data_3W9I # _model_server_result.job_id --GzL3eRjTmNFXdcxT30zQ _model_server_result.datetime_utc '2024-11-23 23:07:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3w9i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":2001}' # _entry.id 3W9I # _exptl.entry_id 3W9I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 87.14 _cell.angle_beta 69.49 _cell.angle_gamma 88.54 _cell.entry_id 3W9I _cell.length_a 124.815 _cell.length_b 133.981 _cell.length_c 150.467 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3W9I _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,N,W,X,Y 1 1 D,E,F,O,P,Q,R,S,T,U,V,Z 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 194 n n C1B O1B LMT sing 195 n n C1B O5B LMT sing 196 n n C1B H1B LMT sing 197 n n C2B C3B LMT sing 198 n n C2B O2B LMT sing 199 n n C2B H2B LMT sing 200 n n C3B C4B LMT sing 201 n n C3B O3B LMT sing 202 n n C3B H3B LMT sing 203 n n C4B C5B LMT sing 204 n n C4B O4' LMT sing 205 n n C4B H4B LMT sing 206 n n C5B C6B LMT sing 207 n n C5B O5B LMT sing 208 n n C5B H5B LMT sing 209 n n C6B O6B LMT sing 210 n n C6B "H6'2" LMT sing 211 n n C6B "H6'1" LMT sing 212 n n O1B C4' LMT sing 213 n n O2B H2O1 LMT sing 214 n n O3B H3O1 LMT sing 215 n n O4' H4O1 LMT sing 216 n n O6B H6B LMT sing 217 n n C1' C2' LMT sing 218 n n C1' O1' LMT sing 219 n n C1' O5' LMT sing 220 n n C1' H1' LMT sing 221 n n C2' C3' LMT sing 222 n n C2' O2' LMT sing 223 n n C2' H2' LMT sing 224 n n C3' C4' LMT sing 225 n n C3' O3' LMT sing 226 n n C3' H3' LMT sing 227 n n C4' C5' LMT sing 228 n n C4' H4' LMT sing 229 n n C5' C6' LMT sing 230 n n C5' O5' LMT sing 231 n n C5' H5' LMT sing 232 n n C6' O6' LMT sing 233 n n C6' H6D LMT sing 234 n n C6' H6E LMT sing 235 n n O1' C1 LMT sing 236 n n O2' H2O2 LMT sing 237 n n O3' H3O2 LMT sing 238 n n O6' H6' LMT sing 239 n n C1 C2 LMT sing 240 n n C1 H12 LMT sing 241 n n C1 H11 LMT sing 242 n n C2 C3 LMT sing 243 n n C2 H22 LMT sing 244 n n C2 H21 LMT sing 245 n n C3 C4 LMT sing 246 n n C3 H32 LMT sing 247 n n C3 H31 LMT sing 248 n n C4 C5 LMT sing 249 n n C4 H42 LMT sing 250 n n C4 H41 LMT sing 251 n n C5 C6 LMT sing 252 n n C5 H52 LMT sing 253 n n C5 H51 LMT sing 254 n n C6 C7 LMT sing 255 n n C6 H62 LMT sing 256 n n C6 H61 LMT sing 257 n n C7 C8 LMT sing 258 n n C7 H72 LMT sing 259 n n C7 H71 LMT sing 260 n n C8 C9 LMT sing 261 n n C8 H82 LMT sing 262 n n C8 H81 LMT sing 263 n n C9 C10 LMT sing 264 n n C9 H92 LMT sing 265 n n C9 H91 LMT sing 266 n n C10 C11 LMT sing 267 n n C10 H102 LMT sing 268 n n C10 H101 LMT sing 269 n n C11 C12 LMT sing 270 n n C11 H112 LMT sing 271 n n C11 H111 LMT sing 272 n n C12 H123 LMT sing 273 n n C12 H122 LMT sing 274 n n C12 H121 LMT sing 275 n n # _atom_sites.entry_id 3W9I _atom_sites.fract_transf_matrix[1][1] 0.008012 _atom_sites.fract_transf_matrix[1][2] -0.000204 _atom_sites.fract_transf_matrix[1][3] -0.002991 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007466 _atom_sites.fract_transf_matrix[2][3] -0.000327 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007103 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 LMT A 1 1101 2002 LMT LMT . H 2 LMT A 1 1102 2003 LMT LMT . I 2 LMT B 1 2001 2001 LMT LMT . J 2 LMT B 1 2002 2002 LMT LMT . K 2 LMT B 1 2003 2003 LMT LMT . L 2 LMT B 1 2004 2004 LMT LMT . M 2 LMT C 1 2001 2001 LMT LMT . N 2 LMT C 1 2002 2001 LMT LMT . O 2 LMT D 1 2001 2001 LMT LMT . P 2 LMT D 1 2002 2002 LMT LMT . Q 2 LMT D 1 2003 2003 LMT LMT . R 2 LMT E 1 2001 2001 LMT LMT . S 2 LMT E 1 2002 2002 LMT LMT . T 2 LMT E 1 2003 2003 LMT LMT . U 2 LMT F 1 2001 2001 LMT LMT . V 2 LMT F 1 2002 2002 LMT LMT . W 3 HOH A 1 1201 2012 HOH HOH . X 3 HOH B 1 2101 2011 HOH HOH . X 3 HOH B 2 2102 2012 HOH HOH . X 3 HOH B 3 2103 2013 HOH HOH . Y 3 HOH C 1 2101 2011 HOH HOH . Z 3 HOH D 1 2101 2011 HOH HOH . Z 3 HOH D 2 2102 2012 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . O 2 9.177 -27.235 33.293 0.6 81.48 ? C1B LMT 2001 D 1 HETATM 2 C C2B LMT . . . O 2 7.852 -27.533 32.545 0.6 75.2 ? C2B LMT 2001 D 1 HETATM 3 C C3B LMT . . . O 2 7.999 -28.579 31.437 0.6 68.54 ? C3B LMT 2001 D 1 HETATM 4 C C4B LMT . . . O 2 9.091 -28.183 30.436 0.6 70.78 ? C4B LMT 2001 D 1 HETATM 5 C C5B LMT . . . O 2 10.395 -27.719 31.105 0.6 78.61 ? C5B LMT 2001 D 1 HETATM 6 C C6B LMT . . . O 2 10.842 -26.346 30.557 0.6 76.57 ? C6B LMT 2001 D 1 HETATM 7 O O1B LMT . . . O 2 9.202 -27.545 34.732 0.6 72.96 ? O1B LMT 2001 D 1 HETATM 8 O O2B LMT . . . O 2 6.796 -27.888 33.441 0.6 76.51 ? O2B LMT 2001 D 1 HETATM 9 O O3B LMT . . . O 2 6.743 -28.674 30.768 0.6 65.18 ? O3B LMT 2001 D 1 HETATM 10 O O4' LMT . . . O 2 9.423 -29.284 29.593 0.6 65.46 ? O4' LMT 2001 D 1 HETATM 11 O O5B LMT . . . O 2 10.334 -27.754 32.566 0.6 89.81 ? O5B LMT 2001 D 1 HETATM 12 O O6B LMT . . . O 2 11.993 -26.433 29.698 0.6 62.9 ? O6B LMT 2001 D 1 HETATM 13 C C1' LMT . . . O 2 10.592 -30.502 37.112 0.6 64.18 ? C1' LMT 2001 D 1 HETATM 14 C C2' LMT . . . O 2 10.158 -31 35.739 0.6 65.64 ? C2' LMT 2001 D 1 HETATM 15 C C3' LMT . . . O 2 9.963 -29.857 34.774 0.6 69.92 ? C3' LMT 2001 D 1 HETATM 16 C C4' LMT . . . O 2 8.899 -28.863 35.229 0.6 69.49 ? C4' LMT 2001 D 1 HETATM 17 C C5' LMT . . . O 2 8.671 -28.885 36.761 0.6 70.77 ? C5' LMT 2001 D 1 HETATM 18 C C6' LMT . . . O 2 7.387 -29.688 37.109 0.6 77.76 ? C6' LMT 2001 D 1 HETATM 19 O O1' LMT . . . O 2 10.556 -31.646 38.003 0.6 56.87 ? O1' LMT 2001 D 1 HETATM 20 O O2' LMT . . . O 2 11.203 -31.806 35.209 0.6 67.05 ? O2' LMT 2001 D 1 HETATM 21 O O3' LMT . . . O 2 9.562 -30.438 33.526 0.6 79.07 ? O3' LMT 2001 D 1 HETATM 22 O O5' LMT . . . O 2 9.831 -29.325 37.535 0.6 64.08 ? O5' LMT 2001 D 1 HETATM 23 O O6' LMT . . . O 2 6.3 -28.937 37.704 0.6 76.11 ? O6' LMT 2001 D 1 HETATM 24 C C1 LMT . . . O 2 11.78 -32.41 38.097 0.6 50.88 ? C1 LMT 2001 D 1 HETATM 25 C C2 LMT . . . O 2 11.532 -33.915 38.049 0.6 47.92 ? C2 LMT 2001 D 1 HETATM 26 C C3 LMT . . . O 2 12.539 -34.726 38.863 0.6 47.5 ? C3 LMT 2001 D 1 HETATM 27 C C4 LMT . . . O 2 12.785 -36.089 38.202 0.6 52.67 ? C4 LMT 2001 D 1 HETATM 28 C C5 LMT . . . O 2 12.523 -37.278 39.141 0.6 51.89 ? C5 LMT 2001 D 1 HETATM 29 C C6 LMT . . . O 2 13.064 -38.642 38.682 0.6 48.25 ? C6 LMT 2001 D 1 HETATM 30 C C7 LMT . . . O 2 13.684 -39.388 39.874 0.6 47.27 ? C7 LMT 2001 D 1 HETATM 31 C C8 LMT . . . O 2 14.322 -40.734 39.528 0.6 47.24 ? C8 LMT 2001 D 1 HETATM 32 C C9 LMT . . . O 2 14.549 -41.637 40.742 0.6 48.58 ? C9 LMT 2001 D 1 HETATM 33 C C10 LMT . . . O 2 13.91 -43.024 40.563 0.6 55.06 ? C10 LMT 2001 D 1 HETATM 34 C C11 LMT . . . O 2 13.927 -43.95 41.797 0.6 55.58 ? C11 LMT 2001 D 1 HETATM 35 C C12 LMT . . . O 2 12.681 -43.85 42.668 0.6 54.08 ? C12 LMT 2001 D 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 51 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 35 #