data_3WI8
#
_model_server_result.job_id            VI2XgGLsEiY8LHldR6OFBQ 
_model_server_result.datetime_utc      '2024-10-14 05:26:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3wi8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    3WI8 
#
_exptl.entry_id    3WI8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              619.612 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PORPHYCENE CONTAINING MN' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.18 
_cell.angle_gamma         90 
_cell.entry_id            3WI8 
_cell.length_a            34.828 
_cell.length_b            28.657 
_cell.length_c            63.744 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3WI8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 B MN HNN . A HNN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? 
metalc ? metalc2 B MN HNN . A HNN 201 1_555 E O HOH . A HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? 
#
_chem_comp.formula           'C34 H36 Mn N4 O4 2' 
_chem_comp.formula_weight    619.612 
_chem_comp.id                HNN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PORPHYCENE CONTAINING MN' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1C CGD HNN doub 137 n n 
CGD O2C HNN sing 138 n n 
CGD CBD HNN sing 139 n n 
CBD CAC HNN sing 140 n n 
CAB C2B HNN sing 141 n n 
CAB CBB HNN sing 142 n n 
CAC C3C HNN sing 143 n n 
CMB C3B HNN sing 144 n n 
C2B C3B HNN doub 145 n y 
C2B C1B HNN sing 146 n y 
C3B C4B HNN sing 147 n y 
C3C C4C HNN sing 148 n y 
C3C C2C HNN doub 149 n y 
CMC C2C HNN sing 150 n n 
C1B C4C HNN doub 151 n y 
C1B NB HNN sing 152 n y 
C4C NC HNN sing 153 n y 
C2C C1C HNN sing 154 n y 
C4B NB HNN sing 155 n y 
C4B CD1 HNN doub 156 n y 
CBB CGB HNN sing 157 n n 
NB MN HNN sing 158 n n 
CD1 CD2 HNN sing 159 n y 
NC C1C HNN doub 160 n y 
NC MN HNN sing 161 n n 
C1C CB2 HNN sing 162 n y 
C6D C5D HNN sing 163 n n 
MN NA HNN sing 164 n n 
MN ND HNN sing 165 n n 
CD2 C1A HNN doub 166 n y 
CB2 CB1 HNN doub 167 n y 
C1A NA HNN sing 168 n y 
C1A C2A HNN sing 169 n y 
NA C4A HNN doub 170 n y 
CB1 C4D HNN sing 171 n y 
ND C4D HNN sing 172 n y 
ND C1D HNN sing 173 n y 
C4D C3D HNN doub 174 n y 
C2A C5A HNN sing 175 n n 
C2A C3A HNN doub 176 n y 
C4A C1D HNN sing 177 n y 
C4A C3A HNN sing 178 n y 
C5A C6A HNN sing 179 n n 
C1D C2D HNN doub 180 n y 
CGB O2B HNN doub 181 n n 
CGB O1B HNN sing 182 n n 
C3A C7A HNN sing 183 n n 
C3D C2D HNN sing 184 n y 
C3D C5D HNN sing 185 n n 
C2D C7D HNN sing 186 n n 
O1B H1 HNN sing 187 n n 
CBB H2 HNN sing 188 n n 
CBB H3 HNN sing 189 n n 
CAB H4 HNN sing 190 n n 
CAB H5 HNN sing 191 n n 
CMB H6 HNN sing 192 n n 
CMB H7 HNN sing 193 n n 
CMB H8 HNN sing 194 n n 
CAC H9 HNN sing 195 n n 
CAC H10 HNN sing 196 n n 
CBD H11 HNN sing 197 n n 
CBD H12 HNN sing 198 n n 
O2C H13 HNN sing 199 n n 
CMC H14 HNN sing 200 n n 
CMC H15 HNN sing 201 n n 
CMC H16 HNN sing 202 n n 
CB2 H17 HNN sing 203 n n 
CB1 H18 HNN sing 204 n n 
CD1 H19 HNN sing 205 n n 
CD2 H20 HNN sing 206 n n 
C7D H21 HNN sing 207 n n 
C7D H22 HNN sing 208 n n 
C7D H23 HNN sing 209 n n 
C5D H24 HNN sing 210 n n 
C5D H25 HNN sing 211 n n 
C6D H26 HNN sing 212 n n 
C6D H27 HNN sing 213 n n 
C6D H28 HNN sing 214 n n 
C7A H29 HNN sing 215 n n 
C7A H30 HNN sing 216 n n 
C7A H31 HNN sing 217 n n 
C5A H32 HNN sing 218 n n 
C5A H33 HNN sing 219 n n 
C6A H34 HNN sing 220 n n 
C6A H35 HNN sing 221 n n 
C6A H36 HNN sing 222 n n 
#
_atom_sites.entry_id                     3WI8 
_atom_sites.fract_transf_matrix[1][1]    0.028713 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007789 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.034895 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016255 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HNN A 1 201 1000 HNN HMN . 
C 3 SO4 A 1 202 1156 SO4 SO4 . 
D 3 SO4 A 1 203 1157 SO4 SO4 . 
E 4 HOH A 1 1001 1001 HOH HOH . 
E 4 HOH A 2 1002 1 HOH HOH . 
E 4 HOH A 3 1003 2 HOH HOH . 
E 4 HOH A 4 1004 3 HOH HOH . 
E 4 HOH A 5 1005 4 HOH HOH . 
E 4 HOH A 6 1006 5 HOH HOH . 
E 4 HOH A 7 1007 6 HOH HOH . 
E 4 HOH A 8 1008 7 HOH HOH . 
E 4 HOH A 9 1009 8 HOH HOH . 
E 4 HOH A 10 1010 9 HOH HOH . 
E 4 HOH A 11 1011 10 HOH HOH . 
E 4 HOH A 12 1012 11 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O2B HNN . . . B 2 12.28 7.564 17.118 1 71 ? O2B HNN 201 A 1 
HETATM 2 C CGB HNN . . . B 2 11.437 8.34 16.581 1 70.31 ? CGB HNN 201 A 1 
HETATM 3 O O1B HNN . . . B 2 10.457 8.803 17.206 1 69.94 ? O1B HNN 201 A 1 
HETATM 4 C CBB HNN . . . B 2 11.595 8.785 15.129 1 69.29 ? CBB HNN 201 A 1 
HETATM 5 C CAB HNN . . . B 2 11.041 7.802 14.091 1 66.74 ? CAB HNN 201 A 1 
HETATM 6 C C2B HNN . . . B 2 11.233 6.36 14.506 1 65.23 ? C2B HNN 201 A 1 
HETATM 7 C C3B HNN . . . B 2 12.476 5.688 14.642 1 64.33 ? C3B HNN 201 A 1 
HETATM 8 C CMB HNN . . . B 2 13.877 6.176 14.435 1 64.57 ? CMB HNN 201 A 1 
HETATM 9 C C1B HNN . . . B 2 10.287 5.389 14.854 1 63.68 ? C1B HNN 201 A 1 
HETATM 10 C C4C HNN . . . B 2 8.877 5.353 14.931 1 63.33 ? C4C HNN 201 A 1 
HETATM 11 C C3C HNN . . . B 2 7.88 6.306 14.695 1 63.91 ? C3C HNN 201 A 1 
HETATM 12 C CAC HNN . . . B 2 8.015 7.738 14.229 1 64.53 ? CAC HNN 201 A 1 
HETATM 13 C CBD HNN . . . B 2 7.924 7.689 12.698 1 65.77 ? CBD HNN 201 A 1 
HETATM 14 C CGD HNN . . . B 2 8.583 8.876 12.02 1 66.89 ? CGD HNN 201 A 1 
HETATM 15 O O2C HNN . . . B 2 8.45 10.028 12.514 1 65.54 ? O2C HNN 201 A 1 
HETATM 16 O O1C HNN . . . B 2 9.237 8.639 10.97 1 67.75 ? O1C HNN 201 A 1 
HETATM 17 C C2C HNN . . . B 2 6.668 5.618 14.958 1 62.97 ? C2C HNN 201 A 1 
HETATM 18 C CMC HNN . . . B 2 5.272 6.179 14.854 1 62.6 ? CMC HNN 201 A 1 
HETATM 19 N NC HNN . . . B 2 8.328 4.214 15.321 1 62.16 ? NC HNN 201 A 1 
HETATM 20 C C1C HNN . . . B 2 6.998 4.313 15.342 1 61.46 ? C1C HNN 201 A 1 
HETATM 21 C CB2 HNN . . . B 2 6 3.279 15.695 1 60.85 ? CB2 HNN 201 A 1 
HETATM 22 C CB1 HNN . . . B 2 6.094 2.009 16.067 1 61.07 ? CB1 HNN 201 A 1 
HETATM 23 C C4D HNN . . . B 2 7.203 1.033 16.307 1 61.41 ? C4D HNN 201 A 1 
HETATM 24 MN MN HNN . . . B 2 9.697 2.75 15.64 1 61.13 ? MN HNN 201 A 1 
HETATM 25 N NA HNN . . . B 2 11.09 1.281 16.047 1 62.67 ? NA HNN 201 A 1 
HETATM 26 N NB HNN . . . B 2 10.914 4.285 15.174 1 63.22 ? NB HNN 201 A 1 
HETATM 27 C C4B HNN . . . B 2 12.223 4.405 15.043 1 63.43 ? C4B HNN 201 A 1 
HETATM 28 C CD1 HNN . . . B 2 13.324 3.452 15.29 1 62.55 ? CD1 HNN 201 A 1 
HETATM 29 C CD2 HNN . . . B 2 13.408 2.188 15.652 1 61.68 ? CD2 HNN 201 A 1 
HETATM 30 C C1A HNN . . . B 2 12.418 1.168 16.023 1 62.1 ? C1A HNN 201 A 1 
HETATM 31 N ND HNN . . . B 2 8.497 1.201 16.194 1 61.2 ? ND HNN 201 A 1 
HETATM 32 C C1D HNN . . . B 2 9.153 0.079 16.488 1 61.8 ? C1D HNN 201 A 1 
HETATM 33 C C2D HNN . . . B 2 8.26 -0.932 16.834 1 61.15 ? C2D HNN 201 A 1 
HETATM 34 C C7D HNN . . . B 2 8.498 -2.356 17.255 1 60.32 ? C7D HNN 201 A 1 
HETATM 35 C C3D HNN . . . B 2 7.016 -0.296 16.712 1 62.37 ? C3D HNN 201 A 1 
HETATM 36 C C5D HNN . . . B 2 5.665 -0.91 16.947 1 63.6 ? C5D HNN 201 A 1 
HETATM 37 C C6D HNN . . . B 2 5.087 -1.139 15.559 1 64.61 ? C6D HNN 201 A 1 
HETATM 38 C C4A HNN . . . B 2 10.57 0.122 16.414 1 61.78 ? C4A HNN 201 A 1 
HETATM 39 C C3A HNN . . . B 2 11.585 -0.818 16.659 1 62.52 ? C3A HNN 201 A 1 
HETATM 40 C C7A HNN . . . B 2 11.506 -2.261 17.092 1 60.96 ? C7A HNN 201 A 1 
HETATM 41 C C2A HNN . . . B 2 12.779 -0.127 16.387 1 62.08 ? C2A HNN 201 A 1 
HETATM 42 C C5A HNN . . . B 2 14.192 -0.669 16.469 1 61.03 ? C5A HNN 201 A 1 
HETATM 43 C C6A HNN . . . B 2 14.742 -0.407 17.848 1 62.01 ? C6A HNN 201 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           43 
#