data_3WEN # _model_server_result.job_id b_ARWuCJUW0Uev73VlvYfQ _model_server_result.datetime_utc '2024-11-15 05:39:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wen # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1009}' # _entry.id 3WEN # _exptl.entry_id 3WEN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3WEN _cell.length_a 97.352 _cell.length_b 138.872 _cell.length_c 148.976 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WEN _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 FUC NAG C1 O1 . O3 HO3 . sing 2 ? 2 3 1 NAG NAG C1 O1 . O4 HO4 . sing 3 ? 3 2 1 GLC GLC C1 O1 . O4 HO4 . sing 4 ? 3 3 2 GLC GLC C1 O1 . O4 HO4 . sing 5 ? 3 4 3 GLC GLC C1 O1 . O4 HO4 . sing 6 ? 3 5 4 GLC GLC C1 O1 . O4 HO4 . sing 7 ? 3 6 5 AC1 GLC C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG C 1 NAG 2 n B FUC 2 B 2 FUC C 2 FUC 2 n B NAG 3 B 3 NAG C 3 NAG 3 n C GLC 1 C 1 GLC B 4 GLC 3 n C GLC 2 C 2 GLC B 3 GLC 3 n C GLC 3 C 3 GLC B 2 GLC 3 n C GLC 4 C 4 GLC B 1 ACR 3 n C GLC 5 C 5 GLC B 1 ACR 3 n C AC1 6 C 6 AC1 B 1 ACR # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 599 A CYS 599 1_555 A SG CYS 610 A CYS 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale1 A ND2 ASN 404 A ASN 404 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale2 A ND2 ASN 728 A ASN 728 1_555 D C1 NAG . A NAG 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale3 A ND2 ASN 823 A ASN 823 1_555 F C1 NAG . A NAG 1010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale4 B O3 NAG . B NAG 1 1_555 B C1 FUC . B FUC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale5 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale6 C O4 GLC . C GLC 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 sing covale ? covale7 C O4 GLC . C GLC 2 1_555 C C1 GLC . C GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 sing covale ? covale8 C O4 GLC . C GLC 3 1_555 C C1 GLC . C GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 sing covale ? covale9 C O4 GLC . C GLC 4 1_555 C C1 GLC . C GLC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 sing covale ? covale10 C O4 GLC . C GLC 5 1_555 C C1 AC1 . C AC1 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 sing # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 413 n n S O2 SO4 doub 414 n n S O3 SO4 sing 415 n n S O4 SO4 sing 416 n n # _atom_sites.entry_id 3WEN _atom_sites.fract_transf_matrix[1][1] 0.010272 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007201 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006712 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG A 1 1008 1 NAG NAG . E 5 SO4 A 1 1009 1 SO4 SO4 . F 4 NAG A 1 1010 1 NAG NAG . G 6 HOH A 1 1101 2 HOH HOH . G 6 HOH A 2 1102 3 HOH HOH . G 6 HOH A 3 1103 5 HOH HOH . G 6 HOH A 4 1104 6 HOH HOH . G 6 HOH A 5 1105 7 HOH HOH . G 6 HOH A 6 1106 8 HOH HOH . G 6 HOH A 7 1107 9 HOH HOH . G 6 HOH A 8 1108 11 HOH HOH . G 6 HOH A 9 1109 12 HOH HOH . G 6 HOH A 