data_3W7N # _model_server_result.job_id 8WyY1DLDwm2BGRMRnhQlHQ _model_server_result.datetime_utc '2024-10-15 11:23:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w7n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":409}' # _entry.id 3W7N # _exptl.entry_id 3W7N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W7N _cell.length_a 67.743 _cell.length_b 72.951 _cell.length_c 129.553 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W7N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 183 n n C1 C2 GOL sing 184 n n C1 H11 GOL sing 185 n n C1 H12 GOL sing 186 n n O1 HO1 GOL sing 187 n n C2 O2 GOL sing 188 n n C2 C3 GOL sing 189 n n C2 H2 GOL sing 190 n n O2 HO2 GOL sing 191 n n C3 O3 GOL sing 192 n n C3 H31 GOL sing 193 n n C3 H32 GOL sing 194 n n O3 HO3 GOL sing 195 n n # _atom_sites.entry_id 3W7N _atom_sites.fract_transf_matrix[1][1] 0.014762 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013708 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007719 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 W7N A 1 401 1 W7N DRG . D 3 GOL A 1 402 1 GOL GOL . E 3 GOL A 1 403 2 GOL GOL . F 3 GOL A 1 404 3 GOL GOL . G 3 GOL A 1 405 4 GOL GOL . H 3 GOL A 1 406 5 GOL GOL . I 3 GOL A 1 407 6 GOL GOL . J 3 GOL A 1 408 8 GOL GOL . K 3 GOL A 1 409 9 GOL GOL . L 3 GOL A 1 410 10 GOL GOL . M 3 GOL A 1 411 12 GOL GOL . N 3 GOL A 1 412 14 GOL GOL . O 4 FMN A 1 413 1 FMN FMN . P 5 NCO A 1 414 351 NCO NCO . Q 2 W7N B 1 401 2 W7N DRG . R 4 FMN B 1 402 2 FMN FMN . S 6 HOH A 1 501 1 HOH HOH . S 6 HOH A 2 502 2 HOH HOH . S 6 HOH A 3 503 5 HOH HOH . S 6 HOH A 4 504 7 HOH HOH . S 6 HOH A 5 505 10 HOH HOH . S 6 HOH A 6 506 11 HOH HOH . S 6 HOH A 7 507 12 HOH HOH . S 6 HOH A 8 508 20 HOH HOH . S 6 HOH A 9 509 21 HOH HOH . S 6 HOH A 10 510 22 HOH HOH . S 6 HOH A 11 511 23 HOH HOH . S 6 HOH A 12 512 24 HOH HOH . S 6 HOH A 13 513 27 HOH HOH . S 6 HOH A 14 514 28 HOH HOH . S 6 HOH A 15 515 29 HOH HOH . S 6 HOH A 16 516 30 HOH HOH . S 6 HOH A 17 517 31 HOH HOH . S 6 HOH A 18 518 32 HOH HOH . S 6 HOH A 19 519 33 HOH HOH . S 6 HOH A 20 520 35 HOH HOH . S 6 HOH A 21 521 43 HOH HOH . S 6 HOH A 22 522 45 HOH HOH . S 6 HOH A 23 523 47 HOH HOH . S 6 HOH A 24 524 48 HOH HOH . S 6 HOH A 25 525 49 HOH HOH . S 6 HOH A 26 526 51 HOH HOH . S 6 HOH A 27 527 53 HOH HOH . S 6 HOH A 28 528 55 HOH HOH . S 6 HOH A 29 529 56 HOH HOH . S 6 HOH A 30 530 57 HOH HOH . S 6 HOH A 31 531 62 HOH HOH . S 6 HOH A 32 532 67 HOH HOH . S 6 HOH A 33 533 70 HOH HOH . S 6 HOH A 34 534 72 HOH HOH . S 6 HOH A 35 535 73 HOH HOH . S 6 HOH A 36 536 74 HOH HOH . S 6 HOH A 37 537 77 HOH HOH . S 6 HOH A 38 538 79 HOH HOH . S 6 HOH A 39 539 83 HOH HOH . S 6 HOH A 40 540 84 HOH HOH . S 6 HOH A 41 541 85 HOH HOH . S 6 HOH A 42 542 86 HOH HOH . S 6 HOH A 43 543 87 HOH HOH . S 6 HOH A 44 544 88 HOH HOH . S 6 HOH A 45 545 89 HOH HOH . S 6 HOH A 46 546 90 HOH HOH . S 6 HOH A 47 547 91 HOH HOH . S 6 HOH A 48 548 93 HOH HOH . S 6 HOH A 49 549 94 HOH HOH . S 6 HOH A 50 550 96 HOH HOH . S 6 HOH A 51 551 97 HOH HOH . S 6 HOH A 52 552 99 HOH HOH . S 6 HOH A 53 553 100 HOH HOH . S 6 HOH A 54 554 104 HOH HOH . S 6 HOH A 55 555 105 HOH HOH . S 6 HOH A 56 556 106 HOH HOH . S 6 HOH A 57 557 109 HOH HOH . S 6 HOH A 58 558 110 HOH HOH . S 6 HOH A 59 559 112 HOH HOH . S 6 HOH A 60 560 113 HOH HOH . S 6 HOH A 61 561 114 HOH HOH . S 6 HOH A 62 562 117 HOH HOH . S 6 HOH A 63 563 121 HOH HOH . S 6 HOH A 64 564 123 HOH HOH . S 6 HOH A 65 565 126 HOH HOH . S 6 HOH A 66 566 128 HOH HOH . S 6 HOH A 67 567 131 HOH HOH . S 6 HOH A 68 568 132 HOH HOH . S 6 HOH A 69 569 136 HOH HOH . S 6 HOH A 70 570 140 HOH HOH . S 6 HOH A 71 571 144 HOH HOH . S 6 HOH A 72 572 145 HOH HOH . S 6 HOH A 73 573 147 HOH HOH . S 6 HOH A 74 574 148 HOH HOH . S 6 HOH A 75 575 152 HOH HOH . S 6 HOH A 76 576 156 HOH HOH . S 6 HOH A 77 577 157 HOH HOH . S 6 HOH A 78 578 158 HOH HOH . S 6 HOH A 79 579 159 HOH HOH . S 6 HOH A 80 580 161 HOH HOH . S 6 HOH A 81 581 168 HOH HOH . S 6 HOH A 82 582 171 HOH HOH . S 6 HOH A 83 583 172 HOH HOH . S 6 HOH A 84 584 175 HOH HOH . S 6 HOH A 85 585 176 HOH HOH . S 6 HOH A 86 586 178 HOH HOH . S 6 HOH A 87 587 179 HOH HOH . S 6 HOH A 88 588 180 HOH HOH . S 6 HOH A 89 589 181 HOH HOH . S 6 HOH A 90 590 182 HOH HOH . S 6 HOH A 91 591 183 HOH HOH . S 6 HOH A 92 592 185 HOH HOH . S 6 HOH A 93 593 188 HOH HOH . S 6 HOH A 94 594 189 HOH HOH . S 6 HOH A 95 595 192 HOH HOH . S 6 HOH A 96 596 193 HOH HOH . S 6 HOH A 97 597 194 HOH HOH . S 6 HOH A 98 598 195 HOH HOH . S 6 HOH A 99 599 201 HOH HOH . T 6 HOH B 1 501 3 HOH HOH . T 6 HOH B 2 502 4 HOH HOH . T 6 HOH B 3 503 6 HOH HOH . T 6 HOH B 4 504 8 HOH HOH . T 6 HOH B 5 505 9 HOH HOH . T 6 HOH B 6 506 13 HOH HOH . T 6 HOH B 7 507 14 HOH HOH . T 6 HOH B 8 508 15 HOH HOH . T 6 HOH B 9 509 16 HOH HOH . T 6 HOH B 10 510 17 HOH HOH . T 6 HOH B 11 511 18 HOH HOH . T 6 HOH B 12 512 19 HOH HOH . T 6 HOH B 13 513 25 HOH HOH . T 6 HOH B 14 514 26 HOH HOH . T 6 HOH B 15 515 34 HOH HOH . T 6 HOH B 16 516 36 HOH HOH . T 6 HOH B 17 517 37 HOH HOH . T 6 HOH B 18 518 38 HOH HOH . T 6 HOH B 19 519 39 HOH HOH . T 6 HOH B 20 520 40 HOH HOH . T 6 HOH B 21 521 41 HOH HOH . T 6 HOH B 22 522 42 HOH HOH . T 6 HOH B 23 523 44 HOH HOH . T 6 HOH B 24 524 46 HOH HOH . T 6 HOH B 25 525 50 HOH HOH . T 6 HOH B 26 526 52 HOH HOH . T 6 HOH B 27 527 54 HOH HOH . T 6 HOH B 28 528 58 HOH HOH . T 6 HOH B 29 529 59 HOH HOH . T 6 HOH B 30 530 60 HOH HOH . T 6 HOH B 31 531 61 HOH HOH . T 6 HOH B 32 532 63 HOH HOH . T 6 HOH B 33 533 64 HOH HOH . T 6 HOH B 34 534 65 HOH HOH . T 6 HOH B 35 535 66 HOH HOH . T 6 HOH B 36 536 68 HOH HOH . T 6 HOH B 37 537 69 HOH HOH . T 6 HOH B 38 538 71 HOH HOH . T 6 HOH B 39 539 75 HOH HOH . T 6 HOH B 40 540 76 HOH HOH . T 6 HOH B 41 541 78 HOH HOH . T 6 HOH B 42 542 80 HOH HOH . T 6 HOH B 43 543 81 HOH HOH . T 6 HOH B 44 544 82 HOH HOH . T 6 HOH B 45 545 92 HOH HOH . T 6 HOH B 46 546 95 HOH HOH . T 6 HOH B 47 547 98 HOH HOH . T 6 HOH B 48 548 101 HOH HOH . T 6 HOH B 49 549 102 HOH HOH . T 6 HOH B 50 550 103 HOH HOH . T 6 HOH B 51 551 107 HOH HOH . T 6 HOH B 52 552 108 HOH HOH . T 6 HOH B 53 553 111 HOH HOH . T 6 HOH B 54 554 115 HOH HOH . T 6 HOH B 55 555 116 HOH HOH . T 6 HOH B 56 556 118 HOH HOH . T 6 HOH B 57 557 119 HOH HOH . T 6 HOH B 58 558 120 HOH HOH . T 6 HOH B 59 559 122 HOH HOH . T 6 HOH B 60 560 124 HOH HOH . T 6 HOH B 61 561 125 HOH HOH . T 6 HOH B 62 562 127 HOH HOH . T 6 HOH B 63 563 129 HOH HOH . T 6 HOH B 64 564 130 HOH HOH . T 6 HOH B 65 565 133 HOH HOH . T 6 HOH B 66 566 134 HOH HOH . T 6 HOH B 67 567 135 HOH HOH . T 6 HOH B 68 568 137 HOH HOH . T 6 HOH B 69 569 138 HOH HOH . T 6 HOH B 70 570 139 HOH HOH . T 6 HOH B 71 571 141 HOH HOH . T 6 HOH B 72 572 142 HOH HOH . T 6 HOH B 73 573 143 HOH HOH . T 6 HOH B 74 574 146 HOH HOH . T 6 HOH B 75 575 149 HOH HOH . T 6 HOH B 76 576 150 HOH HOH . T 6 HOH B 77 577 151 HOH HOH . T 6 HOH B 78 578 153 HOH HOH . T 6 HOH B 79 579 154 HOH HOH . T 6 HOH B 80 580 155 HOH HOH . T 6 HOH B 81 581 160 HOH HOH . T 6 HOH B 82 582 162 HOH HOH . T 6 HOH B 83 583 163 HOH HOH . T 6 HOH B 84 584 164 HOH HOH . T 6 HOH B 85 585 165 HOH HOH . T 6 HOH B 86 586 166 HOH HOH . T 6 HOH B 87 587 167 HOH HOH . T 6 HOH B 88 588 169 HOH HOH . T 6 HOH B 89 589 170 HOH HOH . T 6 HOH B 90 590 173 HOH HOH . T 6 HOH B 91 591 174 HOH HOH . T 6 HOH B 92 592 177 HOH HOH . T 6 HOH B 93 593 184 HOH HOH . T 6 HOH B 94 594 186 HOH HOH . T 6 HOH B 95 595 187 HOH HOH . T 6 HOH B 96 596 190 HOH HOH . T 6 HOH B 97 597 191 HOH HOH . T 6 HOH B 98 598 196 HOH HOH . T 6 HOH B 99 599 197 HOH HOH . T 6 HOH B 100 600 198 HOH HOH . T 6 HOH B 101 601 199 HOH HOH . T 6 HOH B 102 602 200 HOH HOH . T 6 HOH B 103 603 202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . K 3 28.325 -1.372 17.648 1 76.63 ? C1 GOL 409 A 1 HETATM 2 O O1 GOL . . . K 3 28.177 -1.425 16.224 1 63.24 ? O1 GOL 409 A 1 HETATM 3 C C2 GOL . . . K 3 29.81 -1.371 18.071 1 80.23 ? C2 GOL 409 A 1 HETATM 4 O O2 GOL . . . K 3 30.316 -2.715 18.221 1 77.98 ? O2 GOL 409 A 1 HETATM 5 C C3 GOL . . . K 3 29.98 -0.597 19.389 1 75.38 ? C3 GOL 409 A 1 HETATM 6 O O3 GOL . . . K 3 31.265 -0.797 19.994 1 63.48 ? O3 GOL 409 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #