data_3W5R # _model_server_result.job_id -5wyhXFPsQ0Zhx8R4MoWlQ _model_server_result.datetime_utc '2024-11-30 03:18:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w5r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 3W5R # _exptl.entry_id 3W5R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 418.609 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3beta,5beta,9beta)-3-(acetyloxy)cholan-24-oic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.25 _cell.angle_gamma 90 _cell.entry_id 3W5R _cell.length_a 154.433 _cell.length_b 42.026 _cell.length_c 41.514 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W5R _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H42 O4' _chem_comp.formula_weight 418.609 _chem_comp.id LOA _chem_comp.mon_nstd_flag . _chem_comp.name '(3beta,5beta,9beta)-3-(acetyloxy)cholan-24-oic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Lithocholic acid acetate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C10 LOA sing 194 n n C1 C10 LOA sing 195 n n C1 C2 LOA sing 196 n n C10 C5 LOA sing 197 n n C10 C9 LOA sing 198 n n C5 C6 LOA sing 199 n n C5 C4 LOA sing 200 n n C2 C3 LOA sing 201 n n C6 C7 LOA sing 202 n n O25 C26 LOA doub 203 n n C3 C4 LOA sing 204 n n C3 O3 LOA sing 205 n n C11 C9 LOA sing 206 n n C11 C12 LOA sing 207 n n C9 C8 LOA sing 208 n n C8 C7 LOA sing 209 n n C8 C14 LOA sing 210 n n C18 C13 LOA sing 211 n n C26 O3 LOA sing 212 n n C26 C25 LOA sing 213 n n C12 C13 LOA sing 214 n n C13 C14 LOA sing 215 n n C13 C17 LOA sing 216 n n C14 C15 LOA sing 217 n n C15 C16 LOA sing 218 n n C21 C20 LOA sing 219 n n C17 C20 LOA sing 220 n n C17 C16 LOA sing 221 n n C20 C22 LOA sing 222 n n C22 C23 LOA sing 223 n n C23 C24 LOA sing 224 n n C24 OT1 LOA doub 225 n n C24 OT2 LOA sing 226 n n C1 H1 LOA sing 227 n n C1 H2 LOA sing 228 n n C2 H3 LOA sing 229 n n C2 H4 LOA sing 230 n n C3 H5 LOA sing 231 n n C4 H6 LOA sing 232 n n C4 H7 LOA sing 233 n n C5 H8 LOA sing 234 n n C6 H9 LOA sing 235 n n C6 H10 LOA sing 236 n n C7 H11 LOA sing 237 n n C7 H12 LOA sing 238 n n C8 H13 LOA sing 239 n n C9 H14 LOA sing 240 n n C11 H15 LOA sing 241 n n C11 H16 LOA sing 242 n n C12 H17 LOA sing 243 n n C12 H18 LOA sing 244 n n C14 H19 LOA sing 245 n n C15 H20 LOA sing 246 n n C15 H21 LOA sing 247 n n C16 H22 LOA sing 248 n n C16 H23 LOA sing 249 n n C17 H24 LOA sing 250 n n C18 H25 LOA sing 251 n n C18 H26 LOA sing 252 n n C18 H27 LOA sing 253 n n C19 H28 LOA sing 254 n n C19 H29 LOA sing 255 n n C19 H30 LOA sing 256 n n C20 H31 LOA sing 257 n n C21 H32 LOA sing 258 n n C21 H33 LOA sing 259 n n C21 H34 LOA sing 260 n n C22 H35 LOA sing 261 n n C22 H36 LOA sing 262 n n C23 H37 LOA sing 263 n n C23 H38 LOA sing 264 n n C25 H39 LOA sing 265 n n C25 H40 LOA sing 266 n n C25 H41 LOA sing 267 n n OT2 H42 LOA sing 268 n n # _atom_sites.entry_id 3W5R _atom_sites.fract_transf_matrix[1][1] 0.006475 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000709 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023795 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024232 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 LOA A 1 500 500 LOA CHC . D 4 HOH A 1 601 1 HOH HOH . D 4 HOH A 2 602 2 HOH HOH . D 4 HOH A 3 603 3 HOH HOH . D 4 HOH A 4 604 4 HOH HOH . D 4 HOH A 5 605 5 HOH HOH . D 4 HOH A 6 606 8 HOH HOH . D 4 HOH A 7 607 9 HOH HOH . D 4 HOH A 8 608 10 HOH HOH . D 4 HOH A 9 609 11 HOH HOH . D 4 HOH A 10 610 12 HOH HOH . D 4 HOH A 11 611 13 HOH HOH . D 4 HOH A 12 612 14 HOH HOH . D 4 HOH A 13 613 15 HOH HOH . D 4 HOH A 14 614 16 HOH HOH . D 4 HOH A 15 615 17 HOH HOH . D 4 HOH A 16 616 18 HOH HOH . D 4 HOH A 17 617 19 HOH HOH . D 4 HOH A 18 618 20 HOH HOH . D 4 HOH A 19 619 21 HOH HOH . D 4 HOH A 20 620 22 HOH HOH . D 4 HOH A 21 621 23 HOH HOH . D 4 HOH A 22 622 27 HOH HOH . D 4 HOH A 23 623 28 HOH HOH . D 4 HOH A 24 624 29 HOH HOH . D 4 HOH A 25 625 30 HOH HOH . D 4 HOH A 26 626 31 HOH HOH . D 4 HOH A 27 627 32 HOH HOH . D 4 HOH A 28 628 33 HOH HOH . D 4 HOH A 29 629 34 HOH HOH . D 4 HOH A 30 630 35 HOH HOH . D 4 HOH A 31 631 36 HOH HOH . D 4 HOH A 32 632 37 HOH HOH . D 4 HOH A 33 633 38 HOH HOH . D 4 HOH A 34 634 39 HOH HOH . D 4 HOH A 35 635 40 HOH HOH . D 4 HOH A 36 636 41 HOH HOH . D 4 HOH A 37 637 42 HOH HOH . D 4 HOH A 38 638 44 HOH HOH . D 4 HOH A 39 639 45 HOH HOH . D 4 HOH A 40 640 46 HOH HOH . D 4 HOH A 41 641 47 HOH HOH . D 4 HOH A 42 642 49 HOH HOH . D 4 HOH A 43 643 50 HOH HOH . D 4 HOH A 44 644 55 HOH HOH . D 4 HOH A 45 645 58 HOH HOH . D 4 HOH A 46 646 59 HOH HOH . D 4 HOH A 47 647 64 HOH HOH . D 4 HOH A 48 648 65 HOH HOH . D 4 HOH A 49 649 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LOA . . . C 3 64.479 15.197 -8.059 1 41.65 ? C1 LOA 500 A 1 HETATM 2 C C2 LOA . . . C 3 65.433 14.685 -6.888 1 44.66 ? C2 LOA 500 A 1 HETATM 3 C C3 LOA . . . C 3 65.11 13.143 -6.49 1 45.25 ? C3 LOA 500 A 1 HETATM 4 O O3 LOA . . . C 3 65.938 12.744 -5.445 1 47.95 ? O3 LOA 500 A 1 HETATM 5 C C4 LOA . . . C 3 63.587 12.954 -6.053 1 43.76 ? C4 LOA 500 A 1 HETATM 6 C C5 LOA . . . C 3 62.611 13.417 -7.277 1 41.26 ? C5 LOA 500 A 1 HETATM 7 C C6 LOA . . . C 3 61.041 13.253 -6.855 1 40.35 ? C6 LOA 500 A 1 HETATM 8 C C7 LOA . . . C 3 60.758 14.113 -5.531 1 37.64 ? C7 LOA 500 A 1 HETATM 9 C C8 LOA . . . C 3 61.036 15.678 -5.776 1 39.13 ? C8 LOA 500 A 1 HETATM 10 C C9 LOA . . . C 3 62.598 15.901 -6.214 1 39.04 ? C9 LOA 500 A 1 HETATM 11 C C10 LOA . . . C 3 62.948 15.023 -7.626 1 40.49 ? C10 LOA 500 A 1 HETATM 12 C C11 LOA . . . C 3 62.857 17.421 -6.449 1 37.66 ? C11 LOA 500 A 1 HETATM 13 C C12 LOA . . . C 3 62.559 18.324 -5.206 1 35 ? C12 LOA 500 A 1 HETATM 14 C C13 LOA . . . C 3 61.093 18.099 -4.588 1 37.24 ? C13 LOA 500 A 1 HETATM 15 C C14 LOA . . . C 3 60.82 16.523 -4.457 1 37.84 ? C14 LOA 500 A 1 HETATM 16 C C15 LOA . . . C 3 59.36 16.495 -3.829 1 34.29 ? C15 LOA 500 A 1 HETATM 17 C C16 LOA . . . C 3 59.669 17.382 -2.66 1 33.8 ? C16 LOA 500 A 1 HETATM 18 C C17 LOA . . . C 3 60.804 18.443 -3.054 1 36.06 ? C17 LOA 500 A 1 HETATM 19 C C18 LOA . . . C 3 60.039 18.824 -5.657 1 38.02 ? C18 LOA 500 A 1 HETATM 20 C C19 LOA . . . C 3 62.159 15.562 -8.839 1 40.7 ? C19 LOA 500 A 1 HETATM 21 C C20 LOA . . . C 3 60.351 19.973 -2.691 1 37.54 ? C20 LOA 500 A 1 HETATM 22 C C21 LOA . . . C 3 61.516 21.022 -3.105 1 36.5 ? C21 LOA 500 A 1 HETATM 23 C C22 LOA . . . C 3 60.126 20.025 -1.19 1 38.87 ? C22 LOA 500 A 1 HETATM 24 C C23 LOA . . . C 3 59.678 21.352 -0.551 1 39.42 ? C23 LOA 500 A 1 HETATM 25 C C24 LOA . . . C 3 59.444 21.276 0.914 1 39.34 ? C24 LOA 500 A 1 HETATM 26 C C25 LOA . . . C 3 67.999 11.569 -4.419 1 51.74 ? C25 LOA 500 A 1 HETATM 27 C C26 LOA . . . C 3 67.027 12.051 -5.547 1 50.57 ? C26 LOA 500 A 1 HETATM 28 O OT1 LOA . . . C 3 58.451 21.871 1.343 1 40.36 ? OT1 LOA 500 A 1 HETATM 29 O OT2 LOA . . . C 3 60.219 20.619 1.652 1 42.63 ? OT2 LOA 500 A 1 HETATM 30 O O25 LOA . . . C 3 67.607 11.582 -6.512 1 56.93 ? O25 LOA 500 A 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 1397 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 30 #