data_3WPS # _model_server_result.job_id 9Ov8cyYhDvb9MfVkhMHvGw _model_server_result.datetime_utc '2024-11-14 04:48:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wps # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 3WPS # _exptl.entry_id 3WPS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3WPS _cell.length_a 77.321 _cell.length_b 77.321 _cell.length_c 108.744 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WPS _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 11 A GLY 349 1_555 A N MSE 12 A MSE 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 12 A MSE 350 1_555 A N LEU 13 A LEU 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C PRO 22 A PRO 360 1_555 A N MSE 23 A MSE 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MSE 23 A MSE 361 1_555 A N ILE 24 A ILE 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C PHE 104 A PHE 442 1_555 A N MSE 105 A MSE 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale6 A C MSE 105 A MSE 443 1_555 A N GLU 106 A GLU 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 A C ALA 119 A ALA 457 1_555 A N MSE 120 A MSE 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale8 A C MSE 120 A MSE 458 1_555 A N TYR 121 A TYR 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale9 A C LEU 138 A LEU 476 1_555 A N MSE 139 A MSE 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 A C MSE 139 A MSE 477 1_555 A N ILE 140 A ILE 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale11 A C LYS 152 A LYS 490 1_555 A N MSE 153 A MSE 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 A C MSE 153 A MSE 491 1_555 A N ASP 154 A ASP 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 A C THR 178 A THR 516 1_555 A N MSE 179 A MSE 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 A C MSE 179 A MSE 517 1_555 A N SER 180 A SER 518 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 A C PHE 204 A PHE 542 1_555 A N MSE 205 A MSE 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale16 A C MSE 205 A MSE 543 1_555 A N MSE 206 A MSE 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale17 A C MSE 206 A MSE 544 1_555 A N VAL 207 A VAL 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 B C GLY 11 B GLY 349 1_555 B N MSE 12 B MSE 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale19 B C MSE 12 B MSE 350 1_555 B N LEU 13 B LEU 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale20 B C PRO 22 B PRO 360 1_555 B N MSE 23 B MSE 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale21 B C MSE 23 B MSE 361 1_555 B N ILE 24 B ILE 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale22 B C PHE 104 B PHE 442 1_555 B N MSE 105 B MSE 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale23 B C MSE 105 B MSE 443 1_555 B N GLU 106 B GLU 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale24 B C ALA 119 B ALA 457 1_555 B N MSE 120 B MSE 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale25 B C MSE 120 B MSE 458 1_555 B N TYR 121 B TYR 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale26 B C LEU 138 B LEU 476 1_555 B N MSE 139 B MSE 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale27 B C MSE 139 B MSE 477 1_555 B N ILE 140 B ILE 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale28 B C LYS 152 B LYS 490 1_555 B N MSE 153 B MSE 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale29 B C MSE 153 B MSE 491 1_555 B N ASP 154 B ASP 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale30 B C THR 178 B THR 516 1_555 B N MSE 179 B MSE 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale31 B C MSE 179 B MSE 517 1_555 B N SER 180 B SER 518 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale32 B C PHE 204 B PHE 542 1_555 B N MSE 205 B MSE 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale33 B C MSE 205 B MSE 543 1_555 B N MSE 206 B MSE 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale34 B C MSE 206 B MSE 544 1_555 B N VAL 207 B VAL 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3WPS _atom_sites.fract_transf_matrix[1][1] 0.012933 _atom_sites.fract_transf_matrix[1][2] 0.007467 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014934 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009196 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 600 600 SO4 SO4 . D 2 SO4 B 1 601 610 SO4 SO4 . E 3 HOH A 1 701 1 HOH TIP . E 3 HOH A 2 702 2 HOH TIP . E 3 HOH A 3 703 5 HOH TIP . E 3 HOH A 4 704 6 HOH TIP . E 3 HOH A 5 705 7 HOH TIP . E 3 HOH A 6 706 10 HOH TIP . E 3 HOH A 7 707 11 HOH TIP . E 3 HOH A 8 708 12 HOH TIP . E 3 HOH A 9 709 13 HOH TIP . E 3 HOH A 10 710 14 HOH TIP . E 3 HOH A 11 711 15 HOH TIP . E 3 HOH A 12 712 18 HOH TIP . E 3 HOH A 13 713 21 HOH TIP . E 3 HOH A 14 714 22 HOH TIP . E 3 HOH A 15 715 24 HOH TIP . E 3 HOH A 16 716 25 HOH TIP . E 3 HOH A 17 717 27 HOH TIP . E 3 HOH A 18 718 28 HOH TIP . E 3 HOH A 19 719 30 HOH TIP . E 3 HOH A 20 720 31 HOH TIP . E 3 HOH A 21 721 32 HOH TIP . E 3 HOH A 22 722 33 HOH TIP . E 3 HOH A 23 723 34 HOH TIP . E 3 HOH A 24 724 35 HOH TIP . E 3 HOH A 25 725 36 HOH TIP . E 3 HOH A 26 726 37 HOH TIP . E 3 HOH A 27 727 38 HOH TIP . E 3 HOH A 28 728 40 HOH TIP . E 3 HOH A 29 729 43 HOH TIP . E 3 HOH A 30 730 44 HOH TIP . E 3 HOH A 31 731 46 HOH TIP . E 3 HOH A 32 732 48 HOH TIP . E 3 HOH A 33 733 51 HOH TIP . E 3 HOH A 34 734 54 HOH TIP . E 3 HOH A 35 735 56 HOH TIP . E 3 HOH A 36 736 60 HOH TIP . E 3 HOH A 37 737 61 HOH TIP . E 3 HOH A 38 738 62 HOH TIP . E 3 HOH A 39 739 65 HOH TIP . E 3 HOH A 40 740 67 HOH TIP . E 3 HOH A 41 741 74 HOH TIP . E 3 HOH A 42 742 76 HOH TIP . E 3 HOH A 43 743 77 HOH TIP . E 3 HOH A 44 744 80 HOH TIP . E 3 HOH A 45 745 81 HOH TIP . E 3 HOH A 46 746 84 HOH TIP . E 3 HOH A 47 747 85 HOH TIP . E 3 HOH A 48 748 86 HOH TIP . E 3 HOH A 49 749 93 HOH TIP . F 3 HOH B 1 701 3 HOH TIP . F 3 HOH B 2 702 4 HOH TIP . F 3 HOH B 3 703 8 HOH TIP . F 3 HOH B 4 704 9 HOH TIP . F 3 HOH B 5 705 16 HOH TIP . F 3 HOH B 6 706 17 HOH TIP . F 3 HOH B 7 707 19 HOH TIP . F 3 HOH B 8 708 20 HOH TIP . F 3 HOH B 9 709 23 HOH TIP . F 3 HOH B 10 710 26 HOH TIP . F 3 HOH B 11 711 29 HOH TIP . F 3 HOH B 12 712 39 HOH TIP . F 3 HOH B 13 713 41 HOH TIP . F 3 HOH B 14 714 42 HOH TIP . F 3 HOH B 15 715 45 HOH TIP . F 3 HOH B 16 716 47 HOH TIP . F 3 HOH B 17 717 49 HOH TIP . F 3 HOH B 18 718 50 HOH TIP . F 3 HOH B 19 719 52 HOH TIP . F 3 HOH B 20 720 53 HOH TIP . F 3 HOH B 21 721 55 HOH TIP . F 3 HOH B 22 722 57 HOH TIP . F 3 HOH B 23 723 58 HOH TIP . F 3 HOH B 24 724 59 HOH TIP . F 3 HOH B 25 725 63 HOH TIP . F 3 HOH B 26 726 64 HOH TIP . F 3 HOH B 27 727 66 HOH TIP . F 3 HOH B 28 728 68 HOH TIP . F 3 HOH B 29 729 69 HOH TIP . F 3 HOH B 30 730 70 HOH TIP . F 3 HOH B 31 731 71 HOH TIP . F 3 HOH B 32 732 72 HOH TIP . F 3 HOH B 33 733 73 HOH TIP . F 3 HOH B 34 734 75 HOH TIP . F 3 HOH B 35 735 78 HOH TIP . F 3 HOH B 36 736 79 HOH TIP . F 3 HOH B 37 737 82 HOH TIP . F 3 HOH B 38 738 83 HOH TIP . F 3 HOH B 39 739 87 HOH TIP . F 3 HOH B 40 740 88 HOH TIP . F 3 HOH B 41 741 89 HOH TIP . F 3 HOH B 42 742 90 HOH TIP . F 3 HOH B 43 743 91 HOH TIP . F 3 HOH B 44 744 92 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 21.93 -6.748 -8.796 1 120.24 ? S SO4 601 B 1 HETATM 2 O O1 SO4 . . . D 2 21.482 -5.542 -9.523 1 119.53 ? O1 SO4 601 B 1 HETATM 3 O O2 SO4 . . . D 2 21.19 -7.916 -9.312 1 119.71 ? O2 SO4 601 B 1 HETATM 4 O O3 SO4 . . . D 2 21.651 -6.591 -7.355 1 119.29 ? O3 SO4 601 B 1 HETATM 5 O O4 SO4 . . . D 2 23.381 -6.95 -8.999 1 118.83 ? O4 SO4 601 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #