data_3W2O # _model_server_result.job_id HZtgwB3CvFZbwN5OqYKljw _model_server_result.datetime_utc '2024-11-22 11:14:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w2o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 3W2O # _exptl.entry_id 3W2O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 547.957 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)-5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-3-hydroxy-3-methylbutanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W2O _cell.length_a 143.953 _cell.length_b 143.953 _cell.length_c 143.953 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W2O _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H25 Cl F3 N5 O3' _chem_comp.formula_weight 547.957 _chem_comp.id 03P _chem_comp.mon_nstd_flag . _chem_comp.name N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)-5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-3-hydroxy-3-methylbutanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms TAK-285 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C 03P doub 1 n y N1 C1 03P sing 2 n y C8 N3 03P sing 3 n n N3 C7 03P sing 4 n n N3 HN3 03P sing 5 n n N2 C4 03P sing 6 n y C5 C4 03P doub 7 n y C4 H4 03P sing 8 n n C2 C5 03P sing 9 n y C5 H5 03P sing 10 n n C7 C6 03P sing 11 n n C6 N2 03P sing 12 n n C6 H6 03P sing 13 n n C6 H6A 03P sing 14 n n C7 H7 03P sing 15 n n C7 H7A 03P sing 16 n n O C8 03P doub 17 n n C9 C8 03P sing 18 n n C11 C10 03P doub 19 n y C15 C10 03P sing 20 n y C10 N4 03P sing 21 n n O1 C13 03P sing 22 n n C13 C12 03P doub 23 n y C13 C14 03P sing 24 n y C14 C15 03P doub 25 n y C15 H15 03P sing 26 n n C18 C17 03P doub 27 n y C17 C16 03P sing 28 n y C17 H17 03P sing 29 n n C19 C20 03P doub 30 n y C20 C22 03P sing 31 n n C20 C21 03P sing 32 n y C16 C21 03P doub 33 n y C21 H21 03P sing 34 n n F C22 03P sing 35 n n C22 F2 03P sing 36 n n C22 F1 03P sing 37 n n C23 C24 03P sing 38 n n C24 H24 03P sing 39 n n C24 H24A 03P sing 40 n n C24 H24B 03P sing 41 n n C18 C19 03P sing 42 n y C19 H19 03P sing 43 n n C18 H18 03P sing 44 n n C16 O1 03P sing 45 n n CL C12 03P sing 46 n n C12 C11 03P sing 47 n y C11 H11 03P sing 48 n n C14 H14 03P sing 49 n n N4 C1 03P sing 50 n n N4 HN4 03P sing 51 n n C1 C3 03P doub 52 n y C N 03P sing 53 n y C H 03P sing 54 n n C3 C2 03P sing 55 n y C3 N2 03P sing 56 n y N C2 03P doub 57 n y C23 C9 03P sing 58 n n C9 H9 03P sing 59 n n C9 H9A 03P sing 60 n n C25 C23 03P sing 61 n n C23 O2 03P sing 62 n n O2 HO2 03P sing 63 n n C25 H25 03P sing 64 n n C25 H25A 03P sing 65 n n C25 H25B 03P sing 66 n n # _atom_sites.entry_id 3W2O _atom_sites.fract_transf_matrix[1][1] 0.006947 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 03P A 1 1101 1023 03P 03P . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 03P . . . B 2 -52.151 2.122 -22.87 1 51.29 ? N1 03P 1101 A 1 HETATM 2 N N3 03P . . . B 2 -47.866 -1.165 -21.841 1 84.17 ? N3 03P 1101 A 1 HETATM 3 C C4 03P . . . B 2 -50.569 1.185 -18.786 1 54.12 ? C4 03P 1101 A 1 HETATM 4 C C5 03P . . . B 2 -51.778 1.847 -18.81 1 51.57 ? C5 03P 1101 A 1 HETATM 5 C C6 03P . . . B 2 -48.772 0.236 -20.068 1 63.39 ? C6 03P 1101 A 1 HETATM 6 C C7 03P . . . B 2 -47.983 0.195 -21.357 1 75.97 ? C7 03P 1101 A 1 HETATM 7 C C8 03P . . . B 2 -47.142 -1.408 -22.926 1 93.02 ? C8 03P 1101 A 1 HETATM 8 C C10 03P . . . B 2 -50.024 1.366 -24.558 1 49.73 ? C10 03P 1101 A 1 HETATM 9 C C13 03P . . . B 2 -49.861 1.951 -27.333 1 55.14 ? C13 03P 1101 A 1 HETATM 10 C C15 03P . . . B 2 -49.787 0.351 -25.489 1 48.7 ? C15 03P 1101 A 1 HETATM 11 C C17 03P . . . B 2 -50.456 1.093 -30.678 1 61.61 ? C17 03P 1101 A 1 HETATM 12 C C20 03P . . . B 2 -47.942 -0.142 -30.792 1 70.01 ? C20 03P 1101 A 1 HETATM 13 C C21 03P . . . B 2 -48.245 0.763 -29.77 1 66.23 ? C21 03P 1101 A 1 HETATM 14 C C22 03P . . . B 2 -46.573 -0.795 -30.841 1 77.15 ? C22 03P 1101 A 1 HETATM 15 C C24 03P . . . B 2 -44.523 -0.308 -22.432 1 103.39 ? C24 03P 1101 A 1 HETATM 16 F F2 03P . . . B 2 -46.125 -1.068 -29.615 1 83.38 ? F2 03P 1101 A 1 HETATM 17 F F 03P . . . B 2 -46.617 -1.915 -31.558 1 79.47 ? F 03P 1101 A 1 HETATM 18 F F1 03P . . . B 2 -45.722 0.038 -31.42 1 75.71 ? F1 03P 1101 A 1 HETATM 19 C C19 03P . . . B 2 -48.908 -0.412 -31.768 1 66.86 ? C19 03P 1101 A 1 HETATM 20 C C18 03P . . . B 2 -50.161 0.201 -31.711 1 65.28 ? C18 03P 1101 A 1 HETATM 21 C C16 03P . . . B 2 -49.502 1.381 -29.699 1 62.76 ? C16 03P 1101 A 1 HETATM 22 O O1 03P . . . B 2 -49.791 2.28 -28.682 1 56.83 ? O1 03P 1101 A 1 HETATM 23 C C12 03P . . . B 2 -50.108 2.971 -26.414 1 52.35 ? C12 03P 1101 A 1 HETATM 24 CL CL 03P . . . B 2 -50.316 4.652 -27.038 1 51.53 ? CL 03P 1101 A 1 HETATM 25 C C11 03P . . . B 2 -50.176 2.682 -25.04 1 49.41 ? C11 03P 1101 A 1 HETATM 26 C C14 03P . . . B 2 -49.706 0.633 -26.859 1 52.13 ? C14 03P 1101 A 1 HETATM 27 N N4 03P . . . B 2 -50.101 1.038 -23.218 1 48.98 ? N4 03P 1101 A 1 HETATM 28 C C1 03P . . . B 2 -51.032 1.518 -22.355 1 49.83 ? C1 03P 1101 A 1 HETATM 29 C C 03P . . . B 2 -53.14 2.633 -22.108 1 49.69 ? C 03P 1101 A 1 HETATM 30 C C3 03P . . . B 2 -50.947 1.442 -20.952 1 51.99 ? C3 03P 1101 A 1 HETATM 31 C C2 03P . . . B 2 -51.975 1.983 -20.21 1 49.94 ? C2 03P 1101 A 1 HETATM 32 N N 03P . . . B 2 -53.058 2.573 -20.768 1 48.23 ? N 03P 1101 A 1 HETATM 33 N N2 03P . . . B 2 -50.063 0.945 -20.026 1 56.78 ? N2 03P 1101 A 1 HETATM 34 O O 03P . . . B 2 -47.362 -0.871 -24.002 1 96.29 ? O 03P 1101 A 1 HETATM 35 C C9 03P . . . B 2 -45.991 -2.374 -22.761 1 99.41 ? C9 03P 1101 A 1 HETATM 36 C C23 03P . . . B 2 -44.65 -1.696 -23.055 1 104.26 ? C23 03P 1101 A 1 HETATM 37 O O2 03P . . . B 2 -43.616 -2.495 -22.478 1 111.88 ? O2 03P 1101 A 1 HETATM 38 C C25 03P . . . B 2 -44.417 -1.626 -24.563 1 106.98 ? C25 03P 1101 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 38 #