data_3WC8
#
_model_server_result.job_id            1DrQVjtHRVH3YJkJsG2ouQ 
_model_server_result.datetime_utc      '2024-12-03 07:57:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3wc8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":206}' 
#
_entry.id    3WC8 
#
_exptl.entry_id    3WC8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3WC8 
_cell.length_a            60.815 
_cell.length_b            93.476 
_cell.length_c            36.241 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3WC8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 14 A CYS 14 1_555 B CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.695 ? 
covale ? covale2 A SG CYS 17 A CYS 17 1_555 B CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.745 ? 
metalc ? metalc1 A NE2 HIS 18 A HIS 18 1_555 B FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? 
metalc ? metalc2 B FE HEC . A HEC 201 1_555 H O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 321 n n 
C1 C2 PEG sing 322 n n 
C1 H11 PEG sing 323 n n 
C1 H12 PEG sing 324 n n 
O1 HO1 PEG sing 325 n n 
C2 O2 PEG sing 326 n n 
C2 H21 PEG sing 327 n n 
C2 H22 PEG sing 328 n n 
O2 C3 PEG sing 329 n n 
C3 C4 PEG sing 330 n n 
C3 H31 PEG sing 331 n n 
C3 H32 PEG sing 332 n n 
C4 O4 PEG sing 333 n n 
C4 H41 PEG sing 334 n n 
C4 H42 PEG sing 335 n n 
O4 HO4 PEG sing 336 n n 
#
_atom_sites.entry_id                     3WC8 
_atom_sites.fract_transf_matrix[1][1]    0.016443 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010698 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.027593 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEC A 1 201 105 HEC HEM . 
C 3 PO4 A 1 202 1 PO4 PO4 . 
D 4 PG4 A 1 203 1 PG4 PG4 . 
E 5 PEG A 1 204 1 PEG PEG . 
F 5 PEG A 1 205 1 PEG PEG . 
G 5 PEG A 1 206 1 PEG PEG . 
H 6 HOH A 1 301 1 HOH HOH . 
H 6 HOH A 2 302 2 HOH HOH . 
H 6 HOH A 3 303 3 HOH HOH . 
H 6 HOH A 4 304 4 HOH HOH . 
H 6 HOH A 5 305 5 HOH HOH . 
H 6 HOH A 6 306 6 HOH HOH . 
H 6 HOH A 7 307 7 HOH HOH . 
H 6 HOH A 8 308 8 HOH HOH . 
H 6 HOH A 9 309 9 HOH HOH . 
H 6 HOH A 10 310 10 HOH HOH . 
H 6 HOH A 11 311 11 HOH HOH . 
H 6 HOH A 12 312 12 HOH HOH . 
H 6 HOH A 13 313 13 HOH HOH . 
H 6 HOH A 14 314 14 HOH HOH . 
H 6 HOH A 15 315 15 HOH HOH . 
H 6 HOH A 16 316 16 HOH HOH . 
H 6 HOH A 17 317 17 HOH HOH . 
H 6 HOH A 18 318 18 HOH HOH . 
H 6 HOH A 19 319 19 HOH HOH . 
H 6 HOH A 20 320 21 HOH HOH . 
H 6 HOH A 21 321 25 HOH HOH . 
H 6 HOH A 22 322 26 HOH HOH . 
H 6 HOH A 23 323 27 HOH HOH . 
H 6 HOH A 24 324 28 HOH HOH . 
H 6 HOH A 25 325 30 HOH HOH . 
H 6 HOH A 26 326 32 HOH HOH . 
H 6 HOH A 27 327 33 HOH HOH . 
H 6 HOH A 28 328 34 HOH HOH . 
H 6 HOH A 29 329 35 HOH HOH . 
H 6 HOH A 30 330 36 HOH HOH . 
H 6 HOH A 31 331 38 HOH HOH . 
H 6 HOH A 32 332 39 HOH HOH . 
H 6 HOH A 33 333 40 HOH HOH . 
H 6 HOH A 34 334 41 HOH HOH . 
H 6 HOH A 35 335 42 HOH HOH . 
H 6 HOH A 36 336 43 HOH HOH . 
H 6 HOH A 37 337 44 HOH HOH . 
H 6 HOH A 38 338 45 HOH HOH . 
H 6 HOH A 39 339 46 HOH HOH . 
H 6 HOH A 40 340 48 HOH HOH . 
H 6 HOH A 41 341 50 HOH HOH . 
H 6 HOH A 42 342 51 HOH HOH . 
H 6 HOH A 43 343 52 HOH HOH . 
H 6 HOH A 44 344 53 HOH HOH . 
H 6 HOH A 45 345 55 HOH HOH . 
H 6 HOH A 46 346 56 HOH HOH . 
H 6 HOH A 47 347 57 HOH HOH . 
H 6 HOH A 48 348 58 HOH HOH . 
H 6 HOH A 49 349 59 HOH HOH . 
H 6 HOH A 50 350 60 HOH HOH . 
H 6 HOH A 51 351 61 HOH HOH . 
H 6 HOH A 52 352 62 HOH HOH . 
H 6 HOH A 53 353 64 HOH HOH . 
H 6 HOH A 54 354 67 HOH HOH . 
H 6 HOH A 55 355 69 HOH HOH . 
H 6 HOH A 56 356 70 HOH HOH . 
H 6 HOH A 57 357 71 HOH HOH . 
H 6 HOH A 58 358 73 HOH HOH . 
H 6 HOH A 59 359 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . G 5 -10.054 1.154 -1.932 0.5 32.7 ? C1 PEG 206 A 1 
HETATM 2 O O1 PEG . . . G 5 -8.907 1.661 -2.609 0.5 33.56 ? O1 PEG 206 A 1 
HETATM 3 C C2 PEG . . . G 5 -9.47 0.542 -0.685 0.5 31.73 ? C2 PEG 206 A 1 
HETATM 4 O O2 PEG . . . G 5 -10.448 -0.075 0.139 0.5 33.52 ? O2 PEG 206 A 1 
HETATM 5 C C3 PEG . . . G 5 -9.773 -1.101 0.818 0.5 34.06 ? C3 PEG 206 A 1 
HETATM 6 C C4 PEG . . . G 5 -10.021 -1.036 2.299 0.5 36.17 ? C4 PEG 206 A 1 
HETATM 7 O O4 PEG . . . G 5 -8.808 -1.476 2.912 0.5 37.78 ? O4 PEG 206 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           366 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           7 
#