data_3WAN
#
_model_server_result.job_id            GSZP8HMiV6shc53Mp9BoMQ 
_model_server_result.datetime_utc      '2024-11-30 11:36:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3wan 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    3WAN 
#
_exptl.entry_id    3WAN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.22 
_cell.angle_gamma         90 
_cell.entry_id            3WAN 
_cell.length_a            34.73 
_cell.length_b            47.88 
_cell.length_c            77.08 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3WAN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 237 n n 
C1 H11 MPD sing 238 n n 
C1 H12 MPD sing 239 n n 
C1 H13 MPD sing 240 n n 
C2 O2 MPD sing 241 n n 
C2 CM MPD sing 242 n n 
C2 C3 MPD sing 243 n n 
O2 HO2 MPD sing 244 n n 
CM HM1 MPD sing 245 n n 
CM HM2 MPD sing 246 n n 
CM HM3 MPD sing 247 n n 
C3 C4 MPD sing 248 n n 
C3 H31 MPD sing 249 n n 
C3 H32 MPD sing 250 n n 
C4 O4 MPD sing 251 n n 
C4 C5 MPD sing 252 n n 
C4 H4 MPD sing 253 n n 
O4 HO4 MPD sing 254 n n 
C5 H51 MPD sing 255 n n 
C5 H52 MPD sing 256 n n 
C5 H53 MPD sing 257 n n 
#
_atom_sites.entry_id                     3WAN 
_atom_sites.fract_transf_matrix[1][1]    0.028794 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002125 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020886 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013009 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MPD A 1 201 201 MPD MPD . 
D 3 HOH A 1 301 301 HOH HOH . 
D 3 HOH A 2 302 302 HOH HOH . 
D 3 HOH A 3 303 303 HOH HOH . 
D 3 HOH A 4 304 306 HOH HOH . 
D 3 HOH A 5 305 308 HOH HOH . 
D 3 HOH A 6 306 310 HOH HOH . 
D 3 HOH A 7 307 311 HOH HOH . 
D 3 HOH A 8 308 312 HOH HOH . 
D 3 HOH A 9 309 313 HOH HOH . 
D 3 HOH A 10 310 314 HOH HOH . 
D 3 HOH A 11 311 315 HOH HOH . 
D 3 HOH A 12 312 316 HOH HOH . 
D 3 HOH A 13 313 317 HOH HOH . 
D 3 HOH A 14 314 321 HOH HOH . 
D 3 HOH A 15 315 323 HOH HOH . 
D 3 HOH A 16 316 328 HOH HOH . 
D 3 HOH A 17 317 329 HOH HOH . 
D 3 HOH A 18 318 337 HOH HOH . 
D 3 HOH A 19 319 338 HOH HOH . 
D 3 HOH A 20 320 341 HOH HOH . 
D 3 HOH A 21 321 342 HOH HOH . 
D 3 HOH A 22 322 343 HOH HOH . 
D 3 HOH A 23 323 344 HOH HOH . 
D 3 HOH A 24 324 345 HOH HOH . 
D 3 HOH A 25 325 347 HOH HOH . 
D 3 HOH A 26 326 349 HOH HOH . 
D 3 HOH A 27 327 351 HOH HOH . 
D 3 HOH A 28 328 352 HOH HOH . 
D 3 HOH A 29 329 353 HOH HOH . 
D 3 HOH A 30 330 355 HOH HOH . 
D 3 HOH A 31 331 357 HOH HOH . 
D 3 HOH A 32 332 358 HOH HOH . 
D 3 HOH A 33 333 360 HOH HOH . 
D 3 HOH A 34 334 361 HOH HOH . 
D 3 HOH A 35 335 362 HOH HOH . 
D 3 HOH A 36 336 364 HOH HOH . 
D 3 HOH A 37 337 365 HOH HOH . 
D 3 HOH A 38 338 367 HOH HOH . 
D 3 HOH A 39 339 368 HOH HOH . 
D 3 HOH A 40 340 369 HOH HOH . 
D 3 HOH A 41 341 371 HOH HOH . 
D 3 HOH A 42 342 372 HOH HOH . 
D 3 HOH A 43 343 373 HOH HOH . 
D 3 HOH A 44 344 374 HOH HOH . 
D 3 HOH A 45 345 376 HOH HOH . 
D 3 HOH A 46 346 380 HOH HOH . 
D 3 HOH A 47 347 384 HOH HOH . 
D 3 HOH A 48 348 387 HOH HOH . 
D 3 HOH A 49 349 390 HOH HOH . 
D 3 HOH A 50 350 394 HOH HOH . 
D 3 HOH A 51 351 395 HOH HOH . 
D 3 HOH A 52 352 401 HOH HOH . 
D 3 HOH A 53 353 402 HOH HOH . 
D 3 HOH A 54 354 403 HOH HOH . 
D 3 HOH A 55 355 405 HOH HOH . 
D 3 HOH A 56 356 407 HOH HOH . 
D 3 HOH A 57 357 408 HOH HOH . 
D 3 HOH A 58 358 409 HOH HOH . 
D 3 HOH A 59 359 412 HOH HOH . 
D 3 HOH A 60 360 413 HOH HOH . 
D 3 HOH A 61 361 414 HOH HOH . 
D 3 HOH A 62 362 415 HOH HOH . 
D 3 HOH A 63 363 419 HOH HOH . 
D 3 HOH A 64 364 420 HOH HOH . 
D 3 HOH A 65 365 421 HOH HOH . 
D 3 HOH A 66 366 422 HOH HOH . 
D 3 HOH A 67 367 423 HOH HOH . 
D 3 HOH A 68 368 424 HOH HOH . 
D 3 HOH A 69 369 426 HOH HOH . 
D 3 HOH A 70 370 427 HOH HOH . 
D 3 HOH A 71 371 428 HOH HOH . 
D 3 HOH A 72 372 429 HOH HOH . 
D 3 HOH A 73 373 431 HOH HOH . 
D 3 HOH A 74 374 433 HOH HOH . 
D 3 HOH A 75 375 437 HOH HOH . 
D 3 HOH A 76 376 441 HOH HOH . 
D 3 HOH A 77 377 443 HOH HOH . 
D 3 HOH A 78 378 445 HOH HOH . 
D 3 HOH A 79 379 446 HOH HOH . 
D 3 HOH A 80 380 448 HOH HOH . 
D 3 HOH A 81 381 451 HOH HOH . 
D 3 HOH A 82 382 452 HOH HOH . 
D 3 HOH A 83 383 453 HOH HOH . 
D 3 HOH A 84 384 455 HOH HOH . 
D 3 HOH A 85 385 458 HOH HOH . 
D 3 HOH A 86 386 463 HOH HOH . 
D 3 HOH A 87 387 465 HOH HOH . 
D 3 HOH A 88 388 471 HOH HOH . 
D 3 HOH A 89 389 474 HOH HOH . 
D 3 HOH A 90 390 475 HOH HOH . 
D 3 HOH A 91 391 476 HOH HOH . 
D 3 HOH A 92 392 477 HOH HOH . 
D 3 HOH A 93 393 481 HOH HOH . 
D 3 HOH A 94 394 482 HOH HOH . 
D 3 HOH A 95 395 483 HOH HOH . 
D 3 HOH A 96 396 484 HOH HOH . 
D 3 HOH A 97 397 486 HOH HOH . 
D 3 HOH A 98 398 487 HOH HOH . 
D 3 HOH A 99 399 489 HOH HOH . 
D 3 HOH A 100 400 493 HOH HOH . 
D 3 HOH A 101 401 495 HOH HOH . 
D 3 HOH A 102 402 496 HOH HOH . 
D 3 HOH A 103 403 497 HOH HOH . 
D 3 HOH A 104 404 500 HOH HOH . 
D 3 HOH A 105 405 501 HOH HOH . 
D 3 HOH A 106 406 502 HOH HOH . 
D 3 HOH A 107 407 504 HOH HOH . 
D 3 HOH A 108 408 505 HOH HOH . 
D 3 HOH A 109 409 510 HOH HOH . 
D 3 HOH A 110 410 511 HOH HOH . 
D 3 HOH A 111 411 523 HOH HOH . 
D 3 HOH A 112 412 528 HOH HOH . 
D 3 HOH A 113 413 530 HOH HOH . 
D 3 HOH A 114 414 534 HOH HOH . 
D 3 HOH A 115 415 535 HOH HOH . 
D 3 HOH A 116 416 538 HOH HOH . 
D 3 HOH A 117 417 539 HOH HOH . 
D 3 HOH A 118 418 542 HOH HOH . 
D 3 HOH A 119 419 545 HOH HOH . 
D 3 HOH A 120 420 549 HOH HOH . 
D 3 HOH A 121 421 550 HOH HOH . 
D 3 HOH A 122 422 552 HOH HOH . 
E 3 HOH B 1 201 537 HOH HOH . 
E 3 HOH B 2 202 301 HOH HOH . 
E 3 HOH B 3 203 302 HOH HOH . 
E 3 HOH B 4 204 304 HOH HOH . 
E 3 HOH B 5 205 306 HOH HOH . 
E 3 HOH B 6 206 315 HOH HOH . 
E 3 HOH B 7 207 316 HOH HOH . 
E 3 HOH B 8 208 317 HOH HOH . 
E 3 HOH B 9 209 319 HOH HOH . 
E 3 HOH B 10 210 321 HOH HOH . 
E 3 HOH B 11 211 322 HOH HOH . 
E 3 HOH B 12 212 323 HOH HOH . 
E 3 HOH B 13 213 324 HOH HOH . 
E 3 HOH B 14 214 327 HOH HOH . 
E 3 HOH B 15 215 328 HOH HOH . 
E 3 HOH B 16 216 329 HOH HOH . 
E 3 HOH B 17 217 330 HOH HOH . 
E 3 HOH B 18 218 331 HOH HOH . 
E 3 HOH B 19 219 332 HOH HOH . 
E 3 HOH B 20 220 333 HOH HOH . 
E 3 HOH B 21 221 336 HOH HOH . 
E 3 HOH B 22 222 337 HOH HOH . 
E 3 HOH B 23 223 343 HOH HOH . 
E 3 HOH B 24 224 345 HOH HOH . 
E 3 HOH B 25 225 347 HOH HOH . 
E 3 HOH B 26 226 351 HOH HOH . 
E 3 HOH B 27 227 353 HOH HOH . 
E 3 HOH B 28 228 356 HOH HOH . 
E 3 HOH B 29 229 360 HOH HOH . 
E 3 HOH B 30 230 363 HOH HOH . 
E 3 HOH B 31 231 367 HOH HOH . 
E 3 HOH B 32 232 372 HOH HOH . 
E 3 HOH B 33 233 374 HOH HOH . 
E 3 HOH B 34 234 375 HOH HOH . 
E 3 HOH B 35 235 376 HOH HOH . 
E 3 HOH B 36 236 378 HOH HOH . 
E 3 HOH B 37 237 379 HOH HOH . 
E 3 HOH B 38 238 380 HOH HOH . 
E 3 HOH B 39 239 382 HOH HOH . 
E 3 HOH B 40 240 383 HOH HOH . 
E 3 HOH B 41 241 385 HOH HOH . 
E 3 HOH B 42 242 386 HOH HOH . 
E 3 HOH B 43 243 388 HOH HOH . 
E 3 HOH B 44 244 389 HOH HOH . 
E 3 HOH B 45 245 390 HOH HOH . 
E 3 HOH B 46 246 393 HOH HOH . 
E 3 HOH B 47 247 394 HOH HOH . 
E 3 HOH B 48 248 395 HOH HOH . 
E 3 HOH B 49 249 396 HOH HOH . 
E 3 HOH B 50 250 397 HOH HOH . 
E 3 HOH B 51 251 401 HOH HOH . 
E 3 HOH B 52 252 403 HOH HOH . 
E 3 HOH B 53 253 407 HOH HOH . 
E 3 HOH B 54 254 408 HOH HOH . 
E 3 HOH B 55 255 413 HOH HOH . 
E 3 HOH B 56 256 414 HOH HOH . 
E 3 HOH B 57 257 415 HOH HOH . 
E 3 HOH B 58 258 422 HOH HOH . 
E 3 HOH B 59 259 427 HOH HOH . 
E 3 HOH B 60 260 429 HOH HOH . 
E 3 HOH B 61 261 431 HOH HOH . 
E 3 HOH B 62 262 432 HOH HOH . 
E 3 HOH B 63 263 433 HOH HOH . 
E 3 HOH B 64 264 435 HOH HOH . 
E 3 HOH B 65 265 436 HOH HOH . 
E 3 HOH B 66 266 437 HOH HOH . 
E 3 HOH B 67 267 439 HOH HOH . 
E 3 HOH B 68 268 441 HOH HOH . 
E 3 HOH B 69 269 444 HOH HOH . 
E 3 HOH B 70 270 446 HOH HOH . 
E 3 HOH B 71 271 447 HOH HOH . 
E 3 HOH B 72 272 451 HOH HOH . 
E 3 HOH B 73 273 453 HOH HOH . 
E 3 HOH B 74 274 454 HOH HOH . 
E 3 HOH B 75 275 456 HOH HOH . 
E 3 HOH B 76 276 457 HOH HOH . 
E 3 HOH B 77 277 458 HOH HOH . 
E 3 HOH B 78 278 459 HOH HOH . 
E 3 HOH B 79 279 461 HOH HOH . 
E 3 HOH B 80 280 463 HOH HOH . 
E 3 HOH B 81 281 464 HOH HOH . 
E 3 HOH B 82 282 465 HOH HOH . 
E 3 HOH B 83 283 466 HOH HOH . 
E 3 HOH B 84 284 467 HOH HOH . 
E 3 HOH B 85 285 469 HOH HOH . 
E 3 HOH B 86 286 470 HOH HOH . 
E 3 HOH B 87 287 475 HOH HOH . 
E 3 HOH B 88 288 476 HOH HOH . 
E 3 HOH B 89 289 477 HOH HOH . 
E 3 HOH B 90 290 482 HOH HOH . 
E 3 HOH B 91 291 485 HOH HOH . 
E 3 HOH B 92 292 487 HOH HOH . 
E 3 HOH B 93 293 488 HOH HOH . 
E 3 HOH B 94 294 489 HOH HOH . 
E 3 HOH B 95 295 491 HOH HOH . 
E 3 HOH B 96 296 495 HOH HOH . 
E 3 HOH B 97 297 496 HOH HOH . 
E 3 HOH B 98 298 500 HOH HOH . 
E 3 HOH B 99 299 503 HOH HOH . 
E 3 HOH B 100 300 504 HOH HOH . 
E 3 HOH B 101 301 505 HOH HOH . 
E 3 HOH B 102 302 506 HOH HOH . 
E 3 HOH B 103 303 509 HOH HOH . 
E 3 HOH B 104 304 510 HOH HOH . 
E 3 HOH B 105 305 511 HOH HOH . 
E 3 HOH B 106 306 512 HOH HOH . 
E 3 HOH B 107 307 513 HOH HOH . 
E 3 HOH B 108 308 514 HOH HOH . 
E 3 HOH B 109 309 515 HOH HOH . 
E 3 HOH B 110 310 516 HOH HOH . 
E 3 HOH B 111 311 517 HOH HOH . 
E 3 HOH B 112 312 518 HOH HOH . 
E 3 HOH B 113 313 519 HOH HOH . 
E 3 HOH B 114 314 521 HOH HOH . 
E 3 HOH B 115 315 522 HOH HOH . 
E 3 HOH B 116 316 523 HOH HOH . 
E 3 HOH B 117 317 524 HOH HOH . 
E 3 HOH B 118 318 526 HOH HOH . 
E 3 HOH B 119 319 528 HOH HOH . 
E 3 HOH B 120 320 529 HOH HOH . 
E 3 HOH B 121 321 530 HOH HOH . 
E 3 HOH B 122 322 533 HOH HOH . 
E 3 HOH B 123 323 537 HOH HOH . 
E 3 HOH B 124 324 538 HOH HOH . 
E 3 HOH B 125 325 540 HOH HOH . 
E 3 HOH B 126 326 541 HOH HOH . 
E 3 HOH B 127 327 543 HOH HOH . 
E 3 HOH B 128 328 544 HOH HOH . 
E 3 HOH B 129 329 545 HOH HOH . 
E 3 HOH B 130 330 548 HOH HOH . 
E 3 HOH B 131 331 550 HOH HOH . 
E 3 HOH B 132 332 551 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . C 2 6.739 8.333 -2.65 1 31.03 ? C1 MPD 201 A 1 
HETATM 2 C C2 MPD . . . C 2 5.849 9.471 -3.132 1 31.53 ? C2 MPD 201 A 1 
HETATM 3 O O2 MPD . . . C 2 4.863 9.735 -2.127 1 36.06 ? O2 MPD 201 A 1 
HETATM 4 C CM MPD . . . C 2 6.519 10.834 -3.175 1 28.33 ? CM MPD 201 A 1 
HETATM 5 C C3 MPD . . . C 2 5.206 9.117 -4.488 1 26.82 ? C3 MPD 201 A 1 
HETATM 6 C C4 MPD . . . C 2 4.604 7.712 -4.668 1 28.9 ? C4 MPD 201 A 1 
HETATM 7 O O4 MPD . . . C 2 3.567 7.554 -3.648 1 24.96 ? O4 MPD 201 A 1 
HETATM 8 C C5 MPD . . . C 2 4.022 7.534 -6.078 1 26.89 ? C5 MPD 201 A 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#