data_3W5T # _model_server_result.job_id sV7UH0TKT4nQWZBdZv4Y0g _model_server_result.datetime_utc '2024-10-12 22:19:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w5t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 3W5T # _exptl.entry_id 3W5T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 432.636 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3beta,5beta,9beta)-3-(propanoyloxy)cholan-24-oic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.32 _cell.angle_gamma 90 _cell.entry_id 3W5T _cell.length_a 154.485 _cell.length_b 41.791 _cell.length_c 41.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W5T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H44 O4' _chem_comp.formula_weight 432.636 _chem_comp.id LHP _chem_comp.mon_nstd_flag . _chem_comp.name '(3beta,5beta,9beta)-3-(propanoyloxy)cholan-24-oic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Lithocholic acid propionate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C10 LHP sing 194 n n C1 C10 LHP sing 195 n n C1 C2 LHP sing 196 n n C10 C5 LHP sing 197 n n C10 C9 LHP sing 198 n n C5 C6 LHP sing 199 n n C5 C4 LHP sing 200 n n C2 C3 LHP sing 201 n n C3 C4 LHP sing 202 n n C3 O3 LHP sing 203 n n C6 C7 LHP sing 204 n n C11 C9 LHP sing 205 n n C11 C12 LHP sing 206 n n C9 C8 LHP sing 207 n n O25 C26 LHP doub 208 n n O3 C26 LHP sing 209 n n C8 C7 LHP sing 210 n n C8 C14 LHP sing 211 n n C26 C27 LHP sing 212 n n C18 C13 LHP sing 213 n n C12 C13 LHP sing 214 n n C27 C28 LHP sing 215 n n C13 C14 LHP sing 216 n n C13 C17 LHP sing 217 n n C14 C15 LHP sing 218 n n C15 C16 LHP sing 219 n n C21 C20 LHP sing 220 n n C17 C20 LHP sing 221 n n C17 C16 LHP sing 222 n n C20 C22 LHP sing 223 n n C22 C23 LHP sing 224 n n C23 C24 LHP sing 225 n n C24 OT1 LHP doub 226 n n C24 OT2 LHP sing 227 n n C1 H1 LHP sing 228 n n C1 H2 LHP sing 229 n n C2 H3 LHP sing 230 n n C2 H4 LHP sing 231 n n C3 H5 LHP sing 232 n n C4 H6 LHP sing 233 n n C4 H7 LHP sing 234 n n C5 H8 LHP sing 235 n n C6 H9 LHP sing 236 n n C6 H10 LHP sing 237 n n C7 H11 LHP sing 238 n n C7 H12 LHP sing 239 n n C8 H13 LHP sing 240 n n C9 H14 LHP sing 241 n n C11 H15 LHP sing 242 n n C11 H16 LHP sing 243 n n C12 H17 LHP sing 244 n n C12 H18 LHP sing 245 n n C14 H19 LHP sing 246 n n C15 H20 LHP sing 247 n n C15 H21 LHP sing 248 n n C16 H22 LHP sing 249 n n C16 H23 LHP sing 250 n n C17 H24 LHP sing 251 n n C18 H25 LHP sing 252 n n C18 H26 LHP sing 253 n n C18 H27 LHP sing 254 n n C19 H28 LHP sing 255 n n C19 H29 LHP sing 256 n n C19 H30 LHP sing 257 n n C20 H31 LHP sing 258 n n C21 H32 LHP sing 259 n n C21 H33 LHP sing 260 n n C21 H34 LHP sing 261 n n C22 H35 LHP sing 262 n n C22 H36 LHP sing 263 n n C23 H37 LHP sing 264 n n C23 H38 LHP sing 265 n n C27 H39 LHP sing 266 n n C27 H40 LHP sing 267 n n C28 H41 LHP sing 268 n n C28 H42 LHP sing 269 n n C28 H43 LHP sing 270 n n OT2 H44 LHP sing 271 n n # _atom_sites.entry_id 3W5T _atom_sites.fract_transf_matrix[1][1] 0.006473 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000717 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023929 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024168 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 LHP A 1 500 500 LHP LCP . D 4 HOH A 1 601 1 HOH HOH . D 4 HOH A 2 602 2 HOH HOH . D 4 HOH A 3 603 3 HOH HOH . D 4 HOH A 4 604 4 HOH HOH . D 4 HOH A 5 605 5 HOH HOH . D 4 HOH A 6 606 6 HOH HOH . D 4 HOH A 7 607 7 HOH HOH . D 4 HOH A 8 608 8 HOH HOH . D 4 HOH A 9 609 9 HOH HOH . D 4 HOH A 10 610 10 HOH HOH . D 4 HOH A 11 611 11 HOH HOH . D 4 HOH A 12 612 12 HOH HOH . D 4 HOH A 13 613 13 HOH HOH . D 4 HOH A 14 614 14 HOH HOH . D 4 HOH A 15 615 15 HOH HOH . D 4 HOH A 16 616 16 HOH HOH . D 4 HOH A 17 617 17 HOH HOH . D 4 HOH A 18 618 18 HOH HOH . D 4 HOH A 19 619 19 HOH HOH . D 4 HOH A 20 620 20 HOH HOH . D 4 HOH A 21 621 21 HOH HOH . D 4 HOH A 22 622 22 HOH HOH . D 4 HOH A 23 623 24 HOH HOH . D 4 HOH A 24 624 25 HOH HOH . D 4 HOH A 25 625 26 HOH HOH . D 4 HOH A 26 626 27 HOH HOH . D 4 HOH A 27 627 28 HOH HOH . D 4 HOH A 28 628 29 HOH HOH . D 4 HOH A 29 629 31 HOH HOH . D 4 HOH A 30 630 33 HOH HOH . D 4 HOH A 31 631 34 HOH HOH . D 4 HOH A 32 632 36 HOH HOH . D 4 HOH A 33 633 37 HOH HOH . D 4 HOH A 34 634 38 HOH HOH . D 4 HOH A 35 635 39 HOH HOH . D 4 HOH A 36 636 40 HOH HOH . D 4 HOH A 37 637 42 HOH HOH . D 4 HOH A 38 638 43 HOH HOH . D 4 HOH A 39 639 44 HOH HOH . D 4 HOH A 40 640 45 HOH HOH . D 4 HOH A 41 641 46 HOH HOH . D 4 HOH A 42 642 47 HOH HOH . D 4 HOH A 43 643 48 HOH HOH . D 4 HOH A 44 644 50 HOH HOH . D 4 HOH A 45 645 52 HOH HOH . D 4 HOH A 46 646 53 HOH HOH . D 4 HOH A 47 647 54 HOH HOH . D 4 HOH A 48 648 55 HOH HOH . D 4 HOH A 49 649 58 HOH HOH . D 4 HOH A 50 650 64 HOH HOH . D 4 HOH A 51 651 82 HOH HOH . D 4 HOH A 52 652 85 HOH HOH . E 4 HOH C 1 701 23 HOH HOH . E 4 HOH C 2 702 32 HOH HOH . E 4 HOH C 3 703 56 HOH HOH . E 4 HOH C 4 704 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 LHP . . . C 3 66.026 12.881 -5.994 1 46.67 ? O3 LHP 500 A 1 HETATM 2 C C1 LHP . . . C 3 64.238 15.21 -8.427 1 36.22 ? C1 LHP 500 A 1 HETATM 3 C C2 LHP . . . C 3 65.325 14.704 -7.394 1 38.45 ? C2 LHP 500 A 1 HETATM 4 C C3 LHP . . . C 3 65.085 13.167 -6.955 1 42.02 ? C3 LHP 500 A 1 HETATM 5 C C4 LHP . . . C 3 63.607 12.926 -6.341 1 40.45 ? C4 LHP 500 A 1 HETATM 6 C C5 LHP . . . C 3 62.492 13.393 -7.461 1 37.12 ? C5 LHP 500 A 1 HETATM 7 C C6 LHP . . . C 3 60.969 13.186 -6.865 1 38.35 ? C6 LHP 500 A 1 HETATM 8 C C7 LHP . . . C 3 60.781 14.073 -5.529 1 37.5 ? C7 LHP 500 A 1 HETATM 9 C C8 LHP . . . C 3 61.033 15.66 -5.815 1 37.16 ? C8 LHP 500 A 1 HETATM 10 C C9 LHP . . . C 3 62.546 15.896 -6.379 1 37.47 ? C9 LHP 500 A 1 HETATM 11 C C10 LHP . . . C 3 62.769 15.016 -7.832 1 37.72 ? C10 LHP 500 A 1 HETATM 12 C C11 LHP . . . C 3 62.784 17.448 -6.642 1 37.86 ? C11 LHP 500 A 1 HETATM 13 C C12 LHP . . . C 3 62.589 18.337 -5.359 1 34.37 ? C12 LHP 500 A 1 HETATM 14 C C13 LHP . . . C 3 61.137 18.1 -4.658 1 36.53 ? C13 LHP 500 A 1 HETATM 15 C C14 LHP . . . C 3 60.881 16.493 -4.515 1 35.87 ? C14 LHP 500 A 1 HETATM 16 C C15 LHP . . . C 3 59.433 16.427 -3.822 1 35.06 ? C15 LHP 500 A 1 HETATM 17 C C16 LHP . . . C 3 59.767 17.322 -2.686 1 32.98 ? C16 LHP 500 A 1 HETATM 18 C C17 LHP . . . C 3 60.883 18.408 -3.094 1 35.53 ? C17 LHP 500 A 1 HETATM 19 C C18 LHP . . . C 3 60.015 18.829 -5.673 1 33.43 ? C18 LHP 500 A 1 HETATM 20 C C19 LHP . . . C 3 61.803 15.548 -8.927 1 35.71 ? C19 LHP 500 A 1 HETATM 21 C C20 LHP . . . C 3 60.435 19.939 -2.71 1 38.56 ? C20 LHP 500 A 1 HETATM 22 C C21 LHP . . . C 3 61.618 20.982 -3.109 1 36.2 ? C21 LHP 500 A 1 HETATM 23 C C22 LHP . . . C 3 60.202 19.941 -1.222 1 38.58 ? C22 LHP 500 A 1 HETATM 24 C C23 LHP . . . C 3 59.743 21.215 -0.533 1 42.12 ? C23 LHP 500 A 1 HETATM 25 C C24 LHP . . . C 3 59.499 21.05 0.906 1 42.43 ? C24 LHP 500 A 1 HETATM 26 C C26 LHP . . . C 3 66.596 11.752 -5.749 1 50.74 ? C26 LHP 500 A 1 HETATM 27 C C27 LHP . . . C 3 67.803 11.634 -4.78 1 50.62 ? C27 LHP 500 A 1 HETATM 28 C C28 LHP . . . C 3 68.955 12.103 -3.809 1 53.94 ? C28 LHP 500 A 1 HETATM 29 O OT1 LHP . . . C 3 58.522 21.669 1.344 1 44.34 ? OT1 LHP 500 A 1 HETATM 30 O OT2 LHP . . . C 3 60.227 20.312 1.606 1 43.76 ? OT2 LHP 500 A 1 HETATM 31 O O25 LHP . . . C 3 66.454 10.582 -6.09 1 54.44 ? O25 LHP 500 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #