data_3WB2
#
_model_server_result.job_id            Nd6et53On4-IbBajSCoLUA 
_model_server_result.datetime_utc      '2024-11-28 16:59:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3wb2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":205}' 
#
_entry.id    3WB2 
#
_exptl.entry_id    3WB2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3WB2 
_cell.length_a            115.01 
_cell.length_b            97.37 
_cell.length_c            63.54 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3WB2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 160 A GLU 160 1_555 I MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc2 A OE2 GLU 160 A GLU 160 1_555 I MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc3 G MG MG . A MG 203 1_555 H O3B GDP . A GDP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? 
metalc ? metalc4 G MG MG . A MG 203 1_555 H O1A GDP . A GDP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc5 G MG MG . A MG 203 1_555 L O HOH . A HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? 
metalc ? metalc6 G MG MG . A MG 203 1_555 L O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc7 G MG MG . A MG 203 1_555 L O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc8 G MG MG . A MG 203 1_555 L O HOH . A HOH 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? 
metalc ? metalc9 I MG MG . A MG 205 1_555 L O HOH . A HOH 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc10 I MG MG . A MG 205 1_555 L O HOH . A HOH 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3WB2 
_atom_sites.fract_transf_matrix[1][1]    0.008695 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01027 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015738 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 YGP A 1 201 1 YGP GPY . 
F 2 YGP A 1 202 2 YGP GPY . 
G 3 MG A 1 203 1 MG MG . 
H 4 GDP A 1 204 1 GDP GDP . 
I 3 MG A 1 205 1 MG MG . 
J 2 YGP C 1 201 3 YGP GPY . 
K 2 YGP C 1 202 4 YGP GPY . 
L 5 HOH A 1 301 7 HOH HOH . 
L 5 HOH A 2 302 12 HOH HOH . 
L 5 HOH A 3 303 13 HOH HOH . 
L 5 HOH A 4 304 14 HOH HOH . 
L 5 HOH A 5 305 23 HOH HOH . 
L 5 HOH A 6 306 24 HOH HOH . 
L 5 HOH A 7 307 25 HOH HOH . 
L 5 HOH A 8 308 27 HOH HOH . 
L 5 HOH A 9 309 28 HOH HOH . 
L 5 HOH A 10 310 30 HOH HOH . 
L 5 HOH A 11 311 38 HOH HOH . 
L 5 HOH A 12 312 41 HOH HOH . 
L 5 HOH A 13 313 42 HOH HOH . 
L 5 HOH A 14 314 50 HOH HOH . 
L 5 HOH A 15 315 56 HOH HOH . 
L 5 HOH A 16 316 62 HOH HOH . 
L 5 HOH A 17 317 74 HOH HOH . 
L 5 HOH A 18 318 76 HOH HOH . 
L 5 HOH A 19 319 79 HOH HOH . 
L 5 HOH A 20 320 84 HOH HOH . 
L 5 HOH A 21 321 85 HOH HOH . 
L 5 HOH A 22 322 88 HOH HOH . 
L 5 HOH A 23 323 90 HOH HOH . 
L 5 HOH A 24 324 91 HOH HOH . 
L 5 HOH A 25 325 101 HOH HOH . 
L 5 HOH A 26 326 102 HOH HOH . 
L 5 HOH A 27 327 103 HOH HOH . 
L 5 HOH A 28 328 104 HOH HOH . 
L 5 HOH A 29 329 105 HOH HOH . 
L 5 HOH A 30 330 106 HOH HOH . 
L 5 HOH A 31 331 115 HOH HOH . 
L 5 HOH A 32 332 116 HOH HOH . 
L 5 HOH A 33 333 117 HOH HOH . 
L 5 HOH A 34 334 118 HOH HOH . 
L 5 HOH A 35 335 119 HOH HOH . 
L 5 HOH A 36 336 120 HOH HOH . 
L 5 HOH A 37 337 121 HOH HOH . 
L 5 HOH A 38 338 122 HOH HOH . 
L 5 HOH A 39 339 123 HOH HOH . 
L 5 HOH A 40 340 124 HOH HOH . 
L 5 HOH A 41 341 135 HOH HOH . 
L 5 HOH A 42 342 136 HOH HOH . 
M 5 HOH B 1 201 1 HOH HOH . 
M 5 HOH B 2 202 2 HOH HOH . 
M 5 HOH B 3 203 3 HOH HOH . 
M 5 HOH B 4 204 6 HOH HOH . 
M 5 HOH B 5 205 8 HOH HOH . 
M 5 HOH B 6 206 10 HOH HOH . 
M 5 HOH B 7 207 11 HOH HOH . 
M 5 HOH B 8 208 15 HOH HOH . 
M 5 HOH B 9 209 18 HOH HOH . 
M 5 HOH B 10 210 20 HOH HOH . 
M 5 HOH B 11 211 21 HOH HOH . 
M 5 HOH B 12 212 26 HOH HOH . 
M 5 HOH B 13 213 29 HOH HOH . 
M 5 HOH B 14 214 33 HOH HOH . 
M 5 HOH B 15 215 34 HOH HOH . 
M 5 HOH B 16 216 35 HOH HOH . 
M 5 HOH B 17 217 36 HOH HOH . 
M 5 HOH B 18 218 39 HOH HOH . 
M 5 HOH B 19 219 44 HOH HOH . 
M 5 HOH B 20 220 49 HOH HOH . 
M 5 HOH B 21 221 54 HOH HOH . 
M 5 HOH B 22 222 55 HOH HOH . 
M 5 HOH B 23 223 58 HOH HOH . 
M 5 HOH B 24 224 60 HOH HOH . 
M 5 HOH B 25 225 64 HOH HOH . 
M 5 HOH B 26 226 72 HOH HOH . 
M 5 HOH B 27 227 73 HOH HOH . 
M 5 HOH B 28 228 75 HOH HOH . 
M 5 HOH B 29 229 77 HOH HOH . 
M 5 HOH B 30 230 80 HOH HOH . 
M 5 HOH B 31 231 81 HOH HOH . 
M 5 HOH B 32 232 82 HOH HOH . 
M 5 HOH B 33 233 92 HOH HOH . 
M 5 HOH B 34 234 93 HOH HOH . 
M 5 HOH B 35 235 95 HOH HOH . 
M 5 HOH B 36 236 107 HOH HOH . 
M 5 HOH B 37 237 108 HOH HOH . 
M 5 HOH B 38 238 114 HOH HOH . 
M 5 HOH B 39 239 125 HOH HOH . 
M 5 HOH B 40 240 126 HOH HOH . 
M 5 HOH B 41 241 127 HOH HOH . 
M 5 HOH B 42 242 128 HOH HOH . 
M 5 HOH B 43 243 133 HOH HOH . 
N 5 HOH C 1 301 4 HOH HOH . 
N 5 HOH C 2 302 5 HOH HOH . 
N 5 HOH C 3 303 16 HOH HOH . 
N 5 HOH C 4 304 22 HOH HOH . 
N 5 HOH C 5 305 31 HOH HOH . 
N 5 HOH C 6 306 32 HOH HOH . 
N 5 HOH C 7 307 37 HOH HOH . 
N 5 HOH C 8 308 45 HOH HOH . 
N 5 HOH C 9 309 46 HOH HOH . 
N 5 HOH C 10 310 47 HOH HOH . 
N 5 HOH C 11 311 52 HOH HOH . 
N 5 HOH C 12 312 53 HOH HOH . 
N 5 HOH C 13 313 66 HOH HOH . 
N 5 HOH C 14 314 68 HOH HOH . 
N 5 HOH C 15 315 70 HOH HOH . 
N 5 HOH C 16 316 78 HOH HOH . 
N 5 HOH C 17 317 83 HOH HOH . 
N 5 HOH C 18 318 87 HOH HOH . 
N 5 HOH C 19 319 89 HOH HOH . 
N 5 HOH C 20 320 97 HOH HOH . 
N 5 HOH C 21 321 109 HOH HOH . 
N 5 HOH C 22 322 110 HOH HOH . 
N 5 HOH C 23 323 111 HOH HOH . 
N 5 HOH C 24 324 112 HOH HOH . 
N 5 HOH C 25 325 129 HOH HOH . 
N 5 HOH C 26 326 130 HOH HOH . 
N 5 HOH C 27 327 131 HOH HOH . 
N 5 HOH C 28 328 134 HOH HOH . 
O 5 HOH D 1 201 9 HOH HOH . 
O 5 HOH D 2 202 17 HOH HOH . 
O 5 HOH D 3 203 19 HOH HOH . 
O 5 HOH D 4 204 40 HOH HOH . 
O 5 HOH D 5 205 48 HOH HOH . 
O 5 HOH D 6 206 51 HOH HOH . 
O 5 HOH D 7 207 57 HOH HOH . 
O 5 HOH D 8 208 59 HOH HOH . 
O 5 HOH D 9 209 61 HOH HOH . 
O 5 HOH D 10 210 63 HOH HOH . 
O 5 HOH D 11 211 65 HOH HOH . 
O 5 HOH D 12 212 67 HOH HOH . 
O 5 HOH D 13 213 69 HOH HOH . 
O 5 HOH D 14 214 71 HOH HOH . 
O 5 HOH D 15 215 86 HOH HOH . 
O 5 HOH D 16 216 94 HOH HOH . 
O 5 HOH D 17 217 96 HOH HOH . 
O 5 HOH D 18 218 98 HOH HOH . 
O 5 HOH D 19 219 99 HOH HOH . 
O 5 HOH D 20 220 100 HOH HOH . 
O 5 HOH D 21 221 113 HOH HOH . 
O 5 HOH D 22 222 132 HOH HOH . 
O 5 HOH D 23 223 137 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               45.976 
_atom_site.Cartn_y               -26.477 
_atom_site.Cartn_z               24.787 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        19.9 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           205 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           232 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#