data_3W2D # _model_server_result.job_id XQIx9Br8wNvlE3Lx2sXONQ _model_server_result.datetime_utc '2025-09-09 02:23:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w2d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 3W2D # _exptl.entry_id 3W2D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.08 _cell.angle_gamma 90 _cell.entry_id 3W2D _cell.length_a 40.561 _cell.length_b 109.308 _cell.length_c 86.222 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W2D _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 93 A CYS 120 1_555 A SG CYS 113 A CYS 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 B SG CYS 23 L CYS 45 1_555 B SG CYS 89 L CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf3 B SG CYS 135 L CYS 157 1_555 B SG CYS 195 L CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 C SG CYS 22 H CYS 40 1_555 C SG CYS 96 H CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf5 C SG CYS 148 H CYS 166 1_555 C SG CYS 203 H CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3W2D _atom_sites.fract_transf_matrix[1][1] 0.024654 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002626 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011664 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 H 1 301 1 SO4 SO4 . E 5 HOH A 1 301 1 HOH HOH . E 5 HOH A 2 302 2 HOH HOH . E 5 HOH A 3 303 4 HOH HOH . E 5 HOH A 4 304 5 HOH HOH . E 5 HOH A 5 305 7 HOH HOH . E 5 HOH A 6 306 10 HOH HOH . E 5 HOH A 7 307 14 HOH HOH . E 5 HOH A 8 308 15 HOH HOH . E 5 HOH A 9 309 22 HOH HOH . E 5 HOH A 10 310 28 HOH HOH . E 5 HOH A 11 311 30 HOH HOH . E 5 HOH A 12 312 34 HOH HOH . E 5 HOH A 13 313 40 HOH HOH . E 5 HOH A 14 314 42 HOH HOH . E 5 HOH A 15 315 43 HOH HOH . E 5 HOH A 16 316 45 HOH HOH . E 5 HOH A 17 317 53 HOH HOH . E 5 HOH A 18 318 56 HOH HOH . E 5 HOH A 19 319 59 HOH HOH . E 5 HOH A 20 320 60 HOH HOH . E 5 HOH A 21 321 62 HOH HOH . E 5 HOH A 22 322 71 HOH HOH . E 5 HOH A 23 323 86 HOH HOH . E 5 HOH A 24 324 88 HOH HOH . E 5 HOH A 25 325 89 HOH HOH . E 5 HOH A 26 326 93 HOH HOH . E 5 HOH A 27 327 95 HOH HOH . E 5 HOH A 28 328 96 HOH HOH . E 5 HOH A 29 329 99 HOH HOH . E 5 HOH A 30 330 109 HOH HOH . E 5 HOH A 31 331 111 HOH HOH . E 5 HOH A 32 332 112 HOH HOH . E 5 HOH A 33 333 117 HOH HOH . E 5 HOH A 34 334 119 HOH HOH . E 5 HOH A 35 335 125 HOH HOH . E 5 HOH A 36 336 126 HOH HOH . E 5 HOH A 37 337 127 HOH HOH . E 5 HOH A 38 338 130 HOH HOH . E 5 HOH A 39 339 131 HOH HOH . E 5 HOH A 40 340 135 HOH HOH . F 5 HOH L 1 301 8 HOH HOH . F 5 HOH L 2 302 9 HOH HOH . F 5 HOH L 3 303 12 HOH HOH . F 5 HOH L 4 304 19 HOH HOH . F 5 HOH L 5 305 23 HOH HOH . F 5 HOH L 6 306 24 HOH HOH . F 5 HOH L 7 307 25 HOH HOH . F 5 HOH L 8 308 26 HOH HOH . F 5 HOH L 9 309 27 HOH HOH . F 5 HOH L 10 310 29 HOH HOH . F 5 HOH L 11 311 32 HOH HOH . F 5 HOH L 12 312 33 HOH HOH . F 5 HOH L 13 313 35 HOH HOH . F 5 HOH L 14 314 36 HOH HOH . F 5 HOH L 15 315 37 HOH HOH . F 5 HOH L 16 316 41 HOH HOH . F 5 HOH L 17 317 48 HOH HOH . F 5 HOH L 18 318 51 HOH HOH . F 5 HOH L 19 319 52 HOH HOH . F 5 HOH L 20 320 57 HOH HOH . F 5 HOH L 21 321 58 HOH HOH . F 5 HOH L 22 322 64 HOH HOH . F 5 HOH L 23 323 67 HOH HOH . F 5 HOH L 24 324 68 HOH HOH . F 5 HOH L 25 325 69 HOH HOH . F 5 HOH L 26 326 72 HOH HOH . F 5 HOH L 27 327 74 HOH HOH . F 5 HOH L 28 328 75 HOH HOH . F 5 HOH L 29 329 77 HOH HOH . F 5 HOH L 30 330 78 HOH HOH . F 5 HOH L 31 331 79 HOH HOH . F 5 HOH L 32 332 82 HOH HOH . F 5 HOH L 33 333 85 HOH HOH . F 5 HOH L 34 334 94 HOH HOH . F 5 HOH L 35 335 97 HOH HOH . F 5 HOH L 36 336 100 HOH HOH . F 5 HOH L 37 337 102 HOH HOH . F 5 HOH L 38 338 103 HOH HOH . F 5 HOH L 39 339 104 HOH HOH . F 5 HOH L 40 340 105 HOH HOH . F 5 HOH L 41 341 113 HOH HOH . F 5 HOH L 42 342 116 HOH HOH . F 5 HOH L 43 343 121 HOH HOH . F 5 HOH L 44 344 122 HOH HOH . F 5 HOH L 45 345 123 HOH HOH . F 5 HOH L 46 346 124 HOH HOH . F 5 HOH L 47 347 128 HOH HOH . G 5 HOH H 1 401 115 HOH HOH . G 5 HOH H 2 402 3 HOH HOH . G 5 HOH H 3 403 6 HOH HOH . G 5 HOH H 4 404 11 HOH HOH . G 5 HOH H 5 405 13 HOH HOH . G 5 HOH H 6 406 16 HOH HOH . G 5 HOH H 7 407 17 HOH HOH . G 5 HOH H 8 408 18 HOH HOH . G 5 HOH H 9 409 20 HOH HOH . G 5 HOH H 10 410 21 HOH HOH . G 5 HOH H 11 411 31 HOH HOH . G 5 HOH H 12 412 38 HOH HOH . G 5 HOH H 13 413 39 HOH HOH . G 5 HOH H 14 414 44 HOH HOH . G 5 HOH H 15 415 46 HOH HOH . G 5 HOH H 16 416 47 HOH HOH . G 5 HOH H 17 417 49 HOH HOH . G 5 HOH H 18 418 50 HOH HOH . G 5 HOH H 19 419 54 HOH HOH . G 5 HOH H 20 420 55 HOH HOH . G 5 HOH H 21 421 61 HOH HOH . G 5 HOH H 22 422 63 HOH HOH . G 5 HOH H 23 423 65 HOH HOH . G 5 HOH H 24 424 66 HOH HOH . G 5 HOH H 25 425 70 HOH HOH . G 5 HOH H 26 426 73 HOH HOH . G 5 HOH H 27 427 76 HOH HOH . G 5 HOH H 28 428 80 HOH HOH . G 5 HOH H 29 429 81 HOH HOH . G 5 HOH H 30 430 83 HOH HOH . G 5 HOH H 31 431 84 HOH HOH . G 5 HOH H 32 432 87 HOH HOH . G 5 HOH H 33 433 90 HOH HOH . G 5 HOH H 34 434 91 HOH HOH . G 5 HOH H 35 435 92 HOH HOH . G 5 HOH H 36 436 98 HOH HOH . G 5 HOH H 37 437 101 HOH HOH . G 5 HOH H 38 438 106 HOH HOH . G 5 HOH H 39 439 107 HOH HOH . G 5 HOH H 40 440 108 HOH HOH . G 5 HOH H 41 441 110 HOH HOH . G 5 HOH H 42 442 114 HOH HOH . G 5 HOH H 43 443 118 HOH HOH . G 5 HOH H 44 444 120 HOH HOH . G 5 HOH H 45 445 129 HOH HOH . G 5 HOH H 46 446 132 HOH HOH . G 5 HOH H 47 447 133 HOH HOH . G 5 HOH H 48 448 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 -0.241 64.463 -28.526 1 44.58 ? S SO4 301 H 1 HETATM 2 O O1 SO4 . . . D 4 1.03 63.702 -28.456 1 30.79 ? O1 SO4 301 H 1 HETATM 3 O O2 SO4 . . . D 4 -0.74 64.46 -29.906 1 38.1 ? O2 SO4 301 H 1 HETATM 4 O O3 SO4 . . . D 4 -1.277 63.871 -27.67 1 31.64 ? O3 SO4 301 H 1 HETATM 5 O O4 SO4 . . . D 4 -0.035 65.835 -28.074 1 36.48 ? O4 SO4 301 H 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #