data_3W9H
#
_model_server_result.job_id            p6qW774SzY4t2kD-IslIuA 
_model_server_result.datetime_utc      '2024-11-28 02:50:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3w9h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":2000}' 
#
_entry.id    3W9H 
#
_exptl.entry_id    3W9H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              693.776 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[{2-[({[(3R)-1-{8-[(4-tert-butyl-1,3-thiazol-2-yl)carbamoyl]-4-oxo-3-[(E)-2-(1H-tetrazol-5-yl)ethenyl]-4H-pyrido[1,2-a]pyrimidin-2-yl}piperidin-3-yl]oxy}carbonyl)amino]ethyl}(dimethyl)ammonio]acetate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.83 
_cell.angle_gamma         90 
_cell.entry_id            3W9H 
_cell.length_a            226.279 
_cell.length_b            134.16 
_cell.length_c            162.202 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3W9H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C31 H39 N11 O6 S' 
_chem_comp.formula_weight    693.776 
_chem_comp.id                P9D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[{2-[({[(3R)-1-{8-[(4-tert-butyl-1,3-thiazol-2-yl)carbamoyl]-4-oxo-3-[(E)-2-(1H-tetrazol-5-yl)ethenyl]-4H-pyrido[1,2-a]pyrimidin-2-yl}piperidin-3-yl]oxy}carbonyl)amino]ethyl}(dimethyl)ammonio]acetate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 P9D sing 237 n n 
C2 C3 P9D sing 238 n n 
C2 C4 P9D sing 239 n n 
C2 C5 P9D sing 240 n n 
C4 N6 P9D sing 241 n y 
C4 C9 P9D doub 242 n y 
N6 C7 P9D doub 243 n y 
C7 S8 P9D sing 244 n y 
C7 N10 P9D sing 245 n n 
S8 C9 P9D sing 246 n y 
N10 C11 P9D sing 247 n n 
C11 C12 P9D sing 248 n n 
C11 O13 P9D doub 249 n n 
C12 C14 P9D doub 250 n n 
C12 C18 P9D sing 251 n n 
C14 C15 P9D sing 252 n n 
C15 N16 P9D sing 253 n n 
C15 N19 P9D doub 254 n n 
N16 C17 P9D sing 255 n n 
N16 C20 P9D sing 256 n n 
C17 C18 P9D doub 257 n n 
N19 C21 P9D sing 258 n n 
C20 C22 P9D sing 259 n n 
C20 O23 P9D doub 260 n n 
C21 C22 P9D doub 261 n n 
C21 N24 P9D sing 262 n n 
C22 C25 P9D sing 263 n n 
N24 C32 P9D sing 264 n n 
N24 C37 P9D sing 265 n n 
C25 C26 P9D doub 266 e n 
C26 C27 P9D sing 267 n n 
C27 N28 P9D doub 268 n y 
C27 N31 P9D sing 269 n y 
N28 N29 P9D sing 270 n y 
N29 N30 P9D doub 271 n y 
N30 N31 P9D sing 272 n y 
C32 C33 P9D sing 273 n n 
C33 O34 P9D sing 274 n n 
C33 C35 P9D sing 275 n n 
O34 C38 P9D sing 276 n n 
C35 C36 P9D sing 277 n n 
C36 C37 P9D sing 278 n n 
C38 N39 P9D sing 279 n n 
C38 O44 P9D doub 280 n n 
N39 C40 P9D sing 281 n n 
C40 C41 P9D sing 282 n n 
C41 N42 P9D sing 283 n n 
N42 C43 P9D sing 284 n n 
N42 C48 P9D sing 285 n n 
N42 C49 P9D sing 286 n n 
C43 C45 P9D sing 287 n n 
C45 O46 P9D sing 288 n n 
C45 O47 P9D doub 289 n n 
C1 H1 P9D sing 290 n n 
C1 H1A P9D sing 291 n n 
C1 H1B P9D sing 292 n n 
C3 H3 P9D sing 293 n n 
C3 H3A P9D sing 294 n n 
C3 H3B P9D sing 295 n n 
C5 H5 P9D sing 296 n n 
C5 H5A P9D sing 297 n n 
C5 H5B P9D sing 298 n n 
C9 H9 P9D sing 299 n n 
N10 HN10 P9D sing 300 n n 
C14 H14 P9D sing 301 n n 
C17 H17 P9D sing 302 n n 
C18 H18 P9D sing 303 n n 
C25 H25 P9D sing 304 n n 
C26 H26 P9D sing 305 n n 
N31 HN31 P9D sing 306 n n 
C32 H32 P9D sing 307 n n 
C32 H32A P9D sing 308 n n 
C33 H33 P9D sing 309 n n 
C35 H35 P9D sing 310 n n 
C35 H35A P9D sing 311 n n 
C36 H36 P9D sing 312 n n 
C36 H36A P9D sing 313 n n 
C37 H37 P9D sing 314 n n 
C37 H37A P9D sing 315 n n 
N39 HN39 P9D sing 316 n n 
C40 H40 P9D sing 317 n n 
C40 H40A P9D sing 318 n n 
C41 H41 P9D sing 319 n n 
C41 H41A P9D sing 320 n n 
C43 H43 P9D sing 321 n n 
C43 H43A P9D sing 322 n n 
C48 H48 P9D sing 323 n n 
C48 H48A P9D sing 324 n n 
C48 H48B P9D sing 325 n n 
C49 H49 P9D sing 326 n n 
C49 H49A P9D sing 327 n n 
C49 H49B P9D sing 328 n n 
#
_atom_sites.entry_id                     3W9H 
_atom_sites.fract_transf_matrix[1][1]    0.004419 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000607 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007454 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006223 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 P9D B 1 2000 2000 P9D P9D . 
E 3 HOH A 1 2001 2001 HOH HOH . 
E 3 HOH A 2 2002 2003 HOH HOH . 
E 3 HOH A 3 2003 2004 HOH HOH . 
E 3 HOH A 4 2004 2005 HOH HOH . 
E 3 HOH A 5 2005 2006 HOH HOH . 
E 3 HOH A 6 2006 2007 HOH HOH . 
F 3 HOH B 1 2101 2001 HOH HOH . 
F 3 HOH B 2 2102 2002 HOH HOH . 
F 3 HOH B 3 2103 2003 HOH HOH . 
F 3 HOH B 4 2104 2004 HOH HOH . 
G 3 HOH C 1 1101 2002 HOH HOH . 
G 3 HOH C 2 1102 2001 HOH HOH . 
G 3 HOH C 3 1103 2002 HOH HOH . 
G 3 HOH C 4 1104 2003 HOH HOH . 
G 3 HOH C 5 1105 2004 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 P9D . . . D 2 59.256 30.948 42.943 1 103.01 ? C1 P9D 2000 B 1 
HETATM 2 C C2 P9D . . . D 2 58.927 32.021 43.968 1 93.17 ? C2 P9D 2000 B 1 
HETATM 3 C C3 P9D . . . D 2 59.096 31.483 45.394 1 87.52 ? C3 P9D 2000 B 1 
HETATM 4 C C4 P9D . . . D 2 57.527 32.488 43.698 1 90.47 ? C4 P9D 2000 B 1 
HETATM 5 C C5 P9D . . . D 2 59.88 33.188 43.795 1 97.04 ? C5 P9D 2000 B 1 
HETATM 6 N N6 P9D . . . D 2 56.502 31.998 44.435 1 101.05 ? N6 P9D 2000 B 1 
HETATM 7 C C7 P9D . . . D 2 55.382 32.595 43.996 1 99.55 ? C7 P9D 2000 B 1 
HETATM 8 S S8 P9D . . . D 2 55.648 33.63 42.773 1 108.33 ? S8 P9D 2000 B 1 
HETATM 9 C C9 P9D . . . D 2 57.267 33.417 42.697 1 92.05 ? C9 P9D 2000 B 1 
HETATM 10 N N10 P9D . . . D 2 54.182 32.309 44.537 1 93.16 ? N10 P9D 2000 B 1 
HETATM 11 C C11 P9D . . . D 2 53.087 33.054 44.448 1 86.81 ? C11 P9D 2000 B 1 
HETATM 12 C C12 P9D . . . D 2 51.88 32.574 45.218 1 86.71 ? C12 P9D 2000 B 1 
HETATM 13 O O13 P9D . . . D 2 53.044 34.087 43.8 1 84.46 ? O13 P9D 2000 B 1 
HETATM 14 C C14 P9D . . . D 2 52.037 31.486 46.09 1 83.55 ? C14 P9D 2000 B 1 
HETATM 15 C C15 P9D . . . D 2 50.967 31.004 46.832 1 83.28 ? C15 P9D 2000 B 1 
HETATM 16 N N16 P9D . . . D 2 49.678 31.659 46.677 1 82.16 ? N16 P9D 2000 B 1 
HETATM 17 C C17 P9D . . . D 2 49.529 32.788 45.776 1 79.37 ? C17 P9D 2000 B 1 
HETATM 18 C C18 P9D . . . D 2 50.643 33.215 45.068 1 82.49 ? C18 P9D 2000 B 1 
HETATM 19 N N19 P9D . . . D 2 51.147 29.957 47.692 1 83.55 ? N19 P9D 2000 B 1 
HETATM 20 C C20 P9D . . . D 2 48.556 31.17 47.446 1 82 ? C20 P9D 2000 B 1 
HETATM 21 C C21 P9D . . . D 2 50.142 29.429 48.457 1 79.56 ? C21 P9D 2000 B 1 
HETATM 22 C C22 P9D . . . D 2 48.777 30.014 48.373 1 81.12 ? C22 P9D 2000 B 1 
