data_3WMF # _model_server_result.job_id aLnhCTRuwRG55W5lrZXFig _model_server_result.datetime_utc '2024-12-23 07:53:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wmf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 3WMF # _exptl.entry_id 3WMF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3WMF _cell.length_a 180.534 _cell.length_b 180.534 _cell.length_c 156.097 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WMF _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 90.267 52.115677 52.032333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 83 n n C40 C43 DMU sing 84 n n C37 C34 DMU sing 85 n n C34 C31 DMU sing 86 n n C31 C28 DMU sing 87 n n C28 C25 DMU sing 88 n n C22 C25 DMU sing 89 n n C22 C19 DMU sing 90 n n O61 C57 DMU sing 91 n n O4 C7 DMU sing 92 n n C18 C19 DMU sing 93 n n C18 O16 DMU sing 94 n n O5 C6 DMU sing 95 n n O5 C4 DMU sing 96 n n C57 C4 DMU sing 97 n n C6 O16 DMU sing 98 n n C6 C1 DMU sing 99 n n C7 C5 DMU sing 100 n n C7 C8 DMU sing 101 n n C4 C3 DMU sing 102 n n O1 C10 DMU sing 103 n n O1 C9 DMU sing 104 n n C10 C5 DMU sing 105 n n C10 O7 DMU sing 106 n n C5 O3 DMU sing 107 n n O49 C1 DMU sing 108 n n C8 C9 DMU sing 109 n n C8 O2 DMU sing 110 n n C1 C2 DMU sing 111 n n C11 C9 DMU sing 112 n n C11 O6 DMU sing 113 n n C3 O7 DMU sing 114 n n C3 C2 DMU sing 115 n n C2 O55 DMU sing 116 n n C1 H1 DMU sing 117 n n C2 H2 DMU sing 118 n n C3 H3 DMU sing 119 n n C4 H4 DMU sing 120 n n C6 H5 DMU sing 121 n n C18 H6 DMU sing 122 n n C18 H7 DMU sing 123 n n C19 H8 DMU sing 124 n n C19 H9 DMU sing 125 n n C22 H10 DMU sing 126 n n C22 H11 DMU sing 127 n n C25 H12 DMU sing 128 n n C25 H13 DMU sing 129 n n C28 H14 DMU sing 130 n n C28 H15 DMU sing 131 n n C31 H16 DMU sing 132 n n C31 H17 DMU sing 133 n n C34 H18 DMU sing 134 n n C34 H19 DMU sing 135 n n C37 H20 DMU sing 136 n n C37 H21 DMU sing 137 n n C40 H22 DMU sing 138 n n C40 H23 DMU sing 139 n n C43 H24 DMU sing 140 n n C43 H25 DMU sing 141 n n C43 H26 DMU sing 142 n n O49 H27 DMU sing 143 n n O55 H28 DMU sing 144 n n C57 H29 DMU sing 145 n n C57 H30 DMU sing 146 n n O61 H31 DMU sing 147 n n C5 H32 DMU sing 148 n n C7 H33 DMU sing 149 n n C8 H34 DMU sing 150 n n C9 H35 DMU sing 151 n n C10 H36 DMU sing 152 n n O2 H37 DMU sing 153 n n O3 H38 DMU sing 154 n n O4 H39 DMU sing 155 n n C11 H40 DMU sing 156 n n C11 H41 DMU sing 157 n n O6 H42 DMU sing 158 n n # _atom_sites.entry_id 3WMF _atom_sites.fract_transf_matrix[1][1] 0.005539 _atom_sites.fract_transf_matrix[1][2] 0.003198 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006396 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006406 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMU A 1 801 1 DMU DMU . C 3 HOH A 1 901 1 HOH HOH . C 3 HOH A 2 902 2 HOH HOH . C 3 HOH A 3 903 3 HOH HOH . C 3 HOH A 4 904 4 HOH HOH . C 3 HOH A 5 905 5 HOH HOH . C 3 HOH A 6 906 6 HOH HOH . C 3 HOH A 7 907 7 HOH HOH . C 3 HOH A 8 908 8 HOH HOH . C 3 HOH A 9 909 9 HOH HOH . C 3 HOH A 10 910 10 HOH HOH . C 3 HOH A 11 911 11 HOH HOH . C 3 HOH A 12 912 12 HOH HOH . C 3 HOH A 13 913 13 HOH HOH . C 3 HOH A 14 914 14 HOH HOH . C 3 HOH A 15 915 15 HOH HOH . C 3 HOH A 16 916 16 HOH HOH . C 3 HOH A 17 917 17 HOH HOH . C 3 HOH A 18 918 18 HOH HOH . C 3 HOH A 19 919 19 HOH HOH . C 3 HOH A 20 920 20 HOH HOH . C 3 HOH A 21 921 21 HOH HOH . C 3 HOH A 22 922 22 HOH HOH . C 3 HOH A 23 923 23 HOH HOH . C 3 HOH A 24 924 24 HOH HOH . C 3 HOH A 25 925 25 HOH HOH . C 3 HOH A 26 926 26 HOH HOH . C 3 HOH A 27 927 27 HOH HOH . C 3 HOH A 28 928 28 HOH HOH . C 3 HOH A 29 929 29 HOH HOH . C 3 HOH A 30 930 30 HOH HOH . C 3 HOH A 31 931 31 HOH HOH . C 3 HOH A 32 932 32 HOH HOH . C 3 HOH A 33 933 33 HOH HOH . C 3 HOH A 34 934 34 HOH HOH . C 3 HOH A 35 935 35 HOH HOH . C 3 HOH A 36 936 36 HOH HOH . C 3 HOH A 37 937 37 HOH HOH . C 3 HOH A 38 938 38 HOH HOH . C 3 HOH A 39 939 39 HOH HOH . C 3 HOH A 40 940 40 HOH HOH . C 3 HOH A 41 941 42 HOH HOH . C 3 HOH A 42 942 43 HOH HOH . C 3 HOH A 43 943 44 HOH HOH . C 3 HOH A 44 944 46 HOH HOH . C 3 HOH A 45 945 47 HOH HOH . C 3 HOH A 46 946 48 HOH HOH . C 3 HOH A 47 947 49 HOH HOH . C 3 HOH A 48 948 51 HOH HOH . C 3 HOH A 49 949 52 HOH HOH . C 3 HOH A 50 950 53 HOH HOH . C 3 HOH A 51 951 54 HOH HOH . C 3 HOH A 52 952 55 HOH HOH . C 3 HOH A 53 953 57 HOH HOH . C 3 HOH A 54 954 59 HOH HOH . C 3 HOH A 55 955 60 HOH HOH . C 3 HOH A 56 956 61 HOH HOH . C 3 HOH A 57 957 62 HOH HOH . C 3 HOH A 58 958 64 HOH HOH . C 3 HOH A 59 959 66 HOH HOH . C 3 HOH A 60 960 67 HOH HOH . C 3 HOH A 61 961 68 HOH HOH . C 3 HOH A 62 962 69 HOH HOH . C 3 HOH A 63 963 70 HOH HOH . C 3 HOH A 64 964 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . B 2 26.792 30.433 52.086 1 133.89 ? C1 DMU 801 A 1 HETATM 2 C C2 DMU . . . B 2 25.458 31.044 52.137 1 137.19 ? C2 DMU 801 A 1 HETATM 3 C C3 DMU . . . B 2 25.394 32.286 52.897 1 154.72 ? C3 DMU 801 A 1 HETATM 4 C C4 DMU . . . B 2 26.48 33.24 52.547 1 158.89 ? C4 DMU 801 A 1 HETATM 5 O O5 DMU . . . B 2 27.83 32.599 52.475 1 153.82 ? O5 DMU 801 A 1 HETATM 6 C C6 DMU . . . B 2 27.872 31.414 51.707 1 143.13 ? C6 DMU 801 A 1 HETATM 7 O O7 DMU . . . B 2 24.073 32.854 52.645 1 158.1 ? O7 DMU 801 A 1 HETATM 8 O O16 DMU . . . B 2 29.12 30.835 51.873 1 137.22 ? O16 DMU 801 A 1 HETATM 9 O O49 DMU . . . B 2 26.726 29.379 51.142 1 121.22 ? O49 DMU 801 A 1 HETATM 10 O O55 DMU . . . B 2 24.556 30.081 52.706 1 123.99 ? O55 DMU 801 A 1 HETATM 11 C C57 DMU . . . B 2 26.598 34.335 53.533 1 161.76 ? C57 DMU 801 A 1 HETATM 12 O O61 DMU . . . B 2 27.909 34.828 53.862 1 160.18 ? O61 DMU 801 A 1 HETATM 13 C C5 DMU . . . B 2 21.892 32.739 53.595 1 139.7 ? C5 DMU 801 A 1 HETATM 14 C C7 DMU . . . B 2 21.275 33.678 52.72 1 132.88 ? C7 DMU 801 A 1 HETATM 15 C C8 DMU . . . B 2 21.573 35.078 53.08 1 138.6 ? C8 DMU 801 A 1 HETATM 16 C C9 DMU . . . B 2 23.055 35.277 53.291 1 145.14 ? C9 DMU 801 A 1 HETATM 17 O O1 DMU . . . B 2 23.535 34.395 54.261 1 151.51 ? O1 DMU 801 A 1 HETATM 18 C C10 DMU . . . B 2 23.346 33.007 53.804 1 148.78 ? C10 DMU 801 A 1 HETATM 19 O O2 DMU . . . B 2 21.1 35.94 52.064 1 133.37 ? O2 DMU 801 A 1 HETATM 20 O O3 DMU . . . B 2 21.702 31.415 53.104 1 136.33 ? O3 DMU 801 A 1 HETATM 21 O O4 DMU . . . B 2 19.84 33.448 52.696 1 110.18 ? O4 DMU 801 A 1 HETATM 22 C C11 DMU . . . B 2 23.443 36.711 53.655 1 136.02 ? C11 DMU 801 A 1 HETATM 23 O O6 DMU . . . B 2 24.83 37.026 53.642 1 127.26 ? O6 DMU 801 A 1 # _model_server_stats.io_time_ms 131 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #