data_3WBL # _model_server_result.job_id Qjq8gZn1tRHmXf6v703NZQ _model_server_result.datetime_utc '2024-11-21 22:17:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wbl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 3WBL # _exptl.entry_id 3WBL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 366.46 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~7~-(4-ethoxyphenyl)-6-methyl-N~5~-[(3S)-piperidin-3-yl]pyrazolo[1,5-a]pyrimidine-5,7-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3WBL _cell.length_a 53.645 _cell.length_b 72.104 _cell.length_c 72.613 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WBL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H26 N6 O' _chem_comp.formula_weight 366.46 _chem_comp.id PDY _chem_comp.mon_nstd_flag . _chem_comp.name N~7~-(4-ethoxyphenyl)-6-methyl-N~5~-[(3S)-piperidin-3-yl]pyrazolo[1,5-a]pyrimidine-5,7-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms {5-[((3S)(3-piperidyl))amino]-6-methyl(pyrazolo[1,5-a]pyrimidin-7-yl)}(4-ethoxyphenyl)amine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 C26 PDY sing 243 n n C25 C15 PDY sing 244 n n C26 C23 PDY sing 245 n n C23 N12 PDY sing 246 n n N12 C22 PDY sing 247 n n C22 C15 PDY sing 248 n n C15 N10 PDY sing 249 n n N10 C4 PDY sing 250 n n C4 C3 PDY sing 251 n y C4 N6 PDY doub 252 n y C3 C14 PDY sing 253 n n C3 C1 PDY doub 254 n y N6 C5 PDY sing 255 n y C5 C8 PDY doub 256 n y C5 N2 PDY sing 257 n y C8 C11 PDY sing 258 n y C11 N7 PDY doub 259 n y N7 N2 PDY sing 260 n y N2 C1 PDY sing 261 n y C1 N9 PDY sing 262 n n N9 C13 PDY sing 263 n n C13 C17 PDY doub 264 n y C13 C18 PDY sing 265 n y C17 C20 PDY sing 266 n y C20 C16 PDY doub 267 n y C18 C19 PDY doub 268 n y C19 C16 PDY sing 269 n y C16 O21 PDY sing 270 n n O21 C24 PDY sing 271 n n C24 C27 PDY sing 272 n n C25 H25 PDY sing 273 n n C25 H25A PDY sing 274 n n C26 H26 PDY sing 275 n n C26 H26A PDY sing 276 n n C23 H23 PDY sing 277 n n C23 H23A PDY sing 278 n n N12 HN12 PDY sing 279 n n C22 H22 PDY sing 280 n n C22 H22A PDY sing 281 n n C15 H15 PDY sing 282 n n N10 HN10 PDY sing 283 n n C14 H14 PDY sing 284 n n C14 H14A PDY sing 285 n n C14 H14B PDY sing 286 n n C8 H8 PDY sing 287 n n C11 H11 PDY sing 288 n n N9 HN9 PDY sing 289 n n C17 H17 PDY sing 290 n n C20 H20 PDY sing 291 n n C18 H18 PDY sing 292 n n C19 H19 PDY sing 293 n n C24 H24 PDY sing 294 n n C24 H24A PDY sing 295 n n C27 H27 PDY sing 296 n n C27 H27A PDY sing 297 n n C27 H27B PDY sing 298 n n # _atom_sites.entry_id 3WBL _atom_sites.fract_transf_matrix[1][1] 0.018641 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013869 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013772 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 301 1 ACT ACT . C 3 PDY A 1 302 1 PDY PDY . D 4 HOH A 1 401 1 HOH HOH . D 4 HOH A 2 402 2 HOH HOH . D 4 HOH A 3 403 3 HOH HOH . D 4 HOH A 4 404 4 HOH HOH . D 4 HOH A 5 405 5 HOH HOH . D 4 HOH A 6 406 6 HOH HOH . D 4 HOH A 7 407 7 HOH HOH . D 4 HOH A 8 408 8 HOH HOH . D 4 HOH A 9 409 9 HOH HOH . D 4 HOH A 10 410 10 HOH HOH . D 4 HOH A 11 411 11 HOH HOH . D 4 HOH A 12 412 12 HOH HOH . D 4 HOH A 13 413 13 HOH HOH . D 4 HOH A 14 414 14 HOH HOH . D 4 HOH A 15 415 15 HOH HOH . D 4 HOH A 16 416 16 HOH HOH . D 4 HOH A 17 417 17 HOH HOH . D 4 HOH A 18 418 18 HOH HOH . D 4 HOH A 19 419 19 HOH HOH . D 4 HOH A 20 420 20 HOH HOH . D 4 HOH A 21 421 21 HOH HOH . D 4 HOH A 22 422 22 HOH HOH . D 4 HOH A 23 423 23 HOH HOH . D 4 HOH A 24 424 24 HOH HOH . D 4 HOH A 25 425 25 HOH HOH . D 4 HOH A 26 426 26 HOH HOH . D 4 HOH A 27 427 27 HOH HOH . D 4 HOH A 28 428 28 HOH HOH . D 4 HOH A 29 429 29 HOH HOH . D 4 HOH A 30 430 30 HOH HOH . D 4 HOH A 31 431 31 HOH HOH . D 4 HOH A 32 432 32 HOH HOH . D 4 HOH A 33 433 33 HOH HOH . D 4 HOH A 34 434 34 HOH HOH . D 4 HOH A 35 435 35 HOH HOH . D 4 HOH A 36 436 36 HOH HOH . D 4 HOH A 37 437 37 HOH HOH . D 4 HOH A 38 438 38 HOH HOH . D 4 HOH A 39 439 39 HOH HOH . D 4 HOH A 40 440 40 HOH HOH . D 4 HOH A 41 441 41 HOH HOH . D 4 HOH A 42 442 42 HOH HOH . D 4 HOH A 43 443 43 HOH HOH . D 4 HOH A 44 444 44 HOH HOH . D 4 HOH A 45 445 45 HOH HOH . D 4 HOH A 46 446 46 HOH HOH . D 4 HOH A 47 447 47 HOH HOH . D 4 HOH A 48 448 48 HOH HOH . D 4 HOH A 49 449 49 HOH HOH . D 4 HOH A 50 450 50 HOH HOH . D 4 HOH A 51 451 51 HOH HOH . D 4 HOH A 52 452 52 HOH HOH . D 4 HOH A 53 453 53 HOH HOH . D 4 HOH A 54 454 54 HOH HOH . D 4 HOH A 55 455 55 HOH HOH . D 4 HOH A 56 456 56 HOH HOH . D 4 HOH A 57 457 57 HOH HOH . D 4 HOH A 58 458 58 HOH HOH . D 4 HOH A 59 459 59 HOH HOH . D 4 HOH A 60 460 60 HOH HOH . D 4 HOH A 61 461 62 HOH HOH . D 4 HOH A 62 462 63 HOH HOH . D 4 HOH A 63 463 64 HOH HOH . D 4 HOH A 64 464 65 HOH HOH . D 4 HOH A 65 465 67 HOH HOH . D 4 HOH A 66 466 68 HOH HOH . D 4 HOH A 67 467 69 HOH HOH . D 4 HOH A 68 468 70 HOH HOH . D 4 HOH A 69 469 71 HOH HOH . D 4 HOH A 70 470 72 HOH HOH . D 4 HOH A 71 471 76 HOH HOH . D 4 HOH A 72 472 77 HOH HOH . D 4 HOH A 73 473 78 HOH HOH . D 4 HOH A 74 474 79 HOH HOH . D 4 HOH A 75 475 80 HOH HOH . D 4 HOH A 76 476 81 HOH HOH . D 4 HOH A 77 477 82 HOH HOH . D 4 HOH A 78 478 83 HOH HOH . D 4 HOH A 79 479 84 HOH HOH . D 4 HOH A 80 480 85 HOH HOH . D 4 HOH A 81 481 87 HOH HOH . D 4 HOH A 82 482 88 HOH HOH . D 4 HOH A 83 483 89 HOH HOH . D 4 HOH A 84 484 90 HOH HOH . D 4 HOH A 85 485 91 HOH HOH . D 4 HOH A 86 486 93 HOH HOH . D 4 HOH A 87 487 94 HOH HOH . D 4 HOH A 88 488 95 HOH HOH . D 4 HOH A 89 489 96 HOH HOH . D 4 HOH A 90 490 97 HOH HOH . D 4 HOH A 91 491 98 HOH HOH . D 4 HOH A 92 492 99 HOH HOH . D 4 HOH A 93 493 100 HOH HOH . D 4 HOH A 94 494 101 HOH HOH . D 4 HOH A 95 495 103 HOH HOH . D 4 HOH A 96 496 108 HOH HOH . D 4 HOH A 97 497 109 HOH HOH . D 4 HOH A 98 498 110 HOH HOH . D 4 HOH A 99 499 111 HOH HOH . D 4 HOH A 100 500 112 HOH HOH . D 4 HOH A 101 501 113 HOH HOH . D 4 HOH A 102 502 114 HOH HOH . D 4 HOH A 103 503 115 HOH HOH . D 4 HOH A 104 504 116 HOH HOH . D 4 HOH A 105 505 117 HOH HOH . D 4 HOH A 106 506 118 HOH HOH . D 4 HOH A 107 507 119 HOH HOH . D 4 HOH A 108 508 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C25 PDY . . . C 3 25.12 62.039 11.004 1 36.04 ? C25 PDY 302 A 1 HETATM 2 C C26 PDY . . . C 3 24.141 62.004 12.177 1 37.01 ? C26 PDY 302 A 1 HETATM 3 C C23 PDY . . . C 3 24.744 62.72 13.397 1 38.12 ? C23 PDY 302 A 1 HETATM 4 N N12 PDY . . . C 3 25.324 64.027 13.068 1 34.81 ? N12 PDY 302 A 1 HETATM 5 C C22 PDY . . . C 3 26.152 64.212 11.885 1 35.4 ? C22 PDY 302 A 1 HETATM 6 C C15 PDY . . . C 3 25.575 63.466 10.661 1 36.66 ? C15 PDY 302 A 1 HETATM 7 N N10 PDY . . . C 3 26.534 63.384 9.56 1 36.29 ? N10 PDY 302 A 1 HETATM 8 C C4 PDY . . . C 3 27.109 64.467 8.941 1 35.99 ? C4 PDY 302 A 1 HETATM 9 C C3 PDY . . . C 3 28.335 64.224 8.105 1 35.74 ? C3 PDY 302 A 1 HETATM 10 C C14 PDY . . . C 3 28.88 62.813 7.994 1 34.06 ? C14 PDY 302 A 1 HETATM 11 N N6 PDY . . . C 3 26.603 65.74 9.067 1 34.41 ? N6 PDY 302 A 1 HETATM 12 C C5 PDY . . . C 3 27.196 66.783 8.411 1 34.89 ? C5 PDY 302 A 1 HETATM 13 C C8 PDY . . . C 3 26.774 68.157 8.373 1 33.76 ? C8 PDY 302 A 1 HETATM 14 C C11 PDY . . . C 3 27.736 68.758 7.549 1 33.53 ? C11 PDY 302 A 1 HETATM 15 N N7 PDY . . . C 3 28.687 67.869 7.062 1 32.82 ? N7 PDY 302 A 1 HETATM 16 N N2 PDY . . . C 3 28.339 66.644 7.612 1 35.73 ? N2 PDY 302 A 1 HETATM 17 C C1 PDY . . . C 3 28.988 65.397 7.427 1 35.37 ? C1 PDY 302 A 1 HETATM 18 N N9 PDY . . . C 3 30.103 65.348 6.65 1 36.81 ? N9 PDY 302 A 1 HETATM 19 C C13 PDY . . . C 3 31.072 64.39 6.678 1 38.19 ? C13 PDY 302 A 1 HETATM 20 C C17 PDY . . . C 3 31.63 63.896 7.877 1 37.16 ? C17 PDY 302 A 1 HETATM 21 C C20 PDY . . . C 3 32.615 62.895 7.824 1 38.39 ? C20 PDY 302 A 1 HETATM 22 C C18 PDY . . . C 3 31.508 63.892 5.446 1 36.69 ? C18 PDY 302 A 1 HETATM 23 C C19 PDY . . . C 3 32.489 62.907 5.395 1 38.93 ? C19 PDY 302 A 1 HETATM 24 C C16 PDY . . . C 3 33.057 62.405 6.581 1 39.26 ? C16 PDY 302 A 1 HETATM 25 O O21 PDY . . . C 3 34.031 61.418 6.534 1 40.64 ? O21 PDY 302 A 1 HETATM 26 C C24 PDY . . . C 3 34.823 61.122 5.372 1 42.75 ? C24 PDY 302 A 1 HETATM 27 C C27 PDY . . . C 3 36.215 61.726 5.502 1 43.84 ? C27 PDY 302 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 27 #