HETATM 23 O O23 P9D . . . D 2 47.441 31.714 47.312 1 79.27 ? O23 P9D 2000 B 1 
HETATM 24 N N24 P9D . . . D 2 50.359 28.347 49.339 1 77.77 ? N24 P9D 2000 B 1 
HETATM 25 C C25 P9D . . . D 2 47.684 29.446 49.193 1 76.27 ? C25 P9D 2000 B 1 
HETATM 26 C C26 P9D . . . D 2 46.534 29.289 48.58 1 81.16 ? C26 P9D 2000 B 1 
HETATM 27 C C27 P9D . . . D 2 45.311 28.747 49.204 1 92.65 ? C27 P9D 2000 B 1 
HETATM 28 N N28 P9D . . . D 2 45.134 27.439 49.401 1 104.16 ? N28 P9D 2000 B 1 
HETATM 29 N N29 P9D . . . D 2 43.852 27.35 49.967 1 104.83 ? N29 P9D 2000 B 1 
HETATM 30 N N30 P9D . . . D 2 43.322 28.662 50.061 1 98.71 ? N30 P9D 2000 B 1 
HETATM 31 N N31 P9D . . . D 2 44.281 29.543 49.542 1 90.37 ? N31 P9D 2000 B 1 
HETATM 32 C C32 P9D . . . D 2 51.06 27.119 48.868 1 81.48 ? C32 P9D 2000 B 1 
HETATM 33 C C33 P9D . . . D 2 50.73 25.82 49.63 1 83.53 ? C33 P9D 2000 B 1 
HETATM 34 O O34 P9D . . . D 2 50.133 24.781 48.799 1 99.54 ? O34 P9D 2000 B 1 
HETATM 35 C C35 P9D . . . D 2 49.89 26.125 50.864 1 85.24 ? C35 P9D 2000 B 1 
HETATM 36 C C36 P9D . . . D 2 50.349 27.402 51.546 1 81.02 ? C36 P9D 2000 B 1 
HETATM 37 C C37 P9D . . . D 2 49.878 28.573 50.703 1 74.44 ? C37 P9D 2000 B 1 
HETATM 38 C C38 P9D . . . D 2 48.675 24.772 48.45 1 105.11 ? C38 P9D 2000 B 1 
HETATM 39 N N39 P9D . . . D 2 47.836 23.923 49.076 1 106.43 ? N39 P9D 2000 B 1 
HETATM 40 C C40 P9D . . . D 2 46.535 24.292 49.615 1 102.72 ? C40 P9D 2000 B 1 
HETATM 41 C C41 P9D . . . D 2 46.241 23.607 50.955 1 117.98 ? C41 P9D 2000 B 1 
HETATM 42 N N42 P9D . . . D 2 46.525 24.388 52.197 1 130.38 ? N42 P9D 2000 B 1 
HETATM 43 C C43 P9D . . . D 2 47.927 24.219 52.656 1 134.6 ? C43 P9D 2000 B 1 
HETATM 44 O O44 P9D . . . D 2 48.254 25.501 47.558 1 94.97 ? O44 P9D 2000 B 1 
HETATM 45 C C45 P9D . . . D 2 48.461 22.874 53.152 1 143.75 ? C45 P9D 2000 B 1 
HETATM 46 O O46 P9D . . . D 2 47.793 22.145 53.926 1 137.76 ? O46 P9D 2000 B 1 
HETATM 47 O O47 P9D . . . D 2 49.612 22.535 52.778 1 145.1 ? O47 P9D 2000 B 1 
HETATM 48 C C48 P9D . . . D 2 46.323 25.826 51.988 1 126.62 ? C48 P9D 2000 B 1 
HETATM 49 C C49 P9D . . . D 2 45.55 24.014 53.239 1 135.14 ? C49 P9D 2000 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           49 
#