data_3W4K # _model_server_result.job_id bDDy_q-5faMKziaLrND5MQ _model_server_result.datetime_utc '2024-11-06 01:57:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w4k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":402}' # _entry.id 3W4K # _exptl.entry_id 3W4K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 216.236 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-hydroxy-6-(2-phenylethyl)pyridazin-4(1H)-one _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W4K _cell.length_a 149.663 _cell.length_b 182.463 _cell.length_c 50.844 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H 1 1 C,D,I,J,K,L 2 1 A,B,C,D,E,F,G,H,I,J,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C12 H12 N2 O2' _chem_comp.formula_weight 216.236 _chem_comp.id 3LD _chem_comp.mon_nstd_flag . _chem_comp.name 3-hydroxy-6-(2-phenylethyl)pyridazin-4(1H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N14 N13 3LD sing 1 n n N14 C8 3LD sing 2 n n C12 C8 3LD sing 3 n n C12 C11 3LD sing 4 n n N13 C10 3LD doub 5 n n C8 C7 3LD doub 6 n n C11 C6 3LD sing 7 n n C4 C6 3LD doub 8 n y C4 C2 3LD sing 9 n y C10 O16 3LD sing 10 n n C10 C9 3LD sing 11 n n C6 C5 3LD sing 12 n y C2 C1 3LD doub 13 n y C7 C9 3LD sing 14 n n C9 O15 3LD doub 15 n n C5 C3 3LD doub 16 n y C1 C3 3LD sing 17 n y C4 H1 3LD sing 18 n n C5 H2 3LD sing 19 n n C7 H3 3LD sing 20 n n C1 H4 3LD sing 21 n n C2 H5 3LD sing 22 n n C3 H6 3LD sing 23 n n C11 H7 3LD sing 24 n n C11 H8 3LD sing 25 n n C12 H9 3LD sing 26 n n C12 H10 3LD sing 27 n n N14 H11 3LD sing 28 n n O16 H12 3LD sing 29 n n # _atom_sites.entry_id 3W4K _atom_sites.fract_transf_matrix[1][1] 0.006682 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005481 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019668 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 401 401 FAD FAD . F 3 3LD A 1 402 501 3LD LIG . G 2 FAD B 1 401 401 FAD FAD . H 3 3LD B 1 402 501 3LD LIG . I 2 FAD C 1 401 401 FAD FAD . J 3 3LD C 1 402 501 3LD LIG . K 2 FAD D 1 401 401 FAD FAD . L 3 3LD D 1 402 501 3LD LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 3LD . . . L 3 71.554 34.636 16.359 1 45.22 ? C4 3LD 402 D 1 HETATM 2 C C5 3LD . . . L 3 70.33 34.501 18.426 1 47.26 ? C5 3LD 402 D 1 HETATM 3 C C6 3LD . . . L 3 70.421 34.867 17.104 1 44.1 ? C6 3LD 402 D 1 HETATM 4 C C7 3LD . . . L 3 67.177 33.354 17.135 1 27.43 ? C7 3LD 402 D 1 HETATM 5 C C8 3LD . . . L 3 67.863 33.445 16.002 1 30.38 ? C8 3LD 402 D 1 HETATM 6 C C10 3LD . . . L 3 67.082 30.969 16.336 1 30.52 ? C10 3LD 402 D 1 HETATM 7 C C1 3LD . . . L 3 72.499 33.649 18.362 1 46.83 ? C1 3LD 402 D 1 HETATM 8 C C2 3LD . . . L 3 72.573 34.014 17.028 1 49.19 ? C2 3LD 402 D 1 HETATM 9 C C3 3LD . . . L 3 71.362 33.892 19.09 1 47.09 ? C3 3LD 402 D 1 HETATM 10 C C9 3LD . . . L 3 66.722 31.995 17.362 1 28.84 ? C9 3LD 402 D 1 HETATM 11 C C11 3LD . . . L 3 69.242 35.529 16.49 1 42.89 ? C11 3LD 402 D 1 HETATM 12 C C12 3LD . . . L 3 68.428 34.719 15.487 1 32.83 ? C12 3LD 402 D 1 HETATM 13 N N13 3LD . . . L 3 67.737 31.128 15.264 1 28.03 ? N13 3LD 402 D 1 HETATM 14 N N14 3LD . . . L 3 68.126 32.414 15.131 1 31.7 ? N14 3LD 402 D 1 HETATM 15 O O15 3LD . . . L 3 66.043 31.64 18.312 1 27.04 ? O15 3LD 402 D 1 HETATM 16 O O16 3LD . . . L 3 66.626 29.756 16.642 1 38.97 ? O16 3LD 402 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #