data_3WC8 # _model_server_result.job_id mH_Q81feHwAsPbbRxaVjCA _model_server_result.datetime_utc '2024-11-08 11:36:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wc8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 3WC8 # _exptl.entry_id 3WC8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3WC8 _cell.length_a 60.815 _cell.length_b 93.476 _cell.length_c 36.241 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WC8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 14 A CYS 14 1_555 B CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.695 ? covale ? covale2 A SG CYS 17 A CYS 17 1_555 B CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.745 ? metalc ? metalc1 A NE2 HIS 18 A HIS 18 1_555 B FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc2 B FE HEC . A HEC 201 1_555 H O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 390 n n P O2 PO4 sing 391 n n P O3 PO4 sing 392 n n P O4 PO4 sing 393 n n # _atom_sites.entry_id 3WC8 _atom_sites.fract_transf_matrix[1][1] 0.016443 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 201 105 HEC HEM . C 3 PO4 A 1 202 1 PO4 PO4 . D 4 PG4 A 1 203 1 PG4 PG4 . E 5 PEG A 1 204 1 PEG PEG . F 5 PEG A 1 205 1 PEG PEG . G 5 PEG A 1 206 1 PEG PEG . H 6 HOH A 1 301 1 HOH HOH . H 6 HOH A 2 302 2 HOH HOH . H 6 HOH A 3 303 3 HOH HOH . H 6 HOH A 4 304 4 HOH HOH . H 6 HOH A 5 305 5 HOH HOH . H 6 HOH A 6 306 6 HOH HOH . H 6 HOH A 7 307 7 HOH HOH . H 6 HOH A 8 308 8 HOH HOH . H 6 HOH A 9 309 9 HOH HOH . H 6 HOH A 10 310 10 HOH HOH . H 6 HOH A 11 311 11 HOH HOH . H 6 HOH A 12 312 12 HOH HOH . H 6 HOH A 13 313 13 HOH HOH . H 6 HOH A 14 314 14 HOH HOH . H 6 HOH A 15 315 15 HOH HOH . H 6 HOH A 16 316 16 HOH HOH . H 6 HOH A 17 317 17 HOH HOH . H 6 HOH A 18 318 18 HOH HOH . H 6 HOH A 19 319 19 HOH HOH . H 6 HOH A 20 320 21 HOH HOH . H 6 HOH A 21 321 25 HOH HOH . H 6 HOH A 22 322 26 HOH HOH . H 6 HOH A 23 323 27 HOH HOH . H 6 HOH A 24 324 28 HOH HOH . H 6 HOH A 25 325 30 HOH HOH . H 6 HOH A 26 326 32 HOH HOH . H 6 HOH A 27 327 33 HOH HOH . H 6 HOH A 28 328 34 HOH HOH . H 6 HOH A 29 329 35 HOH HOH . H 6 HOH A 30 330 36 HOH HOH . H 6 HOH A 31 331 38 HOH HOH . H 6 HOH A 32 332 39 HOH HOH . H 6 HOH A 33 333 40 HOH HOH . H 6 HOH A 34 334 41 HOH HOH . H 6 HOH A 35 335 42 HOH HOH . H 6 HOH A 36 336 43 HOH HOH . H 6 HOH A 37 337 44 HOH HOH . H 6 HOH A 38 338 45 HOH HOH . H 6 HOH A 39 339 46 HOH HOH . H 6 HOH A 40 340 48 HOH HOH . H 6 HOH A 41 341 50 HOH HOH . H 6 HOH A 42 342 51 HOH HOH . H 6 HOH A 43 343 52 HOH HOH . H 6 HOH A 44 344 53 HOH HOH . H 6 HOH A 45 345 55 HOH HOH . H 6 HOH A 46 346 56 HOH HOH . H 6 HOH A 47 347 57 HOH HOH . H 6 HOH A 48 348 58 HOH HOH . H 6 HOH A 49 349 59 HOH HOH . H 6 HOH A 50 350 60 HOH HOH . H 6 HOH A 51 351 61 HOH HOH . H 6 HOH A 52 352 62 HOH HOH . H 6 HOH A 53 353 64 HOH HOH . H 6 HOH A 54 354 67 HOH HOH . H 6 HOH A 55 355 69 HOH HOH . H 6 HOH A 56 356 70 HOH HOH . H 6 HOH A 57 357 71 HOH HOH . H 6 HOH A 58 358 73 HOH HOH . H 6 HOH A 59 359 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 0.001 -16.49 -9.062 0.5 18.72 ? P PO4 202 A 1 HETATM 2 O O1 PO4 . . . C 3 0.748 -15.674 -10.042 0.5 18.54 ? O1 PO4 202 A 1 HETATM 3 O O2 PO4 . . . C 3 0.956 -17.415 -8.271 0.5 19.32 ? O2 PO4 202 A 1 HETATM 4 O O3 PO4 . . . C 3 -0.954 -17.415 -9.854 0.5 19.3 ? O3 PO4 202 A 1 HETATM 5 O O4 PO4 . . . C 3 -0.748 -15.676 -8.079 0.5 18.51 ? O4 PO4 202 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 5 #