data_3W4K
#
_model_server_result.job_id            iishsQYEXMxI3jHisAwmoA 
_model_server_result.datetime_utc      '2024-11-06 02:01:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3w4k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":401}' 
#
_entry.id    3W4K 
#
_exptl.entry_id    3W4K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3W4K 
_cell.length_a            149.663 
_cell.length_b            182.463 
_cell.length_c            50.844 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3W4K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H 1 1 
C,D,I,J,K,L 2 1 
A,B,C,D,E,F,G,H,I,J,K,L 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 112 n n 
PA O2A FAD sing 113 n n 
PA O5B FAD sing 114 n n 
PA O3P FAD sing 115 n n 
O2A HOA2 FAD sing 116 n n 
O5B C5B FAD sing 117 n n 
C5B C4B FAD sing 118 n n 
C5B H51A FAD sing 119 n n 
C5B H52A FAD sing 120 n n 
C4B O4B FAD sing 121 n n 
C4B C3B FAD sing 122 n n 
C4B H4B FAD sing 123 n n 
O4B C1B FAD sing 124 n n 
C3B O3B FAD sing 125 n n 
C3B C2B FAD sing 126 n n 
C3B H3B FAD sing 127 n n 
O3B HO3A FAD sing 128 n n 
C2B O2B FAD sing 129 n n 
C2B C1B FAD sing 130 n n 
C2B H2B FAD sing 131 n n 
O2B HO2A FAD sing 132 n n 
C1B N9A FAD sing 133 n n 
C1B H1B FAD sing 134 n n 
N9A C8A FAD sing 135 n y 
N9A C4A FAD sing 136 n y 
C8A N7A FAD doub 137 n y 
C8A H8A FAD sing 138 n n 
N7A C5A FAD sing 139 n y 
C5A C6A FAD sing 140 n y 
C5A C4A FAD doub 141 n y 
C6A N6A FAD sing 142 n n 
C6A N1A FAD doub 143 n y 
N6A H61A FAD sing 144 n n 
N6A H62A FAD sing 145 n n 
N1A C2A FAD sing 146 n y 
C2A N3A FAD doub 147 n y 
C2A H2A FAD sing 148 n n 
N3A C4A FAD sing 149 n y 
N1 C2 FAD sing 150 n n 
N1 C10 FAD doub 151 n n 
C2 O2 FAD doub 152 n n 
C2 N3 FAD sing 153 n n 
N3 C4 FAD sing 154 n n 
N3 HN3 FAD sing 155 n n 
C4 O4 FAD doub 156 n n 
C4 C4X FAD sing 157 n n 
C4X N5 FAD doub 158 n n 
C4X C10 FAD sing 159 n n 
N5 C5X FAD sing 160 n n 
C5X C6 FAD doub 161 n y 
C5X C9A FAD sing 162 n y 
C6 C7 FAD sing 163 n y 
C6 H6 FAD sing 164 n n 
C7 C7M FAD sing 165 n n 
C7 C8 FAD doub 166 n y 
C7M HM71 FAD sing 167 n n 
C7M HM72 FAD sing 168 n n 
C7M HM73 FAD sing 169 n n 
C8 C8M FAD sing 170 n n 
C8 C9 FAD sing 171 n y 
C8M HM81 FAD sing 172 n n 
C8M HM82 FAD sing 173 n n 
C8M HM83 FAD sing 174 n n 
C9 C9A FAD doub 175 n y 
C9 H9 FAD sing 176 n n 
C9A N10 FAD sing 177 n n 
N10 C10 FAD sing 178 n n 
N10 C1' FAD sing 179 n n 
C1' C2' FAD sing 180 n n 
C1' "H1'1" FAD sing 181 n n 
C1' "H1'2" FAD sing 182 n n 
C2' O2' FAD sing 183 n n 
C2' C3' FAD sing 184 n n 
C2' H2' FAD sing 185 n n 
O2' HO2' FAD sing 186 n n 
C3' O3' FAD sing 187 n n 
C3' C4' FAD sing 188 n n 
C3' H3' FAD sing 189 n n 
O3' HO3' FAD sing 190 n n 
C4' O4' FAD sing 191 n n 
C4' C5' FAD sing 192 n n 
C4' H4' FAD sing 193 n n 
O4' HO4' FAD sing 194 n n 
C5' O5' FAD sing 195 n n 
C5' "H5'1" FAD sing 196 n n 
C5' "H5'2" FAD sing 197 n n 
O5' P FAD sing 198 n n 
P O1P FAD doub 199 n n 
P O2P FAD sing 200 n n 
P O3P FAD sing 201 n n 
O2P HOP2 FAD sing 202 n n 
#
_atom_sites.entry_id                     3W4K 
_atom_sites.fract_transf_matrix[1][1]    0.006682 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005481 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019668 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 401 401 FAD FAD . 
