data_3W2R # _model_server_result.job_id UwpQ-XJEsRRdpJTGEic6Zg _model_server_result.datetime_utc '2024-11-16 10:59:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w2r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 3W2R # _exptl.entry_id 3W2R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 565.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-{3-[2-chloro-4-({5-[2-(2-hydroxyethoxy)ethyl]-5H-pyrrolo[3,2-d]pyrimidin-4-yl}amino)phenoxy]phenyl}-3-cyclohexylurea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W2R _cell.length_a 61.161 _cell.length_b 61.161 _cell.length_c 169.719 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W2R _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H33 Cl N6 O4' _chem_comp.formula_weight 565.063 _chem_comp.id W2R _chem_comp.mon_nstd_flag . _chem_comp.name 1-{3-[2-chloro-4-({5-[2-(2-hydroxyethoxy)ethyl]-5H-pyrrolo[3,2-d]pyrimidin-4-yl}amino)phenoxy]phenyl}-3-cyclohexylurea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 C20 W2R sing 385 n n C22 C24 W2R sing 386 n n C20 C21 W2R sing 387 n n C24 C25 W2R sing 388 n n C21 C23 W2R sing 389 n n C25 C23 W2R sing 390 n n C25 N35 W2R sing 391 n n O36 C19 W2R doub 392 n n N35 C19 W2R sing 393 n n C19 N34 W2R sing 394 n n CL1 C17 W2R sing 395 n n N34 C13 W2R sing 396 n n C7 C13 W2R doub 397 n y C7 C15 W2R sing 398 n y O38 C15 W2R sing 399 n n O38 C16 W2R sing 400 n n C13 C2 W2R sing 401 n y C17 C16 W2R doub 402 n y C17 C8 W2R sing 403 n y C15 C4 W2R doub 404 n y C16 C5 W2R sing 405 n y C8 C14 W2R doub 406 n y C2 C1 W2R doub 407 n y C4 C1 W2R sing 408 n y C5 C3 W2R doub 409 n y C14 C3 W2R sing 410 n y C14 N33 W2R sing 411 n n N33 C18 W2R sing 412 n n N31 C18 W2R doub 413 n y N31 C10 W2R sing 414 n y C18 C12 W2R sing 415 n y C10 N30 W2R doub 416 n y C12 N32 W2R sing 417 n y C12 C11 W2R doub 418 n y O37 C28 W2R sing 419 n n C26 N32 W2R sing 420 n n C26 C27 W2R sing 421 n n N30 C11 W2R sing 422 n y N32 C9 W2R sing 423 n y C11 C6 W2R sing 424 n y C28 C29 W2R sing 425 n n C9 C6 W2R doub 426 n y O39 C27 W2R sing 427 n n O39 C29 W2R sing 428 n n C1 H1 W2R sing 429 n n C2 H2 W2R sing 430 n n C3 H3 W2R sing 431 n n C4 H4 W2R sing 432 n n C5 H5 W2R sing 433 n n C6 H6 W2R sing 434 n n C7 H7 W2R sing 435 n n C8 H8 W2R sing 436 n n C9 H9 W2R sing 437 n n C10 H10 W2R sing 438 n n C20 H11 W2R sing 439 n n C20 H12 W2R sing 440 n n C21 H13 W2R sing 441 n n C21 H14 W2R sing 442 n n C22 H15 W2R sing 443 n n C22 H16 W2R sing 444 n n C23 H17 W2R sing 445 n n C23 H18 W2R sing 446 n n C24 H19 W2R sing 447 n n C24 H20 W2R sing 448 n n C25 H21 W2R sing 449 n n C26 H22 W2R sing 450 n n C26 H23 W2R sing 451 n n C27 H24 W2R sing 452 n n C27 H25 W2R sing 453 n n C28 H26 W2R sing 454 n n C28 H27 W2R sing 455 n n C29 H28 W2R sing 456 n n C29 H29 W2R sing 457 n n N33 H30 W2R sing 458 n n N34 H31 W2R sing 459 n n N35 H32 W2R sing 460 n n O37 H33 W2R sing 461 n n # _atom_sites.entry_id 3W2R _atom_sites.fract_transf_matrix[1][1] 0.01635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 W2R A 1 1101 1023 W2R LIG . C 3 EDO A 1 1102 1024 EDO EDO . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . D 4 HOH A 58 2058 2058 HOH HOH . D 4 HOH A 59 2059 2059 HOH HOH . D 4 HOH A 60 2060 2060 HOH HOH . D 4 HOH A 61 2061 2061 HOH HOH . D 4 HOH A 62 2062 2062 HOH HOH . D 4 HOH A 63 2063 2063 HOH HOH . D 4 HOH A 64 2064 2064 HOH HOH . D 4 HOH A 65 2065 2065 HOH HOH . D 4 HOH A 66 2066 2066 HOH HOH . D 4 HOH A 67 2067 2067 HOH HOH . D 4 HOH A 68 2068 2068 HOH HOH . D 4 HOH A 69 2069 2069 HOH HOH . D 4 HOH A 70 2070 2070 HOH HOH . D 4 HOH A 71 2071 2071 HOH HOH . D 4 HOH A 72 2072 2072 HOH HOH . D 4 HOH A 73 2073 2073 HOH HOH . D 4 HOH A 74 2074 2074 HOH HOH . D 4 HOH A 75 2075 2075 HOH HOH . D 4 HOH A 76 2076 2076 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 W2R . . . B 2 5.456 16.116 46.494 1 34.31 ? C1 W2R 1101 A 1 HETATM 2 C C2 W2R . . . B 2 4.528 16.911 45.849 1 33.18 ? C2 W2R 1101 A 1 HETATM 3 C C3 W2R . . . B 2 4.675 10.799 46.895 1 29.24 ? C3 W2R 1101 A 1 HETATM 4 C C4 W2R . . . B 2 5.716 14.861 45.97 1 37.17 ? C4 W2R 1101 A 1 HETATM 5 C C5 W2R . . . B 2 4.545 11.918 46.106 1 37.22 ? C5 W2R 1101 A 1 HETATM 6 C C6 W2R . . . B 2 8.13 5.295 49.671 1 32.13 ? C6 W2R 1101 A 1 HETATM 7 C C7 W2R . . . B 2 4.127 15.231 44.194 1 32.15 ? C7 W2R 1101 A 1 HETATM 8 C C8 W2R . . . B 2 6.517 10.06 45.568 1 29.79 ? C8 W2R 1101 A 1 HETATM 9 C C9 W2R . . . B 2 6.78 5.015 49.624 1 41.33 ? C9 W2R 1101 A 1 HETATM 10 C C10 W2R . . . B 2 9.305 8.334 48.157 1 41.51 ? C10 W2R 1101 A 1 HETATM 11 C C11 W2R . . . B 2 8.342 6.528 49.009 1 35.79 ? C11 W2R 1101 A 1 HETATM 12 C C12 W2R . . . B 2 7.115 6.999 48.574 1 33.53 ? C12 W2R 1101 A 1 HETATM 13 C C13 W2R . . . B 2 3.862 16.474 44.719 1 37.72 ? C13 W2R 1101 A 1 HETATM 14 C C14 W2R . . . B 2 5.663 9.87 46.641 1 32.95 ? C14 W2R 1101 A 1 HETATM 15 C C15 W2R . . . B 2 5.056 14.437 44.83 1 35.48 ? C15 W2R 1101 A 1 HETATM 16 C C16 W2R . . . B 2 5.408 12.103 45.046 1 40.37 ? C16 W2R 1101 A 1 HETATM 17 C C17 W2R . . . B 2 6.393 11.181 44.767 1 35.21 ? C17 W2R 1101 A 1 HETATM 18 C C18 W2R . . . B 2 7.029 8.188 47.88 1 32.25 ? C18 W2R 1101 A 1 HETATM 19 C C19 W2R . . . B 2 2.195 17.161 42.961 1 30.96 ? C19 W2R 1101 A 1 HETATM 20 C C20 W2R . . . B 2 -0.706 19.667 39.214 1 39.04 ? C20 W2R 1101 A 1 HETATM 21 C C21 W2R . . . B 2 -1.418 19.369 40.506 1 46.77 ? C21 W2R 1101 A 1 HETATM 22 C C22 W2R . . . B 2 0.458 18.695 39.002 1 44.43 ? C22 W2R 1101 A 1 HETATM 23 C C23 W2R . . . B 2 -0.418 19.427 41.645 1 45.16 ? C23 W2R 1101 A 1 HETATM 24 C C24 W2R . . . B 2 1.426 18.747 40.168 1 38.44 ? C24 W2R 1101 A 1 HETATM 25 C C25 W2R . . . B 2 0.677 18.401 41.438 1 37.39 ? C25 W2R 1101 A 1 HETATM 26 C C26 W2R . . . B 2 4.755 6.05 48.701 1 41.42 ? C26 W2R 1101 A 1 HETATM 27 C C27 W2R . . . B 2 3.941 6.606 49.833 1 30.77 ? C27 W2R 1101 A 1 HETATM 28 C C28 W2R . . . B 2 2.301 9.613 49.566 1 49.98 ? C28 W2R 1101 A 1 HETATM 29 C C29 W2R . . . B 2 3.048 8.665 50.453 1 38.51 ? C29 W2R 1101 A 1 HETATM 30 N N30 W2R . . . B 2 9.496 7.196 48.819 1 34.46 ? N30 W2R 1101 A 1 HETATM 31 N N31 W2R . . . B 2 8.173 8.855 47.68 1 36.63 ? N31 W2R 1101 A 1 HETATM 32 N N32 W2R . . . B 2 6.183 6.05 48.959 1 37.52 ? N32 W2R 1101 A 1 HETATM 33 N N33 W2R . . . B 2 5.789 8.704 47.422 1 31.62 ? N33 W2R 1101 A 1 HETATM 34 N N34 W2R . . . B 2 2.93 17.344 44.118 1 33.03 ? N34 W2R 1101 A 1 HETATM 35 N N35 W2R . . . B 2 1.554 18.323 42.594 1 39.07 ? N35 W2R 1101 A 1 HETATM 36 O O36 W2R . . . B 2 2.03 16.112 42.363 1 36.81 ? O36 W2R 1101 A 1 HETATM 37 O O37 W2R . . . B 2 1.542 8.819 48.681 1 53.42 ? O37 W2R 1101 A 1 HETATM 38 O O38 W2R . . . B 2 5.303 13.214 44.227 1 35.27 ? O38 W2R 1101 A 1 HETATM 39 O O39 W2R . . . B 2 4.005 8.008 49.625 1 36.76 ? O39 W2R 1101 A 1 HETATM 40 CL CL1 W2R . . . B 2 7.461 11.416 43.425 1 41.79 ? CL1 W2R 1101 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 421 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 40 #