data_3W4J
#
_model_server_result.job_id            SjCuABRXvTXjmyW_zyLSsQ 
_model_server_result.datetime_utc      '2024-12-30 16:40:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3w4j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":401}' 
#
_entry.id    3W4J 
#
_exptl.entry_id    3W4J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3W4J 
_cell.length_a            149.249 
_cell.length_b            182.325 
_cell.length_c            50.675 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3W4J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H 1 1 
C,D,I,J,K,L 2 1 
A,B,C,D,E,F,G,H,I,J,K,L 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 113 n n 
PA O2A FAD sing 114 n n 
PA O5B FAD sing 115 n n 
PA O3P FAD sing 116 n n 
O2A HOA2 FAD sing 117 n n 
O5B C5B FAD sing 118 n n 
C5B C4B FAD sing 119 n n 
C5B H51A FAD sing 120 n n 
C5B H52A FAD sing 121 n n 
C4B O4B FAD sing 122 n n 
C4B C3B FAD sing 123 n n 
C4B H4B FAD sing 124 n n 
O4B C1B FAD sing 125 n n 
C3B O3B FAD sing 126 n n 
C3B C2B FAD sing 127 n n 
C3B H3B FAD sing 128 n n 
O3B HO3A FAD sing 129 n n 
C2B O2B FAD sing 130 n n 
C2B C1B FAD sing 131 n n 
C2B H2B FAD sing 132 n n 
O2B HO2A FAD sing 133 n n 
C1B N9A FAD sing 134 n n 
C1B H1B FAD sing 135 n n 
N9A C8A FAD sing 136 n y 
N9A C4A FAD sing 137 n y 
C8A N7A FAD doub 138 n y 
C8A H8A FAD sing 139 n n 
N7A C5A FAD sing 140 n y 
C5A C6A FAD sing 141 n y 
C5A C4A FAD doub 142 n y 
C6A N6A FAD sing 143 n n 
C6A N1A FAD doub 144 n y 
N6A H61A FAD sing 145 n n 
N6A H62A FAD sing 146 n n 
N1A C2A FAD sing 147 n y 
C2A N3A FAD doub 148 n y 
C2A H2A FAD sing 149 n n 
N3A C4A FAD sing 150 n y 
N1 C2 FAD sing 151 n n 
N1 C10 FAD doub 152 n n 
C2 O2 FAD doub 153 n n 
C2 N3 FAD sing 154 n n 
N3 C4 FAD sing 155 n n 
N3 HN3 FAD sing 156 n n 
C4 O4 FAD doub 157 n n 
C4 C4X FAD sing 158 n n 
C4X N5 FAD doub 159 n n 
C4X C10 FAD sing 160 n n 
N5 C5X FAD sing 161 n n 
C5X C6 FAD doub 162 n y 
C5X C9A FAD sing 163 n y 
C6 C7 FAD sing 164 n y 
C6 H6 FAD sing 165 n n 
C7 C7M FAD sing 166 n n 
C7 C8 FAD doub 167 n y 
C7M HM71 FAD sing 168 n n 
C7M HM72 FAD sing 169 n n 
C7M HM73 FAD sing 170 n n 
C8 C8M FAD sing 171 n n 
C8 C9 FAD sing 172 n y 
C8M HM81 FAD sing 173 n n 
C8M HM82 FAD sing 174 n n 
C8M HM83 FAD sing 175 n n 
C9 C9A FAD doub 176 n y 
C9 H9 FAD sing 177 n n 
C9A N10 FAD sing 178 n n 
N10 C10 FAD sing 179 n n 
N10 C1' FAD sing 180 n n 
C1' C2' FAD sing 181 n n 
C1' "H1'1" FAD sing 182 n n 
C1' "H1'2" FAD sing 183 n n 
C2' O2' FAD sing 184 n n 
C2' C3' FAD sing 185 n n 
C2' H2' FAD sing 186 n n 
O2' HO2' FAD sing 187 n n 
C3' O3' FAD sing 188 n n 
C3' C4' FAD sing 189 n n 
C3' H3' FAD sing 190 n n 
O3' HO3' FAD sing 191 n n 
C4' O4' FAD sing 192 n n 
C4' C5' FAD sing 193 n n 
C4' H4' FAD sing 194 n n 
O4' HO4' FAD sing 195 n n 
C5' O5' FAD sing 196 n n 
C5' "H5'1" FAD sing 197 n n 
C5' "H5'2" FAD sing 198 n n 
O5' P FAD sing 199 n n 
P O1P FAD doub 200 n n 
P O2P FAD sing 201 n n 
P O3P FAD sing 202 n n 
O2P HOP2 FAD sing 203 n n 
#
_atom_sites.entry_id                     3W4J 
_atom_sites.fract_transf_matrix[1][1]    0.0067 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005485 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019734 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 401 401 FAD FAD . 
F 3 2LD A 1 402 501 2LD LIG . 
G 2 FAD B 1 401 401 FAD FAD . 
H 3 2LD B 1 402 501 2LD LIG . 
I 2 FAD C 1 401 401 FAD FAD . 
J 3 2LD C 1 402 501 2LD LIG . 
K 2 FAD D 1 401 401 FAD FAD . 
L 3 2LD D 1 402 501 2LD LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . K 2 59.894 23.495 8.561 1 43.22 ? PA FAD 401 D 1 
HETATM 2 O O1A FAD . . . K 2 59.503 24.928 8.313 1 45.95 ? O1A FAD 401 D 1 
HETATM 3 O O2A FAD . . . K 2 59.349 22.883 9.813 1 47.92 ? O2A FAD 401 D 1 
HETATM 4 O O5B FAD . . . K 2 59.68 22.451 7.356 1 44.02 ? O5B FAD 401 D 1 
HETATM 5 C C5B FAD . . . K 2 58.811 21.385 7.699 1 45.94 ? C5B FAD 401 D 1 
HETATM 6 C C4B FAD . . . K 2 57.816 21.005 6.617 1 47.78 ? C4B FAD 401 D 1 
HETATM 7 O O4B FAD . . . K 2 57.969 19.601 6.306 1 49.37 ? O4B FAD 401 D 1 
HETATM 8 C C3B FAD . . . K 2 56.391 21.172 7.099 1 46.48 ? C3B FAD 401 D 1 
HETATM 9 O O3B FAD . . . K 2 55.558 21.428 5.986 1 44.13 ? O3B FAD 401 D 1 
HETATM 10 C C2B FAD . . . K 2 55.982 19.822 7.558 1 46.72 ? C2B FAD 401 D 1 
HETATM 11 O O2B FAD . . . K 2 54.582 19.682 7.444 1 51.18 ? O2B FAD 401 D 1 
HETATM 12 C C1B FAD . . . K 2 56.675 19.007 6.509 1 48.29 ? C1B FAD 401 D 1 
HETATM 13 N N9A FAD . . . K 2 56.805 17.603 6.856 1 48.38 ? N9A FAD 401 D 1 
HETATM 14 C C8A FAD . . . K 2 57.666 16.988 7.721 1 46.05 ? C8A FAD 401 D 1 
HETATM 15 N N7A FAD . . . K 2 57.427 15.699 7.677 1 47.36 ? N7A FAD 401 D 1 
HETATM 16 C C5A FAD . . . K 2 56.414 15.478 6.764 1 48.66 ? C5A FAD 401 D 1 
HETATM 17 C C6A FAD . . . K 2 55.751 14.348 6.279 1 48.05 ? C6A FAD 401 D 1 
HETATM 18 N N6A FAD . . . K 2 56.001 13.034 6.663 1 46.62 ? N6A FAD 401 D 1 
HETATM 19 N N1A FAD . . . K 2 54.799 14.531 5.365 1 47.93 ? N1A FAD 401 D 1 
HETATM 20 C C2A FAD . . . K 2 54.538 15.772 4.95 1 48.13 ? C2A FAD 401 D 1 
HETATM 21 N N3A FAD . . . K 2 55.087 16.931 5.322 1 48.65 ? N3A FAD 401 D 1 
HETATM 22 C C4A FAD . . . K 2 56.022 16.682 6.24 1 49.2 ? C4A FAD 401 D 1 
HETATM 23 N N1 FAD . . . K 2 66.632 30.888 11.662 1 33.16 ? N1 FAD 401 D 1 
HETATM 24 C C2 FAD . . . K 2 67.298 31.972 11.139 1 33.67 ? C2 FAD 401 D 1 
HETATM 25 O O2 FAD . . . K 2 68.092 31.861 10.201 1 33.66 ? O2 FAD 401 D 1 
HETATM 26 N N3 FAD . . . K 2 67.003 33.191 11.708 1 32.92 ? N3 FAD 401 D 1 
HETATM 27 C C4 FAD . . . K 2 66.209 33.38 12.805 1 33.38 ? C4 FAD 401 D 1 
HETATM 28 O O4 FAD . . . K 2 66.025 34.498 13.301 1 34.57 ? O4 FAD 401 D 1 
HETATM 29 C C4X FAD . . . K 2 65.557 32.183 13.377 1 32.43 ? C4X FAD 401 D 1 
HETATM 30 N N5 FAD . . . K 2 64.759 32.371 14.449 1 32.06 ? N5 FAD 401 D 1 
HETATM 31 C C5X FAD . . . K 2 64.197 31.259 14.918 1 31.59 ? C5X FAD 401 D 1 
HETATM 32 C C6 FAD . . . K 2 63.407 31.322 16.043 1 32.33 ? C6 FAD 401 D 1 
HETATM 33 C C7 FAD . . . K 2 62.796 30.192 16.546 1 33 ? C7 FAD 401 D 1 
HETATM 34 C C7M FAD . . . K 2 61.919 30.24 17.744 1 32.08 ? C7M FAD 401 D 1 
HETATM 35 C C8 FAD . . . K 2 63.02 28.995 15.899 1 33.03 ? C8 FAD 401 D 1 
HETATM 36 C C8M FAD . . . K 2 62.444 27.721 16.324 1 33.3 ? C8M FAD 401 D 1 
HETATM 37 C C9 FAD . . . K 2 63.823 28.907 14.799 1 32.99 ? C9 FAD 401 D 1 
HETATM 38 C C9A FAD . . . K 2 64.399 30.034 14.299 1 31.97 ? C9A FAD 401 D 1 
HETATM 39 N N10 FAD . . . K 2 65.18 29.886 13.235 1 33.32 ? N10 FAD 401 D 1 
HETATM 40 C C10 FAD . . . K 2 65.791 30.975 12.767 1 33.02 ? C10 FAD 401 D 1 
HETATM 41 C C1' FAD . . . K 2 65.468 28.573 12.6 1 33.34 ? C1' FAD 401 D 1 
HETATM 42 C C2' FAD . . . K 2 64.584 28.198 11.412 1 37.85 ? C2' FAD 401 D 1 
HETATM 43 O O2' FAD . . . K 2 63.26 28.53 11.809 1 37.48 ? O2' FAD 401 D 1 
HETATM 44 C C3' FAD . . . K 2 64.553 26.678 10.961 1 38.24 ? C3' FAD 401 D 1 
HETATM 45 O O3' FAD . . . K 2 65.866 26.193 10.731 1 36.19 ? O3' FAD 401 D 1 
HETATM 46 C C4' FAD . . . K 2 63.866 26.42 9.61 1 37 ? C4' FAD 401 D 1 
HETATM 47 O O4' FAD . . . K 2 62.659 27.146 9.564 1 41.32 ? O4' FAD 401 D 1 
HETATM 48 C C5' FAD . . . K 2 63.539 24.979 9.285 1 38.63 ? C5' FAD 401 D 1 
HETATM 49 O O5' FAD . . . K 2 63.66 24.629 7.887 1 39.69 ? O5' FAD 401 D 1 
HETATM 50 P P FAD . . . K 2 62.558 23.543 7.409 1 46.77 ? P FAD 401 D 1 
HETATM 51 O O1P FAD . . . K 2 61.882 23.956 6.109 1 51.9 ? O1P FAD 401 D 1 
HETATM 52 O O2P FAD . . . K 2 63.084 22.146 7.658 1 52.83 ? O2P FAD 401 D 1 
HETATM 53 O O3P FAD . . . K 2 61.468 23.515 8.594 1 44.88 ? O3P FAD 401 D 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#