data_3WFB
#
_model_server_result.job_id            zoidUs7VoAbmlHoOB54ngA 
_model_server_result.datetime_utc      '2024-11-13 11:47:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3wfb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":805}' 
#
_entry.id    3WFB 
#
_exptl.entry_id    3WFB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3WFB 
_cell.length_a            90.763 
_cell.length_b            110.644 
_cell.length_c            193.546 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3WFB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf2 A SG CYS 134 L CYS 134 1_555 A SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf4 B SG CYS 151 H CYS 151 1_555 B SG CYS 206 H CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
covale ? covale1 D SG CYS 61 C CYS 61 1_555 J CAB HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? 
covale ? covale2 D SG CYS 64 C CYS 64 1_555 J CAC HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? 
metalc ? metalc1 C NE2 HIS 60 B HIS 60 1_555 E FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc2 C OE1 GLU 135 B GLU 135 1_555 I CA CA . B CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? 
metalc ? metalc3 C OE2 GLU 135 B GLU 135 1_555 I CA CA . B CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? 
metalc ? metalc4 C ND1 HIS 207 B HIS 207 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc5 C OE1 GLU 211 B GLU 211 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc6 C OE2 GLU 211 B GLU 211 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc7 C NE2 HIS 258 B HIS 258 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc8 C NE2 HIS 259 B HIS 259 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc9 C NE2 HIS 347 B HIS 347 1_555 F FE HEM . B HEM 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? 
metalc ? metalc10 C NE2 HIS 349 B HIS 349 1_555 E FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc11 E O2D HEM . B HEM 801 1_555 I CA CA . B CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? 
metalc ? metalc12 F O2A HEM . B HEM 802 1_555 I CA CA . B CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? 
metalc ? metalc13 I CA CA . B CA 805 1_555 D O GLY 71 C GLY 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? 
metalc ? metalc14 I CA CA . B CA 805 1_555 D OH TYR 73 C TYR 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? 
metalc ? metalc15 I CA CA . B CA 805 1_555 N O HOH . C HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? 
metalc ? metalc16 D NE2 HIS 65 C HIS 65 1_555 J FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc17 D SD MET 112 C MET 112 1_555 J FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3WFB 
_atom_sites.fract_transf_matrix[1][1]    0.011018 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009038 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005167 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 HEM B 1 801 801 HEM HEM . 
F 5 HEM B 1 802 802 HEM HEM . 
G 6 FE B 1 803 803 FE FE . 
H 7 CL B 1 804 804 CL CL . 
I 8 CA B 1 805 805 CA CA . 
J 9 HEC C 1 201 201 HEC HEC . 
K 10 HOH L 1 301 301 HOH HOH . 
K 10 HOH L 2 302 302 HOH HOH . 
K 10 HOH L 3 303 303 HOH HOH . 
K 10 HOH L 4 304 304 HOH HOH . 
K 10 HOH L 5 305 305 HOH HOH . 
K 10 HOH L 6 306 306 HOH HOH . 
K 10 HOH L 7 307 307 HOH HOH . 
K 10 HOH L 8 308 308 HOH HOH . 
K 10 HOH L 9 309 309 HOH HOH . 
K 10 HOH L 10 310 310 HOH HOH . 
K 10 HOH L 11 311 311 HOH HOH . 
K 10 HOH L 12 312 313 HOH HOH . 
K 10 HOH L 13 313 314 HOH HOH . 
K 10 HOH L 14 314 315 HOH HOH . 
K 10 HOH L 15 315 316 HOH HOH . 
K 10 HOH L 16 316 317 HOH HOH . 
K 10 HOH L 17 317 318 HOH HOH . 
K 10 HOH L 18 318 319 HOH HOH . 
K 10 HOH L 19 319 320 HOH HOH . 
K 10 HOH L 20 320 321 HOH HOH . 
K 10 HOH L 21 321 322 HOH HOH . 
K 10 HOH L 22 322 325 HOH HOH . 
K 10 HOH L 23 323 326 HOH HOH . 
K 10 HOH L 24 324 327 HOH HOH . 
K 10 HOH L 25 325 328 HOH HOH . 
K 10 HOH L 26 326 329 HOH HOH . 
K 10 HOH L 27 327 330 HOH HOH . 
K 10 HOH L 28 328 331 HOH HOH . 
K 10 HOH L 29 329 332 HOH HOH . 
K 10 HOH L 30 330 333 HOH HOH . 
K 10 HOH L 31 331 336 HOH HOH . 
K 10 HOH L 32 332 338 HOH HOH . 
K 10 HOH L 33 333 339 HOH HOH . 
K 10 HOH L 34 334 340 HOH HOH . 
K 10 HOH L 35 335 341 HOH HOH . 
K 10 HOH L 36 336 342 HOH HOH . 
K 10 HOH L 37 337 317 HOH HOH . 
K 10 HOH L 38 338 349 HOH HOH . 
K 10 HOH L 39 339 344 HOH HOH . 
L 10 HOH H 1 301 323 HOH HOH . 
L 10 HOH H 2 302 345 HOH HOH . 
L 10 HOH H 3 303 346 HOH HOH . 
L 10 HOH H 4 304 301 HOH HOH . 
L 10 HOH H 5 305 302 HOH HOH . 
L 10 HOH H 6 306 304 HOH HOH . 
L 10 HOH H 7 307 308 HOH HOH . 
L 10 HOH H 8 308 310 HOH HOH . 
L 10 HOH H 9 309 311 HOH HOH . 
L 10 HOH H 10 310 312 HOH HOH . 
L 10 HOH H 11 311 313 HOH HOH . 
L 10 HOH H 12 312 314 HOH HOH . 
L 10 HOH H 13 313 315 HOH HOH . 
L 10 HOH H 14 314 316 HOH HOH . 
L 10 HOH H 15 315 318 HOH HOH . 
L 10 HOH H 16 316 319 HOH HOH . 
L 10 HOH H 17 317 320 HOH HOH . 
L 10 HOH H 18 318 321 HOH HOH . 
L 10 HOH H 19 319 322 HOH HOH . 
L 10 HOH H 20 320 323 HOH HOH . 
L 10 HOH H 21 321 324 HOH HOH . 
L 10 HOH H 22 322 325 HOH HOH . 
L 10 HOH H 23 323 326 HOH HOH . 
L 10 HOH H 24 324 328 HOH HOH . 
L 10 HOH H 25 325 329 HOH HOH . 
L 10 HOH H 26 326 331 HOH HOH . 
L 10 HOH H 27 327 332 HOH HOH . 
L 10 HOH H 28 328 333 HOH HOH . 
L 10 HOH H 29 329 334 HOH HOH . 
L 10 HOH H 30 330 335 HOH HOH . 
L 10 HOH H 31 331 336 HOH HOH . 
L 10 HOH H 32 332 337 HOH HOH . 
L 10 HOH H 33 333 339 HOH HOH . 
L 10 HOH H 34 334 340 HOH HOH . 
L 10 HOH H 35 335 341 HOH HOH . 
L 10 HOH H 36 336 342 HOH HOH . 
L 10 HOH H 37 337 344 HOH HOH . 
L 10 HOH H 38 338 347 HOH HOH . 
L 10 HOH H 39 339 348 HOH HOH . 
L 10 HOH H 40 340 350 HOH HOH . 
L 10 HOH H 41 341 351 HOH HOH . 
L 10 HOH H 42 342 352 HOH HOH . 
M 10 HOH B 1 901 338 HOH HOH . 
M 10 HOH B 2 902 901 HOH HOH . 
M 10 HOH B 3 903 902 HOH HOH . 
M 10 HOH B 4 904 903 HOH HOH . 
M 10 HOH B 5 905 904 HOH HOH . 
M 10 HOH B 6 906 905 HOH HOH . 
M 10 HOH B 7 907 907 HOH HOH . 
M 10 HOH B 8 908 909 HOH HOH . 
M 10 HOH B 9 909 910 HOH HOH . 
M 10 HOH B 10 910 911 HOH HOH . 
M 10 HOH B 11 911 912 HOH HOH . 
M 10 HOH B 12 912 914 HOH HOH . 
M 10 HOH B 13 913 915 HOH HOH . 
M 10 HOH B 14 914 916 HOH HOH . 
M 10 HOH B 15 915 917 HOH HOH . 
M 10 HOH B 16 916 924 HOH HOH . 
M 10 HOH B 17 917 925 HOH HOH . 
M 10 HOH B 18 918 928 HOH HOH . 
M 10 HOH B 19 919 929 HOH HOH . 
M 10 HOH B 20 920 930 HOH HOH . 
M 10 HOH B 21 921 936 HOH HOH . 
M 10 HOH B 22 922 939 HOH HOH . 
M 10 HOH B 23 923 940 HOH HOH . 
M 10 HOH B 24 924 313 HOH HOH . 
N 10 HOH C 1 301 309 HOH HOH . 
N 10 HOH C 2 302 906 HOH HOH . 
N 10 HOH C 3 303 913 HOH HOH . 
N 10 HOH C 4 304 918 HOH HOH . 
N 10 HOH C 5 305 937 HOH HOH . 
N 10 HOH C 6 306 938 HOH HOH . 
N 10 HOH C 7 307 301 HOH HOH . 
N 10 HOH C 8 308 302 HOH HOH . 
N 10 HOH C 9 309 304 HOH HOH . 
N 10 HOH C 10 310 305 HOH HOH . 
N 10 HOH C 11 311 306 HOH HOH . 
N 10 HOH C 12 312 309 HOH HOH . 
N 10 HOH C 13 313 310 HOH HOH . 
N 10 HOH C 14 314 312 HOH HOH . 
N 10 HOH C 15 315 315 HOH HOH . 
N 10 HOH C 16 316 318 HOH HOH . 
N 10 HOH C 17 317 320 HOH HOH . 
N 10 HOH C 18 318 321 HOH HOH . 
N 10 HOH C 19 319 324 HOH HOH . 
N 10 HOH C 20 320 326 HOH HOH . 
N 10 HOH C 21 321 330 HOH HOH . 
N 10 HOH C 22 322 331 HOH HOH . 
N 10 HOH C 23 323 338 HOH HOH . 
N 10 HOH C 24 324 339 HOH HOH . 
N 10 HOH C 25 325 341 HOH HOH . 
N 10 HOH C 26 326 342 HOH HOH . 
N 10 HOH C 27 327 343 HOH HOH . 
N 10 HOH C 28 328 345 HOH HOH . 
N 10 HOH C 29 329 346 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       8 
_atom_site.Cartn_x               22.796 
_atom_site.Cartn_y               8.979 
_atom_site.Cartn_z               32.813 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        73.84 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           805 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           1 
#