data_3WKC
#
_model_server_result.job_id            ExKfGEF3d2wnLMJRFt7S7Q 
_model_server_result.datetime_utc      '2024-10-18 14:30:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3wkc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":603}' 
#
_entry.id    3WKC 
#
_exptl.entry_id    3WKC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              277.385 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-{2,5-dimethyl-1-[(2R)-tetrahydrofuran-2-ylmethyl]-1H-pyrrol-3-yl}-1,3-thiazol-2-amine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3WKC 
_cell.length_a            92.518 
_cell.length_b            92.518 
_cell.length_c            243.447 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3WKC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_455 -x+y-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -92.518 0 121.7235 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 9 A ASP 9 1_555 B MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
metalc ? metalc2 A O ASP 11 A ASP 11 1_555 B MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? 
metalc ? metalc3 A OD1 ASP 185 A ASP 185 1_555 B MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc4 B MG MG . A MG 601 1_555 C O1 PO4 . A PO4 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
#
_chem_comp.formula           'C14 H19 N3 O S' 
_chem_comp.formula_weight    277.385 
_chem_comp.id                S0J 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-{2,5-dimethyl-1-[(2R)-tetrahydrofuran-2-ylmethyl]-1H-pyrrol-3-yl}-1,3-thiazol-2-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N18 C17 S0J sing 281 n n 
C17 S16 S0J sing 282 n y 
C17 N19 S0J doub 283 n y 
S16 C15 S0J sing 284 n y 
N19 C14 S0J sing 285 n y 
C15 C14 S0J doub 286 n y 
C14 C4 S0J sing 287 n n 
C6 C5 S0J sing 288 n n 
C4 C5 S0J doub 289 n y 
C4 C3 S0J sing 290 n y 
C5 N7 S0J sing 291 n y 
C3 C2 S0J doub 292 n y 
N7 C2 S0J sing 293 n y 
N7 C8 S0J sing 294 n n 
C2 C1 S0J sing 295 n n 
C8 C9 S0J sing 296 n n 
C12 O13 S0J sing 297 n n 
C12 C11 S0J sing 298 n n 
O13 C9 S0J sing 299 n n 
C9 C10 S0J sing 300 n n 
C10 C11 S0J sing 301 n n 
C3 H1 S0J sing 302 n n 
C15 H2 S0J sing 303 n n 
C11 H3 S0J sing 304 n n 
C11 H4 S0J sing 305 n n 
C10 H5 S0J sing 306 n n 
C10 H6 S0J sing 307 n n 
C12 H7 S0J sing 308 n n 
C12 H8 S0J sing 309 n n 
C9 H9 S0J sing 310 n n 
C1 H10 S0J sing 311 n n 
C1 H11 S0J sing 312 n n 
C1 H12 S0J sing 313 n n 
C6 H13 S0J sing 314 n n 
C6 H14 S0J sing 315 n n 
C6 H15 S0J sing 316 n n 
C8 H16 S0J sing 317 n n 
C8 H17 S0J sing 318 n n 
N18 H18 S0J sing 319 n n 
N18 H19 S0J sing 320 n n 
#
_atom_sites.entry_id                     3WKC 
_atom_sites.fract_transf_matrix[1][1]    0.010809 
_atom_sites.fract_transf_matrix[1][2]    0.00624 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012481 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004108 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 601 782 MG MG . 
C 3 PO4 A 1 602 783 PO4 PO4 . 
D 4 S0J A 1 603 1 S0J S0J . 
E 5 HOH A 1 701 1 HOH HOH . 
E 5 HOH A 2 702 2 HOH HOH . 
E 5 HOH A 3 703 3 HOH HOH . 
E 5 HOH A 4 704 4 HOH HOH . 
E 5 HOH A 5 705 5 HOH HOH . 
E 5 HOH A 6 706 6 HOH HOH . 
E 5 HOH A 7 707 7 HOH HOH . 
E 5 HOH A 8 708 8 HOH HOH . 
E 5 HOH A 9 709 9 HOH HOH . 
E 5 HOH A 10 710 10 HOH HOH . 
E 5 HOH A 11 711 11 HOH HOH . 
E 5 HOH A 12 712 12 HOH HOH . 
E 5 HOH A 13 713 13 HOH HOH . 
E 5 HOH A 14 714 14 HOH HOH . 
E 5 HOH A 15 715 15 HOH HOH . 
E 5 HOH A 16 716 16 HOH HOH . 
E 5 HOH A 17 717 17 HOH HOH . 
E 5 HOH A 18 718 18 HOH HOH . 
E 5 HOH A 19 719 19 HOH HOH . 
E 5 HOH A 20 720 20 HOH HOH . 
E 5 HOH A 21 721 21 HOH HOH . 
E 5 HOH A 22 722 22 HOH HOH . 
E 5 HOH A 23 723 23 HOH HOH . 
E 5 HOH A 24 724 24 HOH HOH . 
E 5 HOH A 25 725 25 HOH HOH . 
E 5 HOH A 26 726 26 HOH HOH . 
E 5 HOH A 27 727 27 HOH HOH . 
E 5 HOH A 28 728 28 HOH HOH . 
E 5 HOH A 29 729 29 HOH HOH . 
E 5 HOH A 30 730 30 HOH HOH . 
E 5 HOH A 31 731 31 HOH HOH . 
E 5 HOH A 32 732 32 HOH HOH . 
E 5 HOH A 33 733 33 HOH HOH . 
E 5 HOH A 34 734 34 HOH HOH . 
E 5 HOH A 35 735 35 HOH HOH . 
E 5 HOH A 36 736 36 HOH HOH . 
E 5 HOH A 37 737 37 HOH HOH . 
E 5 HOH A 38 738 38 HOH HOH . 
E 5 HOH A 39 739 39 HOH HOH . 
E 5 HOH A 40 740 40 HOH HOH . 
E 5 HOH A 41 741 41 HOH HOH . 
E 5 HOH A 42 742 42 HOH HOH . 
E 5 HOH A 43 743 43 HOH HOH . 
E 5 HOH A 44 744 44 HOH HOH . 
E 5 HOH A 45 745 45 HOH HOH . 
E 5 HOH A 46 746 46 HOH HOH . 
E 5 HOH A 47 747 47 HOH HOH . 
E 5 HOH A 48 748 48 HOH HOH . 
E 5 HOH A 49 749 49 HOH HOH . 
E 5 HOH A 50 750 50 HOH HOH . 
E 5 HOH A 51 751 51 HOH HOH . 
E 5 HOH A 52 752 52 HOH HOH . 
E 5 HOH A 53 753 53 HOH HOH . 
E 5 HOH A 54 754 54 HOH HOH . 
E 5 HOH A 55 755 55 HOH HOH . 
E 5 HOH A 56 756 56 HOH HOH . 
E 5 HOH A 57 757 57 HOH HOH . 
E 5 HOH A 58 758 58 HOH HOH . 
E 5 HOH A 59 759 59 HOH HOH . 
E 5 HOH A 60 760 60 HOH HOH . 
E 5 HOH A 61 761 61 HOH HOH . 
E 5 HOH A 62 762 62 HOH HOH . 
E 5 HOH A 63 763 63 HOH HOH . 
E 5 HOH A 64 764 64 HOH HOH . 
E 5 HOH A 65 765 65 HOH HOH . 
E 5 HOH A 66 766 66 HOH HOH . 
E 5 HOH A 67 767 67 HOH HOH . 
E 5 HOH A 68 768 68 HOH HOH . 
E 5 HOH A 69 769 69 HOH HOH . 
E 5 HOH A 70 770 70 HOH HOH . 
E 5 HOH A 71 771 71 HOH HOH . 
E 5 HOH A 72 772 72 HOH HOH . 
E 5 HOH A 73 773 73 HOH HOH . 
E 5 HOH A 74 774 74 HOH HOH . 
E 5 HOH A 75 775 75 HOH HOH . 
E 5 HOH A 76 776 76 HOH HOH . 
E 5 HOH A 77 777 77 HOH HOH . 
E 5 HOH A 78 778 78 HOH HOH . 
E 5 HOH A 79 779 79 HOH HOH . 
E 5 HOH A 80 780 80 HOH HOH . 
E 5 HOH A 81 781 81 HOH HOH . 
E 5 HOH A 82 782 82 HOH HOH . 
E 5 HOH A 83 783 83 HOH HOH . 
E 5 HOH A 84 784 84 HOH HOH . 
E 5 HOH A 85 785 85 HOH HOH . 
E 5 HOH A 86 786 86 HOH HOH . 
E 5 HOH A 87 787 87 HOH HOH . 
E 5 HOH A 88 788 88 HOH HOH . 
E 5 HOH A 89 789 89 HOH HOH . 
E 5 HOH A 90 790 90 HOH HOH . 
E 5 HOH A 91 791 91 HOH HOH . 
E 5 HOH A 92 792 92 HOH HOH . 
E 5 HOH A 93 793 93 HOH HOH . 
E 5 HOH A 94 794 94 HOH HOH . 
E 5 HOH A 95 795 95 HOH HOH . 
E 5 HOH A 96 796 96 HOH HOH . 
E 5 HOH A 97 797 97 HOH HOH . 
E 5 HOH A 98 798 98 HOH HOH . 
E 5 HOH A 99 799 99 HOH HOH . 
E 5 HOH A 100 800 100 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C3 S0J . . . D 4 -13.673 -3.551 59.768 1 63.37 ? C3 S0J 603 A 1 
HETATM 2 C C15 S0J . . . D 4 -11.537 -4.3 57.784 1 77.5 ? C15 S0J 603 A 1 
HETATM 3 C C4 S0J . . . D 4 -13.746 -4.665 58.907 1 69.13 ? C4 S0J 603 A 1 
HETATM 4 C C14 S0J . . . D 4 -12.761 -4.914 57.903 1 75.02 ? C14 S0J 603 A 1 
HETATM 5 C C2 S0J . . . D 4 -14.839 -3.565 60.485 1 63.62 ? C2 S0J 603 A 1 
HETATM 6 C C5 S0J . . . D 4 -14.934 -5.342 59.084 1 66.65 ? C5 S0J 603 A 1 
HETATM 7 C C17 S0J . . . D 4 -12.183 -5.872 56.01 1 79.24 ? C17 S0J 603 A 1 
HETATM 8 C C11 S0J . . . D 4 -18.599 -6.917 62.727 1 44.58 ? C11 S0J 603 A 1 
HETATM 9 C C10 S0J . . . D 4 -18.358 -5.48 62.501 1 43.45 ? C10 S0J 603 A 1 
HETATM 10 C C12 S0J . . . D 4 -17.758 -7.523 61.644 1 50.24 ? C12 S0J 603 A 1 
HETATM 11 C C9 S0J . . . D 4 -16.956 -5.495 61.939 1 51.89 ? C9 S0J 603 A 1 
HETATM 12 C C1 S0J . . . D 4 -15.228 -2.586 61.517 1 62.79 ? C1 S0J 603 A 1 
HETATM 13 C C6 S0J . . . D 4 -15.494 -6.553 58.423 1 63.51 ? C6 S0J 603 A 1 
HETATM 14 C C8 S0J . . . D 4 -16.931 -5.053 60.505 1 53.19 ? C8 S0J 603 A 1 
HETATM 15 N N19 S0J . . . D 4 -13.128 -5.784 56.91 1 78.2 ? N19 S0J 603 A 1 
HETATM 16 N N7 S0J . . . D 4 -15.582 -4.662 60.075 1 62.88 ? N7 S0J 603 A 1 
HETATM 17 N N18 S0J . . . D 4 -12.248 -6.638 54.916 1 72.74 ? N18 S0J 603 A 1 
HETATM 18 O O13 S0J . . . D 4 -16.531 -6.819 61.811 1 54.46 ? O13 S0J 603 A 1 
HETATM 19 S S16 S0J . . . D 4 -10.811 -4.899 56.35 1 86.61 ? S16 S0J 603 A 1 
#
_model_server_stats.io_time_ms              46 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           19 
#