 0.013168 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011725 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 N13 A 1 501 1 N13 MOD . D 2 N13 B 1 501 1 N13 MOD . E 3 HOH A 1 601 10 HOH HOH . E 3 HOH A 2 602 18 HOH HOH . E 3 HOH A 3 603 19 HOH HOH . E 3 HOH A 4 604 22 HOH HOH . E 3 HOH A 5 605 24 HOH HOH . E 3 HOH A 6 606 27 HOH HOH . E 3 HOH A 7 607 29 HOH HOH . E 3 HOH A 8 608 30 HOH HOH . E 3 HOH A 9 609 31 HOH HOH . E 3 HOH A 10 610 35 HOH HOH . E 3 HOH A 11 611 46 HOH HOH . E 3 HOH A 12 612 49 HOH HOH . E 3 HOH A 13 613 51 HOH HOH . E 3 HOH A 14 614 53 HOH HOH . E 3 HOH A 15 615 54 HOH HOH . E 3 HOH A 16 616 57 HOH HOH . E 3 HOH A 17 617 61 HOH HOH . E 3 HOH A 18 618 70 HOH HOH . E 3 HOH A 19 619 76 HOH HOH . E 3 HOH A 20 620 83 HOH HOH . E 3 HOH A 21 621 84 HOH HOH . E 3 HOH A 22 622 85 HOH HOH . E 3 HOH A 23 623 87 HOH HOH . E 3 HOH A 24 624 89 HOH HOH . E 3 HOH A 25 625 91 HOH HOH . E 3 HOH A 26 626 104 HOH HOH . E 3 HOH A 27 627 108 HOH HOH . E 3 HOH A 28 628 111 HOH HOH . E 3 HOH A 29 629 116 HOH HOH . E 3 HOH A 30 630 117 HOH HOH . E 3 HOH A 31 631 118 HOH HOH . E 3 HOH A 32 632 130 HOH HOH . E 3 HOH A 33 633 132 HOH HOH . E 3 HOH A 34 634 143 HOH HOH . E 3 HOH A 35 635 151 HOH HOH . E 3 HOH A 36 636 155 HOH HOH . E 3 HOH A 37 637 163 HOH HOH . E 3 HOH A 38 638 166 HOH HOH . F 3 HOH B 1 601 5 HOH HOH . F 3 HOH B 2 602 6 HOH HOH . F 3 HOH B 3 603 11 HOH HOH . F 3 HOH B 4 604 13 HOH HOH . F 3 HOH B 5 605 14 HOH HOH . F 3 HOH B 6 606 16 HOH HOH . F 3 HOH B 7 607 25 HOH HOH . F 3 HOH B 8 608 26 HOH HOH . F 3 HOH B 9 609 28 HOH HOH . F 3 HOH B 10 610 32 HOH HOH . F 3 HOH B 11 611 34 HOH HOH . F 3 HOH B 12 612 41 HOH HOH . F 3 HOH B 13 613 42 HOH HOH . F 3 HOH B 14 614 43 HOH HOH . F 3 HOH B 15 615 47 HOH HOH . F 3 HOH B 16 616 48 HOH HOH . F 3 HOH B 17 617 50 HOH HOH . F 3 HOH B 18 618 56 HOH HOH . F 3 HOH B 19 619 60 HOH HOH . F 3 HOH B 20 620 63 HOH HOH . F 3 HOH B 21 621 71 HOH HOH . F 3 HOH B 22 622 75 HOH HOH . F 3 HOH B 23 623 77 HOH HOH . F 3 HOH B 24 624 78 HOH HOH . F 3 HOH B 25 625 80 HOH HOH . F 3 HOH B 26 626 82 HOH HOH . F 3 HOH B 27 627 92 HOH HOH . F 3 HOH B 28 628 94 HOH HOH . F 3 HOH B 29 629 96 HOH HOH . F 3 HOH B 30 630 101 HOH HOH . F 3 HOH B 31 631 105 HOH HOH . F 3 HOH B 32 632 129 HOH HOH . F 3 HOH B 33 633 131 HOH HOH . F 3 HOH B 34 634 135 HOH HOH . F 3 HOH B 35 635 138 HOH HOH . F 3 HOH B 36 636 139 HOH HOH . F 3 HOH B 37 637 140 HOH HOH . F 3 HOH B 38 638 141 HOH HOH . F 3 HOH B 39 639 142 HOH HOH . F 3 HOH B 40 640 145 HOH HOH . F 3 HOH B 41 641 152 HOH HOH . F 3 HOH B 42 642 158 HOH HOH . F 3 HOH B 43 643 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA N13 . . . C 2 8.353 -1.203 9.328 1 43.9 ? CA N13 501 A 1 HETATM 2 C C29 N13 . . . C 2 11.493 -0.99 10.887 1 47.01 ? C29 N13 501 A 1 HETATM 3 C C30 N13 . . . C 2 12.853 -0.968 10.627 1 49.36 ? C30 N13 501 A 1 HETATM 4 F FA N13 . . . C 2 13.764 -1.029 11.798 1 50.56 ? FA N13 501 A 1 HETATM 5 C C31 N13 . . . C 2 13.313 -0.885 9.298 1 49.08 ? C31 N13 501 A 1 HETATM 6 C C32 N13 . . . C 2 12.403 -0.815 8.239 1 49.51 ? C32 N13 501 A 1 HETATM 7 C C33 N13 . . . C 2 11.026 -0.836 8.513 1 47.58 ? C33 N13 501 A 1 HETATM 8 C C28 N13 . . . C 2 10.579 -0.931 9.84 1 45.47 ? C28 N13 501 A 1 HETATM 9 N NB N13 . . . C 2 9.309 -0.993 10.217 1 43.79 ? NB N13 501 A 1 HETATM 10 O OB N13 . . . C 2 8.571 -1.286 8.12 1 46.42 ? OB N13 501 A 1 HETATM 11 C C26 N13 . . . C 2 6.928 -1.378 9.939 1 42.57 ? C26 N13 501 A 1 HETATM 12 C C21 N13 . . . C 2 7.085 -2.356 11.094 1 38.65 ? C21 N13 501 A 1 HETATM 13 C C25 N13 . . . C 2 6.215 -3.201 11.67 1 35.31 ? C25 N13 501 A 1 HETATM 14 N N22 N13 . . . C 2 8.259 -2.428 11.672 1 34.76 ? N22 N13 501 A 1 HETATM 15 N N23 N13 . . . C 2 8.218 -3.173 12.482 1 35.77 ? N23 N13 501 A 1 HETATM 16 C C24 N13 . . . C 2 7.023 -3.789 12.572 1 32.51 ? C24 N13 501 A 1 HETATM 17 C C16 N13 . . . C 2 6.791 -4.702 13.555 1 26.46 ? C16 N13 501 A 1 HETATM 18 C C17 N13 . . . C 2 7.84 -5.339 14.227 1 25.05 ? C17 N13 501 A 1 HETATM 19 C C15 N13 . . . C 2 5.525 -5.005 14.016 1 24.28 ? C15 N13 501 A 1 HETATM 20 C C14 N13 . . . C 2 5.335 -5.873 15.086 1 23.9 ? C14 N13 501 A 1 HETATM 21 C C18 N13 . . . C 2 6.375 -6.436 15.704 1 24.03 ? C18 N13 501 A 1 HETATM 22 C C19 N13 . . . C 2 7.624 -6.179 15.273 1 24.38 ? C19 N13 501 A 1 HETATM 23 N N11 N13 . . . C 2 8.475 -6.859 16.065 1 22.92 ? N11 N13 501 A 1 HETATM 24 N N12 N13 . . . C 2 7.757 -7.56 16.96 1 26.19 ? N12 N13 501 A 1 HETATM 25 C C13 N13 . . . C 2 6.462 -7.324 16.711 1 23.91 ? C13 N13 501 A 1 HETATM 26 C C02 N13 . . . C 2 5.436 -7.795 17.433 1 22.64 ? C02 N13 501 A 1 HETATM 27 N N03 N13 . . . C 2 5.495 -8.531 18.571 1 24.3 ? N03 N13 501 A 1 HETATM 28 C C08 N13 . . . C 2 4.226 -8.705 19.003 1 20.38 ? C08 N13 501 A 1 HETATM 29 C C04 N13 . . . C 2 3.724 -9.368 20.038 1 20.82 ? C04 N13 501 A 1 HETATM 30 C C05 N13 . . . C 2 2.34 -9.368 20.308 1 21.02 ? C05 N13 501 A 1 HETATM 31 C C06 N13 . . . C 2 1.474 -8.698 19.424 1 20.24 ? C06 N13 501 A 1 HETATM 32 C C07 N13 . . . C 2 2.06 -8.037 18.326 1 18.76 ? C07 N13 501 A 1 HETATM 33 C C09 N13 . . . C 2 3.401 -8.04 18.163 1 21.32 ? C09 N13 501 A 1 HETATM 34 N N01 N13 . . . C 2 4.169 -7.46 17.205 1 22.37 ? N01 N13 501 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 34 #