F 3 3LD A 1 402 501 3LD LIG . 
G 2 FAD B 1 401 401 FAD FAD . 
H 3 3LD B 1 402 501 3LD LIG . 
I 2 FAD C 1 401 401 FAD FAD . 
J 3 3LD C 1 402 501 3LD LIG . 
K 2 FAD D 1 401 401 FAD FAD . 
L 3 3LD D 1 402 501 3LD LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . I 2 58.919 77.074 16.681 1 37.2 ? PA FAD 401 C 1 
HETATM 2 O O1A FAD . . . I 2 58.631 75.669 17.141 1 32.07 ? O1A FAD 401 C 1 
HETATM 3 O O2A FAD . . . I 2 58.314 77.658 15.394 1 35.66 ? O2A FAD 401 C 1 
HETATM 4 O O5B FAD . . . I 2 58.499 78.118 17.863 1 32.63 ? O5B FAD 401 C 1 
HETATM 5 C C5B FAD . . . I 2 57.323 78.811 17.479 1 30.99 ? C5B FAD 401 C 1 
HETATM 6 C C4B FAD . . . I 2 56.475 79.382 18.596 1 34.65 ? C4B FAD 401 C 1 
HETATM 7 O O4B FAD . . . I 2 56.587 80.822 18.665 1 35.99 ? O4B FAD 401 C 1 
HETATM 8 C C3B FAD . . . I 2 55.007 79.085 18.366 1 34.39 ? C3B FAD 401 C 1 
HETATM 9 O O3B FAD . . . I 2 54.419 78.875 19.662 1 31.78 ? O3B FAD 401 C 1 
HETATM 10 C C2B FAD . . . I 2 54.553 80.384 17.718 1 37.48 ? C2B FAD 401 C 1 
HETATM 11 O O2B FAD . . . I 2 53.15 80.65 17.753 1 42 ? O2B FAD 401 C 1 
HETATM 12 C C1B FAD . . . I 2 55.256 81.349 18.623 1 36.32 ? C1B FAD 401 C 1 
HETATM 13 N N9A FAD . . . I 2 55.179 82.75 18.227 1 37 ? N9A FAD 401 C 1 
HETATM 14 C C8A FAD . . . I 2 55.88 83.428 17.252 1 35.56 ? C8A FAD 401 C 1 
HETATM 15 N N7A FAD . . . I 2 55.54 84.704 17.283 1 35.74 ? N7A FAD 401 C 1 
HETATM 16 C C5A FAD . . . I 2 54.58 84.869 18.306 1 37.8 ? C5A FAD 401 C 1 
HETATM 17 C C6A FAD . . . I 2 53.807 85.923 18.868 1 36.37 ? C6A FAD 401 C 1 
HETATM 18 N N6A FAD . . . I 2 53.817 87.246 18.439 1 34.21 ? N6A FAD 401 C 1 
HETATM 19 N N1A FAD . . . I 2 52.959 85.715 19.896 1 35.92 ? N1A FAD 401 C 1 
HETATM 20 C C2A FAD . . . I 2 52.867 84.48 20.369 1 34.57 ? C2A FAD 401 C 1 
HETATM 21 N N3A FAD . . . I 2 53.527 83.404 19.917 1 36.93 ? N3A FAD 401 C 1 
HETATM 22 C C4A FAD . . . I 2 54.367 83.638 18.894 1 37.83 ? C4A FAD 401 C 1 
HETATM 23 N N1 FAD . . . I 2 65.483 70.195 13.642 1 28.63 ? N1 FAD 401 C 1 
HETATM 24 C C2 FAD . . . I 2 66.114 69.11 14.213 1 30.19 ? C2 FAD 401 C 1 
HETATM 25 O O2 FAD . . . I 2 66.82 69.183 15.245 1 31.49 ? O2 FAD 401 C 1 
HETATM 26 N N3 FAD . . . I 2 65.937 67.88 13.618 1 28.65 ? N3 FAD 401 C 1 
HETATM 27 C C4 FAD . . . I 2 65.281 67.638 12.497 1 29.28 ? C4 FAD 401 C 1 
HETATM 28 O O4 FAD . . . I 2 65.242 66.515 12.028 1 29.35 ? O4 FAD 401 C 1 
HETATM 29 C C4X FAD . . . I 2 64.646 68.835 11.891 1 30.62 ? C4X FAD 401 C 1 
HETATM 30 N N5 FAD . . . I 2 63.979 68.576 10.761 1 29.45 ? N5 FAD 401 C 1 
HETATM 31 C C5X FAD . . . I 2 63.394 69.655 10.272 1 28.76 ? C5X FAD 401 C 1 
HETATM 32 C C6 FAD . . . I 2 62.681 69.49 9.107 1 29.6 ? C6 FAD 401 C 1 
HETATM 33 C C7 FAD . . . I 2 62.035 70.548 8.495 1 30.06 ? C7 FAD 401 C 1 
HETATM 34 C C7M FAD . . . I 2 61.303 70.166 7.254 1 28.3 ? C7M FAD 401 C 1 
HETATM 35 C C8 FAD . . . I 2 62.112 71.825 9.087 1 29.45 ? C8 FAD 401 C 1 
HETATM 36 C C8M FAD . . . I 2 61.484 73.07 8.593 1 29.66 ? C8M FAD 401 C 1 
HETATM 37 C C9 FAD . . . I 2 62.828 71.983 10.248 1 29.31 ? C9 FAD 401 C 1 
HETATM 38 C C9A FAD . . . I 2 63.465 70.914 10.854 1 28.81 ? C9A FAD 401 C 1 
HETATM 39 N N10 FAD . . . I 2 64.153 71.13 11.969 1 28.92 ? N10 FAD 401 C 1 
HETATM 40 C C10 FAD . . . I 2 64.763 70.078 12.494 1 29.37 ? C10 FAD 401 C 1 
HETATM 41 C C1' FAD . . . I 2 64.228 72.503 12.588 1 29.55 ? C1' FAD 401 C 1 
HETATM 42 C C2' FAD . . . I 2 63.269 72.846 13.808 1 28.73 ? C2' FAD 401 C 1 
HETATM 43 O O2' FAD . . . I 2 61.871 72.433 13.734 1 25.41 ? O2' FAD 401 C 1 
HETATM 44 C C3' FAD . . . I 2 63.301 74.301 14.296 1 24.45 ? C3' FAD 401 C 1 
HETATM 45 O O3' FAD . . . I 2 64.678 74.442 14.426 1 27.23 ? O3' FAD 401 C 1 
HETATM 46 C C4' FAD . . . I 2 62.887 74.465 15.776 1 23.22 ? C4' FAD 401 C 1 
HETATM 47 O O4' FAD . . . I 2 61.644 73.842 16.005 1 25.44 ? O4' FAD 401 C 1 
HETATM 48 C C5' FAD . . . I 2 62.605 75.869 16.238 1 22.6 ? C5' FAD 401 C 1 
HETATM 49 O O5' FAD . . . I 2 62.237 75.912 17.594 1 28.66 ? O5' FAD 401 C 1 
HETATM 50 P P FAD . . . I 2 61.353 77.225 18.028 1 39.3 ? P FAD 401 C 1 
HETATM 51 O O1P FAD . . . I 2 60.486 77.111 19.278 1 32.22 ? O1P FAD 401 C 1 
HETATM 52 O O2P FAD . . . I 2 62.179 78.481 17.885 1 44.29 ? O2P FAD 401 C 1 
HETATM 53 O O3P FAD . . . I 2 60.514 77.233 16.652 1 33.18 ? O3P FAD 401 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    51 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           53 
#