data_3W33 # _model_server_result.job_id dSXVa9oTtonriKQE5hPdAA _model_server_result.datetime_utc '2024-12-04 06:53:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w33 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 3W33 # _exptl.entry_id 3W33 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.992 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[4-(1-benzothiophen-4-yloxy)-3-chlorophenyl]amino}-N-(2-hydroxyethyl)-8,9-dihydro-7H-pyrimido[4,5-b]azepine-6-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W33 _cell.length_a 46.878 _cell.length_b 69.175 _cell.length_c 104.424 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W33 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H22 Cl N5 O3 S' _chem_comp.formula_weight 507.992 _chem_comp.id W19 _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[4-(1-benzothiophen-4-yloxy)-3-chlorophenyl]amino}-N-(2-hydroxyethyl)-8,9-dihydro-7H-pyrimido[4,5-b]azepine-6-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C5 W19 doub 380 n y C1 C3 W19 sing 381 n y C5 C15 W19 sing 382 n y C3 C13 W19 doub 383 n y C15 S34 W19 sing 384 n y C15 C10 W19 doub 385 n y C13 C10 W19 sing 386 n y C13 O33 W19 sing 387 n n S34 C8 W19 sing 388 n y C10 C6 W19 sing 389 n y O33 C14 W19 sing 390 n n C6 C8 W19 doub 391 n y CL1 C16 W19 sing 392 n n C14 C16 W19 doub 393 n y C14 C4 W19 sing 394 n y C16 C7 W19 sing 395 n y C4 C2 W19 doub 396 n y C7 C12 W19 doub 397 n y C2 C12 W19 sing 398 n y C12 N29 W19 sing 399 n n N29 C18 W19 sing 400 n n N27 C18 W19 doub 401 n y N27 C9 W19 sing 402 n y C18 C11 W19 sing 403 n y C9 N26 W19 doub 404 n y C11 C19 W19 sing 405 n n C11 C17 W19 doub 406 n y N26 C17 W19 sing 407 n y C19 C20 W19 doub 408 n n C17 N28 W19 sing 409 n n C24 N30 W19 sing 410 n n C24 C25 W19 sing 411 n n N30 C21 W19 sing 412 n n C25 O32 W19 sing 413 n n C20 C21 W19 sing 414 n n C20 C22 W19 sing 415 n n N28 C23 W19 sing 416 n n C21 O31 W19 doub 417 n n C23 C22 W19 sing 418 n n C1 H1 W19 sing 419 n n C2 H2 W19 sing 420 n n C3 H3 W19 sing 421 n n C4 H4 W19 sing 422 n n C5 H5 W19 sing 423 n n C6 H6 W19 sing 424 n n C7 H7 W19 sing 425 n n C8 H8 W19 sing 426 n n C9 H9 W19 sing 427 n n C19 H10 W19 sing 428 n n C22 H11 W19 sing 429 n n C22 H12 W19 sing 430 n n C23 H13 W19 sing 431 n n C23 H14 W19 sing 432 n n C24 H15 W19 sing 433 n n C24 H16 W19 sing 434 n n C25 H17 W19 sing 435 n n C25 H18 W19 sing 436 n n N28 H19 W19 sing 437 n n N29 H20 W19 sing 438 n n N30 H21 W19 sing 439 n n O32 H22 W19 sing 440 n n # _atom_sites.entry_id 3W33 _atom_sites.fract_transf_matrix[1][1] 0.021332 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014456 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009576 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 W19 A 1 1101 1101 W19 LIG . C 3 SO4 A 1 1102 1102 SO4 SO4 . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . D 4 HOH A 58 2058 2058 HOH HOH . D 4 HOH A 59 2059 2059 HOH HOH . D 4 HOH A 60 2060 2060 HOH HOH . D 4 HOH A 61 2061 2061 HOH HOH . D 4 HOH A 62 2062 2062 HOH HOH . D 4 HOH A 63 2063 2063 HOH HOH . D 4 HOH A 64 2064 2064 HOH HOH . D 4 HOH A 65 2065 2065 HOH HOH . D 4 HOH A 66 2066 2066 HOH HOH . D 4 HOH A 67 2067 2067 HOH HOH . D 4 HOH A 68 2068 2068 HOH HOH . D 4 HOH A 69 2069 2069 HOH HOH . D 4 HOH A 70 2070 2070 HOH HOH . D 4 HOH A 71 2071 2071 HOH HOH . D 4 HOH A 72 2072 2072 HOH HOH . D 4 HOH A 73 2073 2073 HOH HOH . D 4 HOH A 74 2074 2074 HOH HOH . D 4 HOH A 75 2075 2075 HOH HOH . D 4 HOH A 76 2076 2076 HOH HOH . D 4 HOH A 77 2077 2077 HOH HOH . D 4 HOH A 78 2078 2078 HOH HOH . D 4 HOH A 79 2079 2079 HOH HOH . D 4 HOH A 80 2080 2080 HOH HOH . D 4 HOH A 81 2081 2081 HOH HOH . D 4 HOH A 82 2082 2082 HOH HOH . D 4 HOH A 83 2083 2083 HOH HOH . D 4 HOH A 84 2084 2084 HOH HOH . D 4 HOH A 85 2085 2085 HOH HOH . D 4 HOH A 86 2086 2086 HOH HOH . D 4 HOH A 87 2087 2087 HOH HOH . D 4 HOH A 88 2088 2088 HOH HOH . D 4 HOH A 89 2089 2089 HOH HOH . D 4 HOH A 90 2090 2090 HOH HOH . D 4 HOH A 91 2091 2091 HOH HOH . D 4 HOH A 92 2092 2092 HOH HOH . D 4 HOH A 93 2093 2093 HOH HOH . D 4 HOH A 94 2094 2094 HOH HOH . D 4 HOH A 95 2095 2095 HOH HOH . D 4 HOH A 96 2096 2096 HOH HOH . D 4 HOH A 97 2097 2097 HOH HOH . D 4 HOH A 98 2098 2098 HOH HOH . D 4 HOH A 99 2099 2099 HOH HOH . D 4 HOH A 100 2100 2100 HOH HOH . D 4 HOH A 101 2101 2101 HOH HOH . D 4 HOH A 102 2102 2102 HOH HOH . D 4 HOH A 103 2103 2103 HOH HOH . D 4 HOH A 104 2104 2104 HOH HOH . D 4 HOH A 105 2105 2105 HOH HOH . D 4 HOH A 106 2106 2106 HOH HOH . D 4 HOH A 107 2107 2107 HOH HOH . D 4 HOH A 108 2108 2108 HOH HOH . D 4 HOH A 109 2109 2109 HOH HOH . D 4 HOH A 110 2110 2110 HOH HOH . D 4 HOH A 111 2111 2111 HOH HOH . D 4 HOH A 112 2112 2112 HOH HOH . D 4 HOH A 113 2113 2113 HOH HOH . D 4 HOH A 114 2114 2114 HOH HOH . D 4 HOH A 115 2115 2115 HOH HOH . D 4 HOH A 116 2116 2116 HOH HOH . D 4 HOH A 117 2117 2117 HOH HOH . D 4 HOH A 118 2118 2118 HOH HOH . D 4 HOH A 119 2119 2119 HOH HOH . D 4 HOH A 120 2120 2120 HOH HOH . D 4 HOH A 121 2121 2121 HOH HOH . D 4 HOH A 122 2122 2122 HOH HOH . D 4 HOH A 123 2123 2123 HOH HOH . D 4 HOH A 124 2124 2124 HOH HOH . D 4 HOH A 125 2125 2125 HOH HOH . D 4 HOH A 126 2126 2126 HOH HOH . D 4 HOH A 127 2127 2127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 W19 . . . B 2 18.138 29.637 6.346 1 28.07 ? C1 W19 1101 A 1 HETATM 2 C C2 W19 . . . B 2 17.528 32.828 11.266 1 23.38 ? C2 W19 1101 A 1 HETATM 3 C C3 W19 . . . B 2 18.065 30.956 6.741 1 24.7 ? C3 W19 1101 A 1 HETATM 4 C C4 W19 . . . B 2 17.579 32.471 9.937 1 23.52 ? C4 W19 1101 A 1 HETATM 5 C C5 W19 . . . B 2 17.058 28.787 6.482 1 26.32 ? C5 W19 1101 A 1 HETATM 6 C C6 W19 . . . B 2 14.534 30.996 7.976 1 26.22 ? C6 W19 1101 A 1 HETATM 7 C C7 W19 . . . B 2 15.949 34.558 10.724 1 23.33 ? C7 W19 1101 A 1 HETATM 8 C C8 W19 . . . B 2 13.632 29.965 8.008 1 31.8 ? C8 W19 1101 A 1 HETATM 9 C C9 W19 . . . B 2 13.206 33.879 13.892 1 23.25 ? C9 W19 1101 A 1 HETATM 10 C C10 W19 . . . B 2 15.817 30.669 7.445 1 25.68 ? C10 W19 1101 A 1 HETATM 11 C C11 W19 . . . B 2 15.416 34.831 15.041 1 24.84 ? C11 W19 1101 A 1 HETATM 12 C C12 W19 . . . B 2 16.71 33.878 11.67 1 22.52 ? C12 W19 1101 A 1 HETATM 13 C C13 W19 . . . B 2 16.909 31.483 7.294 1 27.03 ? C13 W19 1101 A 1 HETATM 14 C C14 W19 . . . B 2 16.811 33.15 9.012 1 24.91 ? C14 W19 1101 A 1 HETATM 15 C C15 W19 . . . B 2 15.918 29.34 7.042 1 23.77 ? C15 W19 1101 A 1 HETATM 16 C C16 W19 . . . B 2 15.994 34.197 9.399 1 23.64 ? C16 W19 1101 A 1 HETATM 17 C C17 W19 . . . B 2 14.195 34.843 15.716 1 25.54 ? C17 W19 1101 A 1 HETATM 18 C C18 W19 . . . B 2 15.423 34.319 13.754 1 23.22 ? C18 W19 1101 A 1 HETATM 19 C C19 W19 . . . B 2 16.666 35.41 15.571 1 24.14 ? C19 W19 1101 A 1 HETATM 20 C C20 W19 . . . B 2 17.056 35.495 16.845 1 26.77 ? C20 W19 1101 A 1 HETATM 21 C C21 W19 . . . B 2 18.35 36.181 17.117 1 36.18 ? C21 W19 1101 A 1 HETATM 22 C C22 W19 . . . B 2 16.242 34.99 17.968 1 28.1 ? C22 W19 1101 A 1 HETATM 23 C C23 W19 . . . B 2 14.981 35.845 17.906 1 23.86 ? C23 W19 1101 A 1 HETATM 24 C C24 W19 . . . B 2 20.241 37.091 15.883 1 46.24 ? C24 W19 1101 A 1 HETATM 25 C C25 W19 . . . B 2 21.65 36.633 16.17 1 48.85 ? C25 W19 1101 A 1 HETATM 26 N N26 W19 . . . B 2 13.087 34.359 15.127 1 25.75 ? N26 W19 1101 A 1 HETATM 27 N N27 W19 . . . B 2 14.331 33.828 13.171 1 25.43 ? N27 W19 1101 A 1 HETATM 28 N N28 W19 . . . B 2 13.954 35.3 17.025 1 26.22 ? N28 W19 1101 A 1 HETATM 29 N N29 W19 . . . B 2 16.639 34.299 13 1 21.75 ? N29 W19 1101 A 1 HETATM 30 N N30 W19 . . . B 2 19.29 36.032 16.134 1 37.5 ? N30 W19 1101 A 1 HETATM 31 O O31 W19 . . . B 2 18.538 36.839 18.137 1 41.21 ? O31 W19 1101 A 1 HETATM 32 O O32 W19 . . . B 2 21.7 36.251 17.537 1 58.45 ? O32 W19 1101 A 1 HETATM 33 O O33 W19 . . . B 2 16.866 32.825 7.666 1 24.59 ? O33 W19 1101 A 1 HETATM 34 S S34 W19 . . . B 2 14.404 28.588 7.348 1 28.44 ? S34 W19 1101 A 1 HETATM 35 CL CL1 W19 . . . B 2 15.045 35.036 8.221 1 24.37 ? CL1 W19 1101 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #