data_3WFB # _model_server_result.job_id oc5Xxdv6ItZ3X_oDUbOzdg _model_server_result.datetime_utc '2024-11-13 11:40:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wfb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":803}' # _entry.id 3WFB # _exptl.entry_id 3WFB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3WFB _cell.length_a 90.763 _cell.length_b 110.644 _cell.length_c 193.546 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WFB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf2 A SG CYS 134 L CYS 134 1_555 A SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf4 B SG CYS 151 H CYS 151 1_555 B SG CYS 206 H CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? covale ? covale1 D SG CYS 61 C CYS 61 1_555 J CAB HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? covale ? covale2 D SG CYS 64 C CYS 64 1_555 J CAC HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc1 C NE2 HIS 60 B HIS 60 1_555 E FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc2 C OE1 GLU 135 B GLU 135 1_555 I CA CA . B CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc3 C OE2 GLU 135 B GLU 135 1_555 I CA CA . B CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? metalc ? metalc4 C ND1 HIS 207 B HIS 207 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc5 C OE1 GLU 211 B GLU 211 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc6 C OE2 GLU 211 B GLU 211 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc7 C NE2 HIS 258 B HIS 258 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc8 C NE2 HIS 259 B HIS 259 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc9 C NE2 HIS 347 B HIS 347 1_555 F FE HEM . B HEM 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc10 C NE2 HIS 349 B HIS 349 1_555 E FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc11 E O2D HEM . B HEM 801 1_555 I CA CA . B CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? metalc ? metalc12 F O2A HEM . B HEM 802 1_555 I CA CA . B CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc13 I CA CA . B CA 805 1_555 D O GLY 71 C GLY 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc14 I CA CA . B CA 805 1_555 D OH TYR 73 C TYR 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc15 I CA CA . B CA 805 1_555 N O HOH . C HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc16 D NE2 HIS 65 C HIS 65 1_555 J FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc17 D SD MET 112 C MET 112 1_555 J FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3WFB _atom_sites.fract_transf_matrix[1][1] 0.011018 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009038 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005167 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 HEM B 1 801 801 HEM HEM . F 5 HEM B 1 802 802 HEM HEM . G 6 FE B 1 803 803 FE FE . H 7 CL B 1 804 804 CL CL . I 8 CA B 1 805 805 CA CA . J 9 HEC C 1 201 201 HEC HEC . K 10 HOH L 1 301 301 HOH HOH . K 10 HOH L 2 302 302 HOH HOH . K 10 HOH L 3 303 303 HOH HOH . K 10 HOH L 4 304 304 HOH HOH . K 10 HOH L 5 305 305 HOH HOH . K 10 HOH L 6 306 306 HOH HOH . K 10 HOH L 7 307 307 HOH HOH . K 10 HOH L 8 308 308 HOH HOH . K 10 HOH L 9 309 309 HOH HOH . K 10 HOH L 10 310 310 HOH HOH . K 10 HOH L 11 311 311 HOH HOH . K 10 HOH L 12 312 313 HOH HOH . K 10 HOH L 13 313 314 HOH HOH . K 10 HOH L 14 314 315 HOH HOH . K 10 HOH L 15 315 316 HOH HOH . K 10 HOH L 16 316 317 HOH HOH . K 10 HOH L 17 317 318 HOH HOH . K 10 HOH L 18 318 319 HOH HOH . K 10 HOH L 19 319 320 HOH HOH . K 10 HOH L 20 320 321 HOH HOH . K 10 HOH L 21 321 322 HOH HOH . K 10 HOH L 22 322 325 HOH HOH . K 10 HOH L 23 323 326 HOH HOH . K 10 HOH L 24 324 327 HOH HOH . K 10 HOH L 25 325 328 HOH HOH . K 10 HOH L 26 326 329 HOH HOH . K 10 HOH L 27 327 330 HOH HOH . K 10 HOH L 28 328 331 HOH HOH . K 10 HOH L 29 329 332 HOH HOH . K 10 HOH L 30 330 333 HOH HOH . K 10 HOH L 31 331 336 HOH HOH . K 10 HOH L 32 332 338 HOH HOH . K 10 HOH L 33 333 339 HOH HOH . K 10 HOH L 34 334 340 HOH HOH . K 10 HOH L 35 335 341 HOH HOH . K 10 HOH L 36 336 342 HOH HOH . K 10 HOH L 37 337 317 HOH HOH . K 10 HOH L 38 338 349 HOH HOH . K 10 HOH L 39 339 344 HOH HOH . L 10 HOH H 1 301 323 HOH HOH . L 10 HOH H 2 302 345 HOH HOH . L 10 HOH H 3 303 346 HOH HOH . L 10 HOH H 4 304 301 HOH HOH . L 10 HOH H 5 305 302 HOH HOH . L 10 HOH H 6 306 304 HOH HOH . L 10 HOH H 7 307 308 HOH HOH . L 10 HOH H 8 308 310 HOH HOH . L 10 HOH H 9 309 311 HOH HOH . L 10 HOH H 10 310 312 HOH HOH . L 10 HOH H 11 311 313 HOH HOH . L 10 HOH H 12 312 314 HOH HOH . L 10 HOH H 13 313 315 HOH HOH . L 10 HOH H 14 314 316 HOH HOH . L 10 HOH H 15 315 318 HOH HOH . L 10 HOH H 16 316 319 HOH HOH . L 10 HOH H 17 317 320 HOH HOH . L 10 HOH H 18 318 321 HOH HOH . L 10 HOH H 19 319 322 HOH HOH . L 10 HOH H 20 320 323 HOH HOH . L 10 HOH H 21 321 324 HOH HOH . L 10 HOH H 22 322 325 HOH HOH . L 10 HOH H 23 323 326 HOH HOH . L 10 HOH H 24 324 328 HOH HOH . L 10 HOH H 25 325 329 HOH HOH . L 10 HOH H 26 326 331 HOH HOH . L 10 HOH H 27 327 332 HOH HOH . L 10 HOH H 28 328 333 HOH HOH . L 10 HOH H 29 329 334 HOH HOH . L 10 HOH H 30 330 335 HOH HOH . L 10 HOH H 31 331 336 HOH HOH . L 10 HOH H 32 332 337 HOH HOH . L 10 HOH H 33 333 339 HOH HOH . L 10 HOH H 34 334 340 HOH HOH . L 10 HOH H 35 335 341 HOH HOH . L 10 HOH H 36 336 342 HOH HOH . L 10 HOH H 37 337 344 HOH HOH . L 10 HOH H 38 338 347 HOH HOH . L 10 HOH H 39 339 348 HOH HOH . L 10 HOH H 40 340 350 HOH HOH . L 10 HOH H 41 341 351 HOH HOH . L 10 HOH H 42 342 352 HOH HOH . M 10 HOH B 1 901 338 HOH HOH . M 10 HOH B 2 902 901 HOH HOH . M 10 HOH B 3 903 902 HOH HOH . M 10 HOH B 4 904 903 HOH HOH . M 10 HOH B 5 905 904 HOH HOH . M 10 HOH B 6 906 905 HOH HOH . M 10 HOH B 7 907 907 HOH HOH . M 10 HOH B 8 908 909 HOH HOH . M 10 HOH B 9 909 910 HOH HOH . M 10 HOH B 10 910 911 HOH HOH . M 10 HOH B 11 911 912 HOH HOH . M 10 HOH B 12 912 914 HOH HOH . M 10 HOH B 13 913 915 HOH HOH . M 10 HOH B 14 914 916 HOH HOH . M 10 HOH B 15 915 917 HOH HOH . M 10 HOH B 16 916 924 HOH HOH . M 10 HOH B 17 917 925 HOH HOH . M 10 HOH B 18 918 928 HOH HOH . M 10 HOH B 19 919 929 HOH HOH . M 10 HOH B 20 920 930 HOH HOH . M 10 HOH B 21 921 936 HOH HOH . M 10 HOH B 22 922 939 HOH HOH . M 10 HOH B 23 923 940 HOH HOH . M 10 HOH B 24 924 313 HOH HOH . N 10 HOH C 1 301 309 HOH HOH . N 10 HOH C 2 302 906 HOH HOH . N 10 HOH C 3 303 913 HOH HOH . N 10 HOH C 4 304 918 HOH HOH . N 10 HOH C 5 305 937 HOH HOH . N 10 HOH C 6 306 938 HOH HOH . N 10 HOH C 7 307 301 HOH HOH . N 10 HOH C 8 308 302 HOH HOH . N 10 HOH C 9 309 304 HOH HOH . N 10 HOH C 10 310 305 HOH HOH . N 10 HOH C 11 311 306 HOH HOH . N 10 HOH C 12 312 309 HOH HOH . N 10 HOH C 13 313 310 HOH HOH . N 10 HOH C 14 314 312 HOH HOH . N 10 HOH C 15 315 315 HOH HOH . N 10 HOH C 16 316 318 HOH HOH . N 10 HOH C 17 317 320 HOH HOH . N 10 HOH C 18 318 321 HOH HOH . N 10 HOH C 19 319 324 HOH HOH . N 10 HOH C 20 320 326 HOH HOH . N 10 HOH C 21 321 330 HOH HOH . N 10 HOH C 22 322 331 HOH HOH . N 10 HOH C 23 323 338 HOH HOH . N 10 HOH C 24 324 339 HOH HOH . N 10 HOH C 25 325 341 HOH HOH . N 10 HOH C 26 326 342 HOH HOH . N 10 HOH C 27 327 343 HOH HOH . N 10 HOH C 28 328 345 HOH HOH . N 10 HOH C 29 329 346 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 6 _atom_site.Cartn_x 16.735 _atom_site.Cartn_y 12.032 _atom_site.Cartn_z 42.367 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 74.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 803 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #