data_3WMX
#
_model_server_result.job_id            RMvzkJwpeXDNXzflPh5P7w 
_model_server_result.datetime_utc      '2024-10-11 03:13:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3wmx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":402}' 
#
_entry.id    3WMX 
#
_exptl.entry_id    3WMX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              119.119 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            THREONINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.47 
_cell.angle_gamma         90 
_cell.entry_id            3WMX 
_cell.length_a            91.598 
_cell.length_b            88.109 
_cell.length_c            113.597 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3WMX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,I,K,M 1 1 
B,D,G,H,J,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
#
_chem_comp.formula           'C4 H9 N O3' 
_chem_comp.formula_weight    119.119 
_chem_comp.id                THR 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              THREONINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA THR sing 365 n n 
N H THR sing 366 n n 
N H2 THR sing 367 n n 
CA C THR sing 368 n n 
CA CB THR sing 369 n n 
CA HA THR sing 370 n n 
C O THR doub 371 n n 
C OXT THR sing 372 n n 
CB OG1 THR sing 373 n n 
CB CG2 THR sing 374 n n 
CB HB THR sing 375 n n 
OG1 HG1 THR sing 376 n n 
CG2 HG21 THR sing 377 n n 
CG2 HG22 THR sing 378 n n 
CG2 HG23 THR sing 379 n n 
OXT HXT THR sing 380 n n 
#
_atom_sites.entry_id                     3WMX 
_atom_sites.fract_transf_matrix[1][1]    0.010917 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003022 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01135 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009134 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAD A 1 401 1 NAD NAD . 
F 3 THR A 1 402 1 THR THR . 
G 2 NAD B 1 401 1 NAD NAD . 
H 3 THR B 1 402 1 THR THR . 
I 2 NAD C 1 401 1 NAD NAD . 
J 2 NAD D 1 401 1 NAD NAD . 
K 4 HOH A 1 501 1 HOH HOH . 
K 4 HOH A 2 502 2 HOH HOH . 
K 4 HOH A 3 503 5 HOH HOH . 
K 4 HOH A 4 504 9 HOH HOH . 
K 4 HOH A 5 505 10 HOH HOH . 
K 4 HOH A 6 506 11 HOH HOH . 
K 4 HOH A 7 507 16 HOH HOH . 
K 4 HOH A 8 508 22 HOH HOH . 
K 4 HOH A 9 509 26 HOH HOH . 
K 4 HOH A 10 510 27 HOH HOH . 
K 4 HOH A 11 511 28 HOH HOH . 
K 4 HOH A 12 512 29 HOH HOH . 
K 4 HOH A 13 513 31 HOH HOH . 
K 4 HOH A 14 514 32 HOH HOH . 
K 4 HOH A 15 515 36 HOH HOH . 
K 4 HOH A 16 516 37 HOH HOH . 
K 4 HOH A 17 517 38 HOH HOH . 
K 4 HOH A 18 518 39 HOH HOH . 
K 4 HOH A 19 519 42 HOH HOH . 
K 4 HOH A 20 520 43 HOH HOH . 
K 4 HOH A 21 521 44 HOH HOH . 
K 4 HOH A 22 522 45 HOH HOH . 
K 4 HOH A 23 523 46 HOH HOH . 
K 4 HOH A 24 524 48 HOH HOH . 
K 4 HOH A 25 525 56 HOH HOH . 
K 4 HOH A 26 526 57 HOH HOH . 
K 4 HOH A 27 527 58 HOH HOH . 
K 4 HOH A 28 528 60 HOH HOH . 
K 4 HOH A 29 529 65 HOH HOH . 
K 4 HOH A 30 530 66 HOH HOH . 
K 4 HOH A 31 531 67 HOH HOH . 
K 4 HOH A 32 532 68 HOH HOH . 
K 4 HOH A 33 533 72 HOH HOH . 
K 4 HOH A 34 534 80 HOH HOH . 
K 4 HOH A 35 535 83 HOH HOH . 
L 4 HOH B 1 501 12 HOH HOH . 
L 4 HOH B 2 502 13 HOH HOH . 
L 4 HOH B 3 503 17 HOH HOH . 
L 4 HOH B 4 504 18 HOH HOH . 
L 4 HOH B 5 505 19 HOH HOH . 
L 4 HOH B 6 506 20 HOH HOH . 
L 4 HOH B 7 507 21 HOH HOH . 
L 4 HOH B 8 508 30 HOH HOH . 
L 4 HOH B 9 509 33 HOH HOH . 
L 4 HOH B 10 510 40 HOH HOH . 
L 4 HOH B 11 511 49 HOH HOH . 
L 4 HOH B 12 512 54 HOH HOH . 
L 4 HOH B 13 513 55 HOH HOH . 
L 4 HOH B 14 514 62 HOH HOH . 
L 4 HOH B 15 515 63 HOH HOH . 
L 4 HOH B 16 516 74 HOH HOH . 
L 4 HOH B 17 517 78 HOH HOH . 
M 4 HOH C 1 501 3 HOH HOH . 
M 4 HOH C 2 502 6 HOH HOH . 
M 4 HOH C 3 503 8 HOH HOH . 
M 4 HOH C 4 504 41 HOH HOH . 
M 4 HOH C 5 505 50 HOH HOH . 
M 4 HOH C 6 506 51 HOH HOH . 
M 4 HOH C 7 507 59 HOH HOH . 
M 4 HOH C 8 508 61 HOH HOH . 
M 4 HOH C 9 509 64 HOH HOH . 
M 4 HOH C 10 510 69 HOH HOH . 
M 4 HOH C 11 511 71 HOH HOH . 
M 4 HOH C 12 512 75 HOH HOH . 
M 4 HOH C 13 513 77 HOH HOH . 
M 4 HOH C 14 514 81 HOH HOH . 
N 4 HOH D 1 501 70 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N THR . . . H 3 9.941 -5.6 80.483 1 62.66 ? N THR 402 B 1 
HETATM 2 C CA THR . . . H 3 9.322 -6.523 81.464 1 68.85 ? CA THR 402 B 1 
HETATM 3 C C THR . . . H 3 8.917 -7.783 80.689 1 71.45 ? C THR 402 B 1 
HETATM 4 O O THR . . . H 3 9.761 -8.319 79.966 1 74.54 ? O THR 402 B 1 
HETATM 5 C CB THR . . . H 3 8.149 -5.843 82.239 1 67.82 ? CB THR 402 B 1 
HETATM 6 O OG1 THR . . . H 3 8.511 -4.502 82.629 1 45.47 ? OG1 THR 402 B 1 
HETATM 7 C CG2 THR . . . H 3 7.817 -6.613 83.503 1 66.75 ? CG2 THR 402 B 1 
HETATM 8 O OXT THR . . . H 3 7.804 -8.307 80.722 1 70.97 ? OXT THR 402 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           8 
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