data_3WQO # _model_server_result.job_id QJlFn_nhiSw2mZQ6lvwkog _model_server_result.datetime_utc '2025-01-03 00:36:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3wqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 3WQO # _exptl.entry_id 3WQO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3WQO _cell.length_a 97.052 _cell.length_b 102.387 _cell.length_c 132.247 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3WQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 78 A HIS 78 1_555 D MN MN . A MN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc2 A NE2 HIS 119 A HIS 119 1_555 D MN MN . A MN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc3 A OE1 GLU 159 A GLU 159 1_555 D MN MN . A MN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc4 A NE2 HIS 195 A HIS 195 1_555 C MN MN . A MN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc5 A OD2 ASP 229 A ASP 229 1_555 C MN MN . A MN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc6 A NE2 HIS 231 A HIS 231 1_555 C MN MN . A MN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc7 D MN MN . A MN 1002 1_555 G O HOH . A HOH 1118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc8 B NE2 HIS 78 B HIS 78 1_555 F MN MN . B MN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc9 B NE2 HIS 119 B HIS 119 1_555 F MN MN . B MN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc10 B OE1 GLU 159 B GLU 159 1_555 F MN MN . B MN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc11 B NE2 HIS 195 B HIS 195 1_555 E MN MN . B MN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc12 B OD2 ASP 229 B ASP 229 1_555 E MN MN . B MN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc13 B NE2 HIS 231 B HIS 231 1_555 E MN MN . B MN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3WQO _atom_sites.fract_transf_matrix[1][1] 0.010304 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009767 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007562 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 1001 1001 MN MN . D 2 MN A 1 1002 1002 MN MN . E 2 MN B 1 1001 1001 MN MN . F 2 MN B 1 1002 1002 MN MN . G 3 HOH A 1 1101 2 HOH HOH . G 3 HOH A 2 1102 3 HOH HOH . G 3 HOH A 3 1103 4 HOH HOH . G 3 HOH A 4 1104 8 HOH HOH . G 3 HOH A 5 1105 9 HOH HOH . G 3 HOH A 6 1106 11 HOH HOH . G 3 HOH A 7 1107 12 HOH HOH . G 3 HOH A 8 1108 13 HOH HOH . G 3 HOH A 9 1109 15 HOH HOH . G 3 HOH A 10 1110 16 HOH HOH . G 3 HOH A 11 1111 17 HOH HOH . G 3 HOH A 12 1112 18 HOH HOH . G 3 HOH A 13 1113 20 HOH HOH . G 3 HOH A 14 1114 21 HOH HOH . G 3 HOH A 15 1115 22 HOH HOH . G 3 HOH A 16 1116 24 HOH HOH . G 3 HOH A 17 1117 25 HOH HOH . G 3 HOH A 18 1118 26 HOH HOH . G 3 HOH A 19 1119 31 HOH HOH . G 3 HOH A 20 1120 32 HOH HOH . G 3 HOH A 21 1121 33 HOH HOH . G 3 HOH A 22 1122 34 HOH HOH . G 3 HOH A 23 1123 36 HOH HOH . G 3 HOH A 24 1124 38 HOH HOH . G 3 HOH A 25 1125 40 HOH HOH . G 3 HOH A 26 1126 41 HOH HOH . G 3 HOH A 27 1127 42 HOH HOH . G 3 HOH A 28 1128 46 HOH HOH . G 3 HOH A 29 1129 47 HOH HOH . H 3 HOH B 1 1101 1 HOH HOH . H 3 HOH B 2 1102 5 HOH HOH . H 3 HOH B 3 1103 6 HOH HOH . H 3 HOH B 4 1104 7 HOH HOH . H 3 HOH B 5 1105 10 HOH HOH . H 3 HOH B 6 1106 14 HOH HOH . H 3 HOH B 7 1107 19 HOH HOH . H 3 HOH B 8 1108 23 HOH HOH . H 3 HOH B 9 1109 27 HOH HOH . H 3 HOH B 10 1110 28 HOH HOH . H 3 HOH B 11 1111 29 HOH HOH . H 3 HOH B 12 1112 30 HOH HOH . H 3 HOH B 13 1113 35 HOH HOH . H 3 HOH B 14 1114 37 HOH HOH . H 3 HOH B 15 1115 39 HOH HOH . H 3 HOH B 16 1116 43 HOH HOH . H 3 HOH B 17 1117 44 HOH HOH . H 3 HOH B 18 1118 45 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 74.946 _atom_site.Cartn_y 40.952 _atom_site.Cartn_z 85.1 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #