data_3WH0 # _model_server_result.job_id cLxS7V2M4sCQEERpT1wUnQ _model_server_result.datetime_utc '2024-11-24 20:25:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wh0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 3WH0 # _exptl.entry_id 3WH0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,3-DIHYDROXY-1,4-DITHIOBUTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3WH0 _cell.length_a 68.474 _cell.length_b 68.474 _cell.length_c 80.215 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WH0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id DTT _chem_comp.mon_nstd_flag . _chem_comp.name 2,3-DIHYDROXY-1,4-DITHIOBUTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1,4-DITHIOTHREITOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 DTT sing 83 n n S1 HS1 DTT sing 84 n n C1 C2 DTT sing 85 n n C1 H11 DTT sing 86 n n C1 H12 DTT sing 87 n n C2 O2 DTT sing 88 n n C2 C3 DTT sing 89 n n C2 H2 DTT sing 90 n n O2 HO2 DTT sing 91 n n C3 O3 DTT sing 92 n n C3 C4 DTT sing 93 n n C3 H3 DTT sing 94 n n O3 HO3 DTT sing 95 n n C4 S4 DTT sing 96 n n C4 H41 DTT sing 97 n n C4 H42 DTT sing 98 n n S4 HS2 DTT sing 99 n n # _atom_sites.entry_id 3WH0 _atom_sites.fract_transf_matrix[1][1] 0.014604 _atom_sites.fract_transf_matrix[1][2] 0.008432 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016863 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 1 SO4 SO4 . C 3 O4B A 1 202 1 O4B DRG . D 3 O4B A 1 203 2 O4B DRG . E 4 DTT A 1 204 100 DTT DTT . F 5 HOH A 1 301 1 HOH HOH . F 5 HOH A 2 302 2 HOH HOH . F 5 HOH A 3 303 3 HOH HOH . F 5 HOH A 4 304 4 HOH HOH . F 5 HOH A 5 305 5 HOH HOH . F 5 HOH A 6 306 6 HOH HOH . F 5 HOH A 7 307 7 HOH HOH . F 5 HOH A 8 308 8 HOH HOH . F 5 HOH A 9 309 9 HOH HOH . F 5 HOH A 10 310 10 HOH HOH . F 5 HOH A 11 311 11 HOH HOH . F 5 HOH A 12 312 12 HOH HOH . F 5 HOH A 13 313 13 HOH HOH . F 5 HOH A 14 314 14 HOH HOH . F 5 HOH A 15 315 15 HOH HOH . F 5 HOH A 16 316 16 HOH HOH . F 5 HOH A 17 317 17 HOH HOH . F 5 HOH A 18 318 18 HOH HOH . F 5 HOH A 19 319 19 HOH HOH . F 5 HOH A 20 320 20 HOH HOH . F 5 HOH A 21 321 21 HOH HOH . F 5 HOH A 22 322 22 HOH HOH . F 5 HOH A 23 323 23 HOH HOH . F 5 HOH A 24 324 24 HOH HOH . F 5 HOH A 25 325 25 HOH HOH . F 5 HOH A 26 326 26 HOH HOH . F 5 HOH A 27 327 27 HOH HOH . F 5 HOH A 28 328 28 HOH HOH . F 5 HOH A 29 329 29 HOH HOH . F 5 HOH A 30 330 30 HOH HOH . F 5 HOH A 31 331 31 HOH HOH . F 5 HOH A 32 332 32 HOH HOH . F 5 HOH A 33 333 33 HOH HOH . F 5 HOH A 34 334 34 HOH HOH . F 5 HOH A 35 335 35 HOH HOH . F 5 HOH A 36 336 36 HOH HOH . F 5 HOH A 37 337 37 HOH HOH . F 5 HOH A 38 338 38 HOH HOH . F 5 HOH A 39 339 39 HOH HOH . F 5 HOH A 40 340 40 HOH HOH . F 5 HOH A 41 341 41 HOH HOH . F 5 HOH A 42 342 42 HOH HOH . F 5 HOH A 43 343 43 HOH HOH . F 5 HOH A 44 344 44 HOH HOH . F 5 HOH A 45 345 45 HOH HOH . F 5 HOH A 46 346 46 HOH HOH . F 5 HOH A 47 347 47 HOH HOH . F 5 HOH A 48 348 48 HOH HOH . F 5 HOH A 49 349 49 HOH HOH . F 5 HOH A 50 350 50 HOH HOH . F 5 HOH A 51 351 51 HOH HOH . F 5 HOH A 52 352 52 HOH HOH . F 5 HOH A 53 353 53 HOH HOH . F 5 HOH A 54 354 54 HOH HOH . F 5 HOH A 55 355 55 HOH HOH . F 5 HOH A 56 356 56 HOH HOH . F 5 HOH A 57 357 57 HOH HOH . F 5 HOH A 58 358 58 HOH HOH . F 5 HOH A 59 359 59 HOH HOH . F 5 HOH A 60 360 60 HOH HOH . F 5 HOH A 61 361 61 HOH HOH . F 5 HOH A 62 362 62 HOH HOH . F 5 HOH A 63 363 63 HOH HOH . F 5 HOH A 64 364 64 HOH HOH . F 5 HOH A 65 365 65 HOH HOH . F 5 HOH A 66 366 66 HOH HOH . F 5 HOH A 67 367 67 HOH HOH . F 5 HOH A 68 368 68 HOH HOH . F 5 HOH A 69 369 69 HOH HOH . F 5 HOH A 70 370 70 HOH HOH . F 5 HOH A 71 371 71 HOH HOH . F 5 HOH A 72 372 72 HOH HOH . F 5 HOH A 73 373 73 HOH HOH . F 5 HOH A 74 375 75 HOH HOH . F 5 HOH A 75 376 76 HOH HOH . F 5 HOH A 76 377 77 HOH HOH . F 5 HOH A 77 378 78 HOH HOH . F 5 HOH A 78 379 79 HOH HOH . F 5 HOH A 79 380 81 HOH HOH . F 5 HOH A 80 381 82 HOH HOH . F 5 HOH A 81 382 83 HOH HOH . F 5 HOH A 82 383 84 HOH HOH . F 5 HOH A 83 384 86 HOH HOH . F 5 HOH A 84 385 87 HOH HOH . F 5 HOH A 85 386 88 HOH HOH . F 5 HOH A 86 387 90 HOH HOH . F 5 HOH A 87 388 91 HOH HOH . F 5 HOH A 88 389 92 HOH HOH . F 5 HOH A 89 390 93 HOH HOH . F 5 HOH A 90 391 94 HOH HOH . F 5 HOH A 91 392 95 HOH HOH . F 5 HOH A 92 393 96 HOH HOH . F 5 HOH A 93 394 97 HOH HOH . F 5 HOH A 94 395 98 HOH HOH . F 5 HOH A 95 396 99 HOH HOH . F 5 HOH A 96 397 100 HOH HOH . F 5 HOH A 97 398 101 HOH HOH . F 5 HOH A 98 399 102 HOH HOH . F 5 HOH A 99 400 103 HOH HOH . F 5 HOH A 100 401 104 HOH HOH . F 5 HOH A 101 402 105 HOH HOH . F 5 HOH A 102 403 106 HOH HOH . F 5 HOH A 103 404 107 HOH HOH . F 5 HOH A 104 405 108 HOH HOH . F 5 HOH A 105 406 109 HOH HOH . F 5 HOH A 106 407 110 HOH HOH . F 5 HOH A 107 408 111 HOH HOH . F 5 HOH A 108 409 112 HOH HOH . F 5 HOH A 109 410 113 HOH HOH . F 5 HOH A 110 411 114 HOH HOH . F 5 HOH A 111 413 116 HOH HOH . F 5 HOH A 112 414 117 HOH HOH . F 5 HOH A 113 415 118 HOH HOH . F 5 HOH A 114 416 119 HOH HOH . F 5 HOH A 115 417 120 HOH HOH . F 5 HOH A 116 418 121 HOH HOH . F 5 HOH A 117 419 123 HOH HOH . F 5 HOH A 118 420 124 HOH HOH . F 5 HOH A 119 421 125 HOH HOH . F 5 HOH A 120 422 126 HOH HOH . F 5 HOH A 121 425 130 HOH HOH . F 5 HOH A 122 426 131 HOH HOH . F 5 HOH A 123 427 132 HOH HOH . F 5 HOH A 124 428 133 HOH HOH . F 5 HOH A 125 429 134 HOH HOH . F 5 HOH A 126 430 135 HOH HOH . F 5 HOH A 127 432 137 HOH HOH . F 5 HOH A 128 434 139 HOH HOH . F 5 HOH A 129 435 140 HOH HOH . F 5 HOH A 130 436 141 HOH HOH . F 5 HOH A 131 437 142 HOH HOH . F 5 HOH A 132 439 144 HOH HOH . F 5 HOH A 133 440 145 HOH HOH . F 5 HOH A 134 441 146 HOH HOH . F 5 HOH A 135 442 147 HOH HOH . F 5 HOH A 136 443 148 HOH HOH . F 5 HOH A 137 445 151 HOH HOH . F 5 HOH A 138 446 152 HOH HOH . F 5 HOH A 139 447 153 HOH HOH . F 5 HOH A 140 448 154 HOH HOH . F 5 HOH A 141 449 155 HOH HOH . F 5 HOH A 142 450 156 HOH HOH . F 5 HOH A 143 451 157 HOH HOH . F 5 HOH A 144 452 158 HOH HOH . F 5 HOH A 145 453 159 HOH HOH . F 5 HOH A 146 454 160 HOH HOH . F 5 HOH A 147 455 161 HOH HOH . F 5 HOH A 148 456 162 HOH HOH . F 5 HOH A 149 457 163 HOH HOH . F 5 HOH A 150 458 164 HOH HOH . F 5 HOH A 151 459 165 HOH HOH . F 5 HOH A 152 461 167 HOH HOH . F 5 HOH A 153 462 168 HOH HOH . F 5 HOH A 154 463 169 HOH HOH . F 5 HOH A 155 465 171 HOH HOH . F 5 HOH A 156 466 172 HOH HOH . F 5 HOH A 157 467 173 HOH HOH . F 5 HOH A 158 468 174 HOH HOH . F 5 HOH A 159 469 175 HOH HOH . F 5 HOH A 160 470 176 HOH HOH . F 5 HOH A 161 471 177 HOH HOH . F 5 HOH A 162 472 178 HOH HOH . F 5 HOH A 163 473 179 HOH HOH . F 5 HOH A 164 474 180 HOH HOH . F 5 HOH A 165 475 181 HOH HOH . F 5 HOH A 166 476 182 HOH HOH . F 5 HOH A 167 477 183 HOH HOH . F 5 HOH A 168 478 184 HOH HOH . F 5 HOH A 169 479 185 HOH HOH . F 5 HOH A 170 480 186 HOH HOH . F 5 HOH A 171 481 187 HOH HOH . F 5 HOH A 172 482 188 HOH HOH . F 5 HOH A 173 483 189 HOH HOH . F 5 HOH A 174 484 190 HOH HOH . F 5 HOH A 175 485 191 HOH HOH . F 5 HOH A 176 486 192 HOH HOH . F 5 HOH A 177 487 193 HOH HOH . F 5 HOH A 178 488 194 HOH HOH . F 5 HOH A 179 490 196 HOH HOH . F 5 HOH A 180 491 197 HOH HOH . F 5 HOH A 181 492 198 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 DTT . . . E 4 -39.428 18.413 15.054 1 64.12 ? S1 DTT 204 A 1 HETATM 2 C C1 DTT . . . E 4 -38.657 17.76 13.541 1 41.42 ? C1 DTT 204 A 1 HETATM 3 C C2 DTT . . . E 4 -38.381 16.263 13.61 1 45.63 ? C2 DTT 204 A 1 HETATM 4 O O2 DTT . . . E 4 -38.838 15.731 14.865 1 55.45 ? O2 DTT 204 A 1 HETATM 5 C C3 DTT . . . E 4 -36.905 15.908 13.596 1 42.2 ? C3 DTT 204 A 1 HETATM 6 O O3 DTT . . . E 4 -36.575 15.49 14.92 1 41.76 ? O3 DTT 204 A 1 HETATM 7 C C4 DTT . . . E 4 -36.54 14.789 12.631 1 36.98 ? C4 DTT 204 A 1 HETATM 8 S S4 DTT . . . E 4 -37.418 13.222 12.813 1 48.22 ? S4 DTT 204 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #