data_3WEC # _model_server_result.job_id uTfCOIb4Cjf-eZTG-cbDrA _model_server_result.datetime_utc '2025-03-26 03:08:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wec # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 3WEC # _exptl.entry_id 3WEC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.535 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[(2E,6E,9R)-9-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]-2-methylquinolin-4(1H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.72 _cell.angle_gamma 90 _cell.entry_id 3WEC _cell.length_a 41.46 _cell.length_b 100.04 _cell.length_c 52.29 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WEC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 361 A CYS 361 1_555 B FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc2 B FE HEM . A HEM 501 1_555 D O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? # _chem_comp.formula 'C25 H33 N O2' _chem_comp.formula_weight 379.535 _chem_comp.id AUI _chem_comp.mon_nstd_flag . _chem_comp.name 3-[(2E,6E,9R)-9-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]-2-methylquinolin-4(1H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Dehydroxy-aurachin RE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C14 AUI sing 70 n n C12 C2 AUI sing 71 n n C14 C15 AUI doub 72 e n C11 C3 AUI sing 73 n n C24 C23 AUI sing 74 n n C27 C19 AUI sing 75 n n C22 C21 AUI sing 76 n n C22 C23 AUI doub 77 n n C17 C16 AUI sing 78 n n C17 C18 AUI sing 79 n n C16 C15 AUI sing 80 n n C2 C3 AUI doub 81 n n C2 C1 AUI sing 82 n n C21 C20 AUI sing 83 n n C21 O28 AUI sing 84 n n C23 C25 AUI sing 85 n n C15 C26 AUI sing 86 n n C19 C18 AUI doub 87 e n C19 C20 AUI sing 88 n n C3 N10 AUI sing 89 n n O13 C1 AUI doub 90 n n C1 C4 AUI sing 91 n n N10 C9 AUI sing 92 n n C4 C9 AUI doub 93 n y C4 C5 AUI sing 94 n y C9 C8 AUI sing 95 n y C5 C6 AUI doub 96 n y C8 C7 AUI doub 97 n y C6 C7 AUI sing 98 n y C5 H1 AUI sing 99 n n C6 H2 AUI sing 100 n n C7 H3 AUI sing 101 n n C8 H4 AUI sing 102 n n C11 H5 AUI sing 103 n n C11 H6 AUI sing 104 n n C11 H7 AUI sing 105 n n C12 H9 AUI sing 106 n n C12 H10 AUI sing 107 n n C14 H11 AUI sing 108 n n C26 H12 AUI sing 109 n n C26 H13 AUI sing 110 n n C26 H14 AUI sing 111 n n C16 H15 AUI sing 112 n n C16 H16 AUI sing 113 n n C17 H17 AUI sing 114 n n C17 H18 AUI sing 115 n n C18 H19 AUI sing 116 n n C27 H20 AUI sing 117 n n C27 H21 AUI sing 118 n n C27 H22 AUI sing 119 n n C20 H23 AUI sing 120 n n C20 H24 AUI sing 121 n n C21 H25 AUI sing 122 n n O28 H26 AUI sing 123 n n C22 H27 AUI sing 124 n n C24 H28 AUI sing 125 n n C24 H29 AUI sing 126 n n C24 H30 AUI sing 127 n n C25 H31 AUI sing 128 n n C25 H32 AUI sing 129 n n C25 H33 AUI sing 130 n n N10 H34 AUI sing 131 n n # _atom_sites.entry_id 3WEC _atom_sites.fract_transf_matrix[1][1] 0.02412 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008173 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009996 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020192 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 501 HEM HEM . C 3 AUI A 1 502 502 AUI AUI . D 4 HOH A 1 601 601 HOH HOH . D 4 HOH A 2 602 602 HOH HOH . D 4 HOH A 3 603 603 HOH HOH . D 4 HOH A 4 604 604 HOH HOH . D 4 HOH A 5 605 605 HOH HOH . D 4 HOH A 6 606 606 HOH HOH . D 4 HOH A 7 607 607 HOH HOH . D 4 HOH A 8 608 608 HOH HOH . D 4 HOH A 9 609 609 HOH HOH . D 4 HOH A 10 610 610 HOH HOH . D 4 HOH A 11 611 611 HOH HOH . D 4 HOH A 12 612 612 HOH HOH . D 4 HOH A 13 613 613 HOH HOH . D 4 HOH A 14 614 614 HOH HOH . D 4 HOH A 15 615 615 HOH HOH . D 4 HOH A 16 616 616 HOH HOH . D 4 HOH A 17 617 617 HOH HOH . D 4 HOH A 18 618 618 HOH HOH . D 4 HOH A 19 619 619 HOH HOH . D 4 HOH A 20 620 620 HOH HOH . D 4 HOH A 21 621 621 HOH HOH . D 4 HOH A 22 622 622 HOH HOH . D 4 HOH A 23 623 623 HOH HOH . D 4 HOH A 24 624 624 HOH HOH . D 4 HOH A 25 625 625 HOH HOH . D 4 HOH A 26 626 626 HOH HOH . D 4 HOH A 27 627 627 HOH HOH . D 4 HOH A 28 628 628 HOH HOH . D 4 HOH A 29 629 629 HOH HOH . D 4 HOH A 30 630 630 HOH HOH . D 4 HOH A 31 631 631 HOH HOH . D 4 HOH A 32 632 632 HOH HOH . D 4 HOH A 33 633 633 HOH HOH . D 4 HOH A 34 634 634 HOH HOH . D 4 HOH A 35 635 635 HOH HOH . D 4 HOH A 36 636 636 HOH HOH . D 4 HOH A 37 637 637 HOH HOH . D 4 HOH A 38 638 638 HOH HOH . D 4 HOH A 39 639 639 HOH HOH . D 4 HOH A 40 640 640 HOH HOH . D 4 HOH A 41 641 641 HOH HOH . D 4 HOH A 42 642 642 HOH HOH . D 4 HOH A 43 643 643 HOH HOH . D 4 HOH A 44 644 644 HOH HOH . D 4 HOH A 45 645 645 HOH HOH . D 4 HOH A 46 646 646 HOH HOH . D 4 HOH A 47 647 647 HOH HOH . D 4 HOH A 48 648 648 HOH HOH . D 4 HOH A 49 649 649 HOH HOH . D 4 HOH A 50 650 650 HOH HOH . D 4 HOH A 51 651 651 HOH HOH . D 4 HOH A 52 652 652 HOH HOH . D 4 HOH A 53 653 653 HOH HOH . D 4 HOH A 54 654 654 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O13 AUI . . . C 3 5.4 7.6 18.677 1 35.43 ? O13 AUI 502 A 1 HETATM 2 C C1 AUI . . . C 3 5.07 6.4 18.821 1 35.28 ? C1 AUI 502 A 1 HETATM 3 C C4 AUI . . . C 3 5.648 5.635 19.942 1 34.2 ? C4 AUI 502 A 1 HETATM 4 C C5 AUI . . . C 3 6.525 6.239 20.838 1 32.99 ? C5 AUI 502 A 1 HETATM 5 C C6 AUI . . . C 3 7.047 5.506 21.903 1 34.19 ? C6 AUI 502 A 1 HETATM 6 C C7 AUI . . . C 3 6.637 4.172 22.037 1 35.55 ? C7 AUI 502 A 1 HETATM 7 C C8 AUI . . . C 3 5.752 3.529 21.169 1 31.29 ? C8 AUI 502 A 1 HETATM 8 C C9 AUI . . . C 3 5.21 4.218 20.095 1 35.25 ? C9 AUI 502 A 1 HETATM 9 N N10 AUI . . . C 3 4.311 3.63 19.247 1 32.21 ? N10 AUI 502 A 1 HETATM 10 C C3 AUI . . . C 3 3.755 4.261 18.192 1 36.76 ? C3 AUI 502 A 1 HETATM 11 C C11 AUI . . . C 3 2.769 3.546 17.281 1 31.93 ? C11 AUI 502 A 1 HETATM 12 C C2 AUI . . . C 3 4.106 5.694 17.915 1 38.74 ? C2 AUI 502 A 1 HETATM 13 C C12 AUI . . . C 3 3.473 6.415 16.755 1 35.85 ? C12 AUI 502 A 1 HETATM 14 C C14 AUI . . . C 3 1.977 6.583 17.042 1 42.56 ? C14 AUI 502 A 1 HETATM 15 C C15 AUI . . . C 3 1.241 7.087 18.068 1 42.98 ? C15 AUI 502 A 1 HETATM 16 C C26 AUI . . . C 3 1.775 7.662 19.366 1 48.29 ? C26 AUI 502 A 1 HETATM 17 C C16 AUI . . . C 3 -0.249 7.002 17.852 1 43.44 ? C16 AUI 502 A 1 HETATM 18 C C17 AUI . . . C 3 -1.027 8.315 17.79 1 50.86 ? C17 AUI 502 A 1 HETATM 19 C C18 AUI . . . C 3 -0.272 9.489 18.349 1 49.58 ? C18 AUI 502 A 1 HETATM 20 C C19 AUI . . . C 3 -0.59 10.792 18.183 1 52.69 ? C19 AUI 502 A 1 HETATM 21 C C27 AUI . . . C 3 -1.803 11.297 17.442 1 51.74 ? C27 AUI 502 A 1 HETATM 22 C C20 AUI . . . C 3 0.306 11.808 18.846 1 49.21 ? C20 AUI 502 A 1 HETATM 23 C C21 AUI . . . C 3 1.545 12.223 18.044 1 47.32 ? C21 AUI 502 A 1 HETATM 24 O O28 AUI . . . C 3 2.356 12.97 18.942 1 43.45 ? O28 AUI 502 A 1 HETATM 25 C C22 AUI . . . C 3 2.436 11.106 17.541 1 45.17 ? C22 AUI 502 A 1 HETATM 26 C C23 AUI . . . C 3 3.619 10.682 18.067 1 47.49 ? C23 AUI 502 A 1 HETATM 27 C C24 AUI . . . C 3 4.311 9.581 17.34 1 43.02 ? C24 AUI 502 A 1 HETATM 28 C C25 AUI . . . C 3 4.328 11.179 19.318 1 49.35 ? C25 AUI 502 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #