data_3W8V # _model_server_result.job_id dKCQA0OCtpyPkaPqp-cowg _model_server_result.datetime_utc '2024-11-17 02:55:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w8v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":101}' # _entry.id 3W8V # _exptl.entry_id 3W8V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 179.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PARA ACETAMIDO BENZOIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3W8V _cell.length_a 31.168 _cell.length_b 34.162 _cell.length_c 95.067 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W8V _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N ARG 1 A ARG 1 1_555 D C7 TYZ . A TYZ 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.36 ? covale ? covale2 B N ARG 1 B ARG 1 1_555 F C7 TYZ . B TYZ 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B NZ LYS 21 B LYS 21 1_555 G C7 TYZ . B TYZ 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale4 C N ARG 1 C ARG 1 1_555 H C7 TYZ . C TYZ 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale5 C NZ LYS 21 C LYS 21 1_555 I C7 TYZ . C TYZ 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? # _chem_comp.formula 'C9 H9 N O3' _chem_comp.formula_weight 179.173 _chem_comp.id TYZ _chem_comp.mon_nstd_flag . _chem_comp.name 'PARA ACETAMIDO BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C7 TYZ doub 135 n n O2 C7 TYZ sing 136 n n O2 H1 TYZ sing 137 n n C7 C3 TYZ sing 138 n n C3 C4 TYZ sing 139 n y C3 C2 TYZ doub 140 n y C4 C5 TYZ doub 141 n y C4 H4 TYZ sing 142 n n C5 C6 TYZ sing 143 n y C5 H5 TYZ sing 144 n n C6 C1 TYZ doub 145 n y C6 N TYZ sing 146 n n C1 C2 TYZ sing 147 n y C1 HA TYZ sing 148 n n C2 H2 TYZ sing 149 n n C8 N TYZ sing 150 n n C8 O4 TYZ doub 151 n n C8 C9 TYZ sing 152 n n N HN TYZ sing 153 n n C9 H9C1 TYZ sing 154 n n C9 H9C2 TYZ sing 155 n n C9 H9C3 TYZ sing 156 n n # _atom_sites.entry_id 3W8V _atom_sites.fract_transf_matrix[1][1] 0.032084 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029272 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010519 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 TYZ A 1 101 400 TYZ ARR . E 3 EDO A 1 102 402 EDO ETG . F 2 TYZ B 1 101 400 TYZ ARR . G 2 TYZ B 1 102 401 TYZ LAR . H 2 TYZ C 1 101 400 TYZ ARR . I 2 TYZ C 1 102 401 TYZ LAR . J 3 EDO C 1 103 402 EDO ETG . K 4 HOH A 1 201 2 HOH HOH . K 4 HOH A 2 202 3 HOH HOH . K 4 HOH A 3 203 22 HOH HOH . K 4 HOH A 4 204 24 HOH HOH . K 4 HOH A 5 205 29 HOH HOH . K 4 HOH A 6 206 37 HOH HOH . K 4 HOH A 7 207 38 HOH HOH . K 4 HOH A 8 208 40 HOH HOH . K 4 HOH A 9 209 46 HOH HOH . K 4 HOH A 10 210 47 HOH HOH . K 4 HOH A 11 211 48 HOH HOH . K 4 HOH A 12 212 51 HOH HOH . K 4 HOH A 13 213 58 HOH HOH . K 4 HOH A 14 214 61 HOH HOH . K 4 HOH A 15 215 78 HOH HOH . K 4 HOH A 16 216 82 HOH HOH . K 4 HOH A 17 217 83 HOH HOH . K 4 HOH A 18 218 99 HOH HOH . K 4 HOH A 19 219 103 HOH HOH . K 4 HOH A 20 220 109 HOH HOH . L 4 HOH B 1 201 9 HOH HOH . L 4 HOH B 2 202 10 HOH HOH . L 4 HOH B 3 203 13 HOH HOH . L 4 HOH B 4 204 25 HOH HOH . L 4 HOH B 5 205 27 HOH HOH . L 4 HOH B 6 206 32 HOH HOH . L 4 HOH B 7 207 34 HOH HOH . L 4 HOH B 8 208 41 HOH HOH . L 4 HOH B 9 209 42 HOH HOH . L 4 HOH B 10 210 43 HOH HOH . L 4 HOH B 11 211 49 HOH HOH . L 4 HOH B 12 212 55 HOH HOH . L 4 HOH B 13 213 56 HOH HOH . L 4 HOH B 14 214 57 HOH HOH . L 4 HOH B 15 215 64 HOH HOH . L 4 HOH B 16 216 70 HOH HOH . L 4 HOH B 17 217 73 HOH HOH . L 4 HOH B 18 218 75 HOH HOH . L 4 HOH B 19 219 80 HOH HOH . L 4 HOH B 20 220 86 HOH HOH . L 4 HOH B 21 221 112 HOH HOH . L 4 HOH B 22 222 127 HOH HOH . L 4 HOH B 23 223 136 HOH HOH . L 4 HOH B 24 224 142 HOH HOH . L 4 HOH B 25 225 145 HOH HOH . L 4 HOH B 26 226 148 HOH HOH . L 4 HOH B 27 227 149 HOH HOH . M 4 HOH C 1 201 5 HOH HOH . M 4 HOH C 2 202 11 HOH HOH . M 4 HOH C 3 203 14 HOH HOH . M 4 HOH C 4 204 15 HOH HOH . M 4 HOH C 5 205 18 HOH HOH . M 4 HOH C 6 206 20 HOH HOH . M 4 HOH C 7 207 28 HOH HOH . M 4 HOH C 8 208 35 HOH HOH . M 4 HOH C 9 209 50 HOH HOH . M 4 HOH C 10 210 53 HOH HOH . M 4 HOH C 11 211 66 HOH HOH . M 4 HOH C 12 212 74 HOH HOH . M 4 HOH C 13 213 79 HOH HOH . M 4 HOH C 14 214 96 HOH HOH . M 4 HOH C 15 215 122 HOH HOH . M 4 HOH C 16 216 124 HOH HOH . M 4 HOH C 17 217 125 HOH HOH . M 4 HOH C 18 218 129 HOH HOH . M 4 HOH C 19 219 130 HOH HOH . M 4 HOH C 20 220 133 HOH HOH . M 4 HOH C 21 221 139 HOH HOH . M 4 HOH C 22 222 140 HOH HOH . M 4 HOH C 23 223 150 HOH HOH . M 4 HOH C 24 224 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TYZ . . . H 2 -17.923 3.933 32.84 1 39.41 ? O1 TYZ 101 C 1 HETATM 2 C C7 TYZ . . . H 2 -17.625 3.819 34.024 1 38.93 ? C7 TYZ 101 C 1 HETATM 3 C C3 TYZ . . . H 2 -18.722 4.047 35.045 1 42.31 ? C3 TYZ 101 C 1 HETATM 4 C C4 TYZ . . . H 2 -18.44 4.813 36.17 1 39.55 ? C4 TYZ 101 C 1 HETATM 5 C C5 TYZ . . . H 2 -19.443 5.043 37.101 1 44.99 ? C5 TYZ 101 C 1 HETATM 6 C C6 TYZ . . . H 2 -20.737 4.541 36.921 1 46.88 ? C6 TYZ 101 C 1 HETATM 7 C C1 TYZ . . . H 2 -21.027 3.777 35.778 1 45.43 ? C1 TYZ 101 C 1 HETATM 8 C C2 TYZ . . . H 2 -20.033 3.533 34.836 1 46.08 ? C2 TYZ 101 C 1 HETATM 9 C C8 TYZ . . . H 2 -21.523 4.759 39.184 1 52.01 ? C8 TYZ 101 C 1 HETATM 10 N N TYZ . . . H 2 -21.712 4.784 37.856 1 49.14 ? N TYZ 101 C 1 HETATM 11 O O4 TYZ . . . H 2 -20.389 4.669 39.686 1 51.55 ? O4 TYZ 101 C 1 HETATM 12 C C9 TYZ . . . H 2 -22.789 4.848 40.003 1 52.46 ? C9 TYZ 101 C 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 207 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #