data_3W4I # _model_server_result.job_id Ee-h1ETAkAlzeS4EIqri5g _model_server_result.datetime_utc '2024-11-10 02:34:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w4i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":402}' # _entry.id 3W4I # _exptl.entry_id 3W4I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 111.099 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description pyridine-2,3-diol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W4I _cell.length_a 148.696 _cell.length_b 181.529 _cell.length_c 50.612 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W4I _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H 1 1 C,D,I,J,K,L 2 1 A,B,C,D,E,F,G,H,I,J,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C5 H5 N O2' _chem_comp.formula_weight 111.099 _chem_comp.id 8LG _chem_comp.mon_nstd_flag . _chem_comp.name pyridine-2,3-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 N5 8LG doub 1 n y C8 C7 8LG sing 2 n y N5 C2 8LG sing 3 n y C7 C3 8LG doub 4 n y C2 O6 8LG sing 5 n n C2 C1 8LG doub 6 n y C3 C1 8LG sing 7 n y C1 O4 8LG sing 8 n n C7 H1 8LG sing 9 n n C8 H3 8LG sing 10 n n C3 H4 8LG sing 11 n n O4 H5 8LG sing 12 n n O6 H2 8LG sing 13 n n # _atom_sites.entry_id 3W4I _atom_sites.fract_transf_matrix[1][1] 0.006725 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005509 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019758 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 401 401 FAD FAD . F 3 8LG A 1 402 402 8LG 8LG . G 2 FAD B 1 401 401 FAD FAD . H 3 8LG B 1 402 402 8LG 8LG . I 2 FAD C 1 401 401 FAD FAD . J 3 8LG C 1 402 402 8LG 8LG . K 2 FAD D 1 401 401 FAD FAD . L 3 8LG D 1 402 402 8LG 8LG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 8LG . . . H 3 44.226 58.244 8.738 1 35.45 ? C7 8LG 402 B 1 HETATM 2 C C8 8LG . . . H 3 44.53 59.189 9.667 1 36.18 ? C8 8LG 402 B 1 HETATM 3 C C3 8LG . . . H 3 43.399 58.584 7.647 1 35.35 ? C3 8LG 402 B 1 HETATM 4 C C1 8LG . . . H 3 42.916 59.84 7.543 1 34.82 ? C1 8LG 402 B 1 HETATM 5 C C2 8LG . . . H 3 43.262 60.805 8.542 1 34.81 ? C2 8LG 402 B 1 HETATM 6 N N5 8LG . . . H 3 44.071 60.474 9.59 1 33.56 ? N5 8LG 402 B 1 HETATM 7 O O4 8LG . . . H 3 42.096 60.214 6.498 1 36.97 ? O4 8LG 402 B 1 HETATM 8 O O6 8LG . . . H 3 42.784 62.009 8.427 1 36.17 ? O6 8LG 402 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 8 #