data_3WA4
#
_model_server_result.job_id            UMpp71pxhQzh34JMcTaZ7A 
_model_server_result.datetime_utc      '2024-11-04 20:37:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3wa4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    3WA4 
#
_exptl.entry_id    3WA4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              60.052 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3WA4 
_cell.length_a            59.01 
_cell.length_b            59.01 
_cell.length_c            117.09 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3WA4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E 1 1 
B,F 2 1 
A,B,C,D,E,F 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C ASP 2 B ASP 190 1_555 B N PTR 3 B PTR 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? 
covale ? covale2 B C PTR 3 B PTR 191 1_555 B N MET 4 B MET 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
metalc ? metalc1 A NE2 HIS 25 A HIS 79 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc2 A OE1 GLU 98 A GLU 152 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? 
metalc ? metalc3 A OE2 GLU 98 A GLU 152 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? 
metalc ? metalc4 C CD CD . A CD 201 1_555 D O ACY . A ACY 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc5 C CD CD . A CD 201 1_555 D OXT ACY . A ACY 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? 
#
_chem_comp.formula           'C2 H4 O2' 
_chem_comp.formula_weight    60.052 
_chem_comp.id                ACY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACY doub 1 n n 
C OXT ACY sing 2 n n 
C CH3 ACY sing 3 n n 
OXT HXT ACY sing 4 n n 
CH3 H1 ACY sing 5 n n 
CH3 H2 ACY sing 6 n n 
CH3 H3 ACY sing 7 n n 
#
_atom_sites.entry_id                     3WA4 
_atom_sites.fract_transf_matrix[1][1]    0.016946 
_atom_sites.fract_transf_matrix[1][2]    0.009784 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019568 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00854 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CD A 1 201 1 CD CD . 
D 4 ACY A 1 202 501 ACY ACY . 
E 5 HOH A 1 301 2 HOH HOH . 
E 5 HOH A 2 302 3 HOH HOH . 
E 5 HOH A 3 303 4 HOH HOH . 
E 5 HOH A 4 304 5 HOH HOH . 
E 5 HOH A 5 305 6 HOH HOH . 
E 5 HOH A 6 306 7 HOH HOH . 
E 5 HOH A 7 307 8 HOH HOH . 
E 5 HOH A 8 308 9 HOH HOH . 
E 5 HOH A 9 309 10 HOH HOH . 
E 5 HOH A 10 310 11 HOH HOH . 
E 5 HOH A 11 311 12 HOH HOH . 
E 5 HOH A 12 312 13 HOH HOH . 
E 5 HOH A 13 313 14 HOH HOH . 
E 5 HOH A 14 314 15 HOH HOH . 
E 5 HOH A 15 315 16 HOH HOH . 
E 5 HOH A 16 316 17 HOH HOH . 
E 5 HOH A 17 317 18 HOH HOH . 
E 5 HOH A 18 318 19 HOH HOH . 
E 5 HOH A 19 319 20 HOH HOH . 
E 5 HOH A 20 320 21 HOH HOH . 
E 5 HOH A 21 321 22 HOH HOH . 
E 5 HOH A 22 322 23 HOH HOH . 
E 5 HOH A 23 323 25 HOH HOH . 
E 5 HOH A 24 324 26 HOH HOH . 
E 5 HOH A 25 325 27 HOH HOH . 
E 5 HOH A 26 326 28 HOH HOH . 
E 5 HOH A 27 327 29 HOH HOH . 
E 5 HOH A 28 328 30 HOH HOH . 
E 5 HOH A 29 329 31 HOH HOH . 
E 5 HOH A 30 330 32 HOH HOH . 
E 5 HOH A 31 331 33 HOH HOH . 
E 5 HOH A 32 332 34 HOH HOH . 
E 5 HOH A 33 333 35 HOH HOH . 
E 5 HOH A 34 334 36 HOH HOH . 
E 5 HOH A 35 335 37 HOH HOH . 
E 5 HOH A 36 336 38 HOH HOH . 
E 5 HOH A 37 337 39 HOH HOH . 
E 5 HOH A 38 338 40 HOH HOH . 
E 5 HOH A 39 339 41 HOH HOH . 
E 5 HOH A 40 340 42 HOH HOH . 
E 5 HOH A 41 341 43 HOH HOH . 
E 5 HOH A 42 342 44 HOH HOH . 
E 5 HOH A 43 343 45 HOH HOH . 
E 5 HOH A 44 344 46 HOH HOH . 
E 5 HOH A 45 345 47 HOH HOH . 
E 5 HOH A 46 346 48 HOH HOH . 
E 5 HOH A 47 347 49 HOH HOH . 
E 5 HOH A 48 348 50 HOH HOH . 
E 5 HOH A 49 349 51 HOH HOH . 
E 5 HOH A 50 350 52 HOH HOH . 
E 5 HOH A 51 351 53 HOH HOH . 
E 5 HOH A 52 352 54 HOH HOH . 
E 5 HOH A 53 353 55 HOH HOH . 
E 5 HOH A 54 354 56 HOH HOH . 
E 5 HOH A 55 355 57 HOH HOH . 
E 5 HOH A 56 356 58 HOH HOH . 
E 5 HOH A 57 357 59 HOH HOH . 
E 5 HOH A 58 358 61 HOH HOH . 
E 5 HOH A 59 359 62 HOH HOH . 
E 5 HOH A 60 360 63 HOH HOH . 
E 5 HOH A 61 361 64 HOH HOH . 
E 5 HOH A 62 362 65 HOH HOH . 
E 5 HOH A 63 363 66 HOH HOH . 
F 5 HOH B 1 201 24 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACY . . . D 4 0.124 33.621 -7.095 1 15.87 ? C ACY 202 A 1 
HETATM 2 O O ACY . . . D 4 0.396 32.465 -7.374 1 20.98 ? O ACY 202 A 1 
HETATM 3 O OXT ACY . . . D 4 -0.665 33.756 -6.311 1 19.63 ? OXT ACY 202 A 1 
HETATM 4 C CH3 ACY . . . D 4 0.671 34.843 -7.789 1 20.12 ? CH3 ACY 202 A 1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#