10 1110 13 HOH HOH . G 6 HOH A 11 1111 14 HOH HOH . G 6 HOH A 12 1112 15 HOH HOH . G 6 HOH A 13 1113 16 HOH HOH . G 6 HOH A 14 1114 18 HOH HOH . G 6 HOH A 15 1115 19 HOH HOH . G 6 HOH A 16 1116 20 HOH HOH . G 6 HOH A 17 1117 21 HOH HOH . G 6 HOH A 18 1118 23 HOH HOH . G 6 HOH A 19 1119 24 HOH HOH . G 6 HOH A 20 1120 25 HOH HOH . G 6 HOH A 21 1121 26 HOH HOH . G 6 HOH A 22 1122 28 HOH HOH . G 6 HOH A 23 1123 29 HOH HOH . G 6 HOH A 24 1124 30 HOH HOH . G 6 HOH A 25 1125 31 HOH HOH . G 6 HOH A 26 1126 32 HOH HOH . G 6 HOH A 27 1127 33 HOH HOH . G 6 HOH A 28 1128 34 HOH HOH . G 6 HOH A 29 1129 35 HOH HOH . G 6 HOH A 30 1130 36 HOH HOH . G 6 HOH A 31 1131 37 HOH HOH . G 6 HOH A 32 1132 38 HOH HOH . G 6 HOH A 33 1133 40 HOH HOH . G 6 HOH A 34 1134 41 HOH HOH . G 6 HOH A 35 1135 42 HOH HOH . G 6 HOH A 36 1136 45 HOH HOH . G 6 HOH A 37 1137 46 HOH HOH . G 6 HOH A 38 1138 47 HOH HOH . G 6 HOH A 39 1139 48 HOH HOH . G 6 HOH A 40 1140 49 HOH HOH . G 6 HOH A 41 1141 50 HOH HOH . G 6 HOH A 42 1142 52 HOH HOH . G 6 HOH A 43 1143 53 HOH HOH . G 6 HOH A 44 1144 54 HOH HOH . G 6 HOH A 45 1145 55 HOH HOH . G 6 HOH A 46 1146 57 HOH HOH . G 6 HOH A 47 1147 61 HOH HOH . G 6 HOH A 48 1148 62 HOH HOH . G 6 HOH A 49 1149 67 HOH HOH . G 6 HOH A 50 1150 69 HOH HOH . G 6 HOH A 51 1151 70 HOH HOH . G 6 HOH A 52 1152 71 HOH HOH . G 6 HOH A 53 1153 72 HOH HOH . G 6 HOH A 54 1154 73 HOH HOH . G 6 HOH A 55 1155 76 HOH HOH . G 6 HOH A 56 1156 77 HOH HOH . G 6 HOH A 57 1157 78 HOH HOH . G 6 HOH A 58 1158 79 HOH HOH . G 6 HOH A 59 1159 80 HOH HOH . G 6 HOH A 60 1160 81 HOH HOH . G 6 HOH A 61 1161 83 HOH HOH . G 6 HOH A 62 1162 84 HOH HOH . G 6 HOH A 63 1163 86 HOH HOH . G 6 HOH A 64 1164 88 HOH HOH . G 6 HOH A 65 1165 89 HOH HOH . G 6 HOH A 66 1166 92 HOH HOH . G 6 HOH A 67 1167 93 HOH HOH . G 6 HOH A 68 1168 95 HOH HOH . G 6 HOH A 69 1169 98 HOH HOH . G 6 HOH A 70 1170 99 HOH HOH . G 6 HOH A 71 1171 100 HOH HOH . G 6 HOH A 72 1172 102 HOH HOH . G 6 HOH A 73 1173 103 HOH HOH . G 6 HOH A 74 1174 104 HOH HOH . G 6 HOH A 75 1175 106 HOH HOH . G 6 HOH A 76 1176 107 HOH HOH . G 6 HOH A 77 1177 111 HOH HOH . G 6 HOH A 78 1178 112 HOH HOH . G 6 HOH A 79 1179 113 HOH HOH . G 6 HOH A 80 1180 115 HOH HOH . G 6 HOH A 81 1181 116 HOH HOH . G 6 HOH A 82 1182 117 HOH HOH . G 6 HOH A 83 1183 118 HOH HOH . G 6 HOH A 84 1184 119 HOH HOH . G 6 HOH A 85 1185 120 HOH HOH . G 6 HOH A 86 1186 122 HOH HOH . G 6 HOH A 87 1187 125 HOH HOH . G 6 HOH A 88 1188 126 HOH HOH . G 6 HOH A 89 1189 128 HOH HOH . G 6 HOH A 90 1190 130 HOH HOH . G 6 HOH A 91 1191 131 HOH HOH . G 6 HOH A 92 1192 132 HOH HOH . G 6 HOH A 93 1193 135 HOH HOH . G 6 HOH A 94 1194 136 HOH HOH . G 6 HOH A 95 1195 138 HOH HOH . G 6 HOH A 96 1196 140 HOH HOH . G 6 HOH A 97 1197 141 HOH HOH . G 6 HOH A 98 1198 142 HOH HOH . G 6 HOH A 99 1199 143 HOH HOH . G 6 HOH A 100 1200 144 HOH HOH . G 6 HOH A 101 1201 146 HOH HOH . G 6 HOH A 102 1202 148 HOH HOH . G 6 HOH A 103 1203 153 HOH HOH . G 6 HOH A 104 1204 154 HOH HOH . G 6 HOH A 105 1205 155 HOH HOH . G 6 HOH A 106 1206 156 HOH HOH . G 6 HOH A 107 1207 157 HOH HOH . G 6 HOH A 108 1208 161 HOH HOH . G 6 HOH A 109 1209 165 HOH HOH . G 6 HOH A 110 1210 167 HOH HOH . G 6 HOH A 111 1211 174 HOH HOH . G 6 HOH A 112 1212 176 HOH HOH . G 6 HOH A 113 1213 177 HOH HOH . G 6 HOH A 114 1214 178 HOH HOH . G 6 HOH A 115 1215 179 HOH HOH . G 6 HOH A 116 1216 181 HOH HOH . G 6 HOH A 117 1217 192 HOH HOH . G 6 HOH A 118 1218 196 HOH HOH . G 6 HOH A 119 1219 197 HOH HOH . G 6 HOH A 120 1220 198 HOH HOH . G 6 HOH A 121 1221 199 HOH HOH . G 6 HOH A 122 1222 200 HOH HOH . G 6 HOH A 123 1223 201 HOH HOH . G 6 HOH A 124 1224 202 HOH HOH . G 6 HOH A 125 1225 204 HOH HOH . G 6 HOH A 126 1226 205 HOH HOH . G 6 HOH A 127 1227 206 HOH HOH . G 6 HOH A 128 1228 207 HOH HOH . G 6 HOH A 129 1229 208 HOH HOH . G 6 HOH A 130 1230 209 HOH HOH . G 6 HOH A 131 1231 210 HOH HOH . G 6 HOH A 132 1232 211 HOH HOH . G 6 HOH A 133 1233 217 HOH HOH . G 6 HOH A 134 1234 219 HOH HOH . G 6 HOH A 135 1235 220 HOH HOH . G 6 HOH A 136 1236 222 HOH HOH . G 6 HOH A 137 1237 223 HOH HOH . G 6 HOH A 138 1238 224 HOH HOH . G 6 HOH A 139 1239 225 HOH HOH . G 6 HOH A 140 1240 228 HOH HOH . G 6 HOH A 141 1241 229 HOH HOH . G 6 HOH A 142 1242 230 HOH HOH . G 6 HOH A 143 1243 231 HOH HOH . G 6 HOH A 144 1244 232 HOH HOH . G 6 HOH A 145 1245 235 HOH HOH . G 6 HOH A 146 1246 239 HOH HOH . G 6 HOH A 147 1247 240 HOH HOH . G 6 HOH A 148 1248 242 HOH HOH . G 6 HOH A 149 1249 243 HOH HOH . G 6 HOH A 150 1250 244 HOH HOH . G 6 HOH A 151 1251 245 HOH HOH . G 6 HOH A 152 1252 246 HOH HOH . G 6 HOH A 153 1253 247 HOH HOH . G 6 HOH A 154 1254 249 HOH HOH . G 6 HOH A 155 1255 251 HOH HOH . G 6 HOH A 156 1256 254 HOH HOH . G 6 HOH A 157 1257 256 HOH HOH . G 6 HOH A 158 1258 258 HOH HOH . G 6 HOH A 159 1259 260 HOH HOH . G 6 HOH A 160 1260 261 HOH HOH . G 6 HOH A 161 1261 263 HOH HOH . G 6 HOH A 162 1262 264 HOH HOH . G 6 HOH A 163 1263 265 HOH HOH . G 6 HOH A 164 1264 269 HOH HOH . G 6 HOH A 165 1265 270 HOH HOH . G 6 HOH A 166 1266 271 HOH HOH . G 6 HOH A 167 1267 274 HOH HOH . G 6 HOH A 168 1268 275 HOH HOH . G 6 HOH A 169 1269 277 HOH HOH . G 6 HOH A 170 1270 281 HOH HOH . G 6 HOH A 171 1271 282 HOH HOH . G 6 HOH A 172 1272 283 HOH HOH . G 6 HOH A 173 1273 288 HOH HOH . G 6 HOH A 174 1274 289 HOH HOH . G 6 HOH A 175 1275 290 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 5 7.023 10.428 31.291 1 48.13 ? S SO4 1009 A 1 HETATM 2 O O1 SO4 . . . E 5 7.148 9.2 32.075 1 48.11 ? O1 SO4 1009 A 1 HETATM 3 O O2 SO4 . . . E 5 5.897 10.298 30.372 1 48.13 ? O2 SO4 1009 A 1 HETATM 4 O O3 SO4 . . . E 5 6.797 11.564 32.184 1 48.07 ? O3 SO4 1009 A 1 HETATM 5 O O4 SO4 . . . E 5 8.256 10.645 30.535 1 48.11 ? O4 SO4 1009 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 56 _model_server_stats.query_time_ms 1252